RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 SZT2Q5T011 3432 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 SF3B1O75533 1304 aaKnown RBP eCLIP2.91□□□□□ -1.94
SKP1-204ENST00000517691 ZMYM2Q9UBW7 1377 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 TANC1Q9C0D5 1861 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 EVPLQ92817 2033 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 TET1Q8NFU7 2136 aa2.91□□□□□ -1.94
SKP1-204ENST00000517691 FAM95CA0A1B0GW59 222 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 TRIM49BA6NDI0 452 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 PGPEP1LA6NFU8 196 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 C2orf71A6NGG8 1288 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 ERICH4A6NGS2 130 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 HIDE1A8MVS5 230 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 H7C0S8 307 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 PPEF2O14830 753 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 AKAP3O75969 853 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 TGDSO95455 350 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 ITGB3P05106 788 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 URODP06132 367 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 APOA4P06727 396 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 THBDP07204 575 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 ADRB2P07550 413 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 SPATA31D3P0C874 917 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 CTSAP10619 480 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 EPB41P11171 864 aaKnown RBP2.9□□□□□ -1.94
SKP1-204ENST00000517691 HNRNPLP14866 589 aaKnown RBP eCLIP2.9□□□□□ -1.94
SKP1-204ENST00000517691 RPL17P18621 184 aaKnown RBP2.9□□□□□ -1.94
SKP1-204ENST00000517691 CYP3A5P20815 502 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 ADMP35318 185 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 PSMC2P35998 433 aaKnown RBP2.9□□□□□ -1.94
SKP1-204ENST00000517691 PPP1R2P41236 205 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 CD86P42081 329 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 BRCC3P46736 316 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 GLUD2P49448 558 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 CASP4P49662 377 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 PDE6CP51160 858 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 VAMP7P51809 220 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 ARL4CP56559 192 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 SESN3P58005 492 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 RBP5P82980 135 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 FKBP3Q00688 224 aaKnown RBP2.9□□□□□ -1.94
SKP1-204ENST00000517691 CYP24A1Q07973 514 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 FAPQ12884 760 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 ELAVL2Q12926 359 aaKnown RBP2.9□□□□□ -1.94
SKP1-204ENST00000517691 BFSP1Q12934 665 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 MYO1EQ12965 1108 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 CDC16Q13042 620 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 PAK1Q13153 545 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 TRPC3Q13507 836 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 CAMK1Q14012 370 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 STARD3Q14849 445 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 PDCD1Q15116 288 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 SURF1Q15526 300 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 TESK1Q15569 626 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 NAB2Q15742 525 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 SMAD2Q15796 467 aaKnown RBP2.9□□□□□ -1.94
SKP1-204ENST00000517691 ZBTB6Q15916 424 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 CLEC16AQ2KHT3 1053 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 CCDC40Q4G0X9 1142 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 HSF5Q4G112 596 aaPredicted RBP2.9□□□□□ -1.94
SKP1-204ENST00000517691 TIGD5Q53EQ6 642 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 DCAF17Q5H9S7 520 aaPredicted RBP2.9□□□□□ -1.94
SKP1-204ENST00000517691 CCDC183Q5T5S1 534 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 TCERG1LQ5VWI1 586 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 C9orf57Q5W0N0 161 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 KAZNQ674X7 775 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 PGBD2Q6P3X8 592 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 FUT10Q6P4F1 479 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 SPATA31D4Q6ZUB0 917 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 BTN2A1Q7KYR7 527 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 ADGRD2Q7Z7M1 963 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 DAAM2Q86T65 1068 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 USP37Q86T82 979 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 PALB2Q86YC2 1186 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 DENND1CQ8IV53 801 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 CCDC103Q8IW40 242 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 C12orf56Q8IXR9 622 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 EFCAB13Q8IY85 973 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 SYTL1Q8IYJ3 562 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 PLD6Q8N2A8 252 aaKnown RBP2.9□□□□□ -1.94
SKP1-204ENST00000517691 MIER2Q8N344 545 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 MRPL43Q8N983 215 aaKnown RBP2.9□□□□□ -1.94
SKP1-204ENST00000517691 TRIML1Q8N9V2 468 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 MLKLQ8NB16 471 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 SYAP1Q96A49 352 aaPredicted RBP2.9□□□□□ -1.94
SKP1-204ENST00000517691 MVB12AQ96EY5 273 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 TMEM41AQ96HV5 264 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 DHTKD1Q96HY7 919 aaPredicted RBP2.9□□□□□ -1.94
SKP1-204ENST00000517691 FAM84AQ96KN4 292 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 MFSD14AQ96MC6 490 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 FCRL3Q96P31 734 aaPredicted RBP2.9□□□□□ -1.94
SKP1-204ENST00000517691 MMS19Q96T76 1030 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 CGRRF1Q99675 332 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 BAG1Q99933 345 aaPredicted RBP2.9□□□□□ -1.94
SKP1-204ENST00000517691 TTPALQ9BTX7 342 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 LSM14BQ9BX40 385 aaKnown RBP2.9□□□□□ -1.94
SKP1-204ENST00000517691 VN1R3Q9BXE9 311 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 MTMR12Q9C0I1 747 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 CCM2LQ9NUG4 571 aaPredicted RBP2.9□□□□□ -1.94
SKP1-204ENST00000517691 DMAC2Q9NW81 257 aa2.9□□□□□ -1.94
SKP1-204ENST00000517691 MARCH5Q9NX47 278 aa2.9□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms