RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 SPATA2LQ8IUW3 424 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 TMEM151BQ8IW70 566 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 CDH26Q8IXH8 852 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 C12orf56Q8IXR9 622 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 MB21D2Q8IYB1 491 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 SLC38A6Q8IZM9 456 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 LILRA2Q8N149 483 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 FAM109AQ8N4B1 249 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 KBTBD3Q8NAB2 608 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 SLC4A11Q8NBS3 891 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 TSPAN14Q8NG11 270 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 NCOA7Q8NI08 942 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 MCOLN3Q8TDD5 553 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 TGFBRAP1Q8WUH2 860 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 ESR2Q92731 530 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 APOPT1Q96IL0 206 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 FAR2Q96K12 515 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 COG8Q96MW5 612 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 C8orf37Q96NL8 207 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 INPP4AQ96PE3 977 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 BBS4Q96RK4 519 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 RANBP9Q96S59 729 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 CHP1Q99653 195 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 ASPNQ9BXN1 380 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 TLR10Q9BXR5 811 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 YTHDF1Q9BYJ9 559 aaKnown RBP4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 TXLNGYQ9BZA5 131 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 HOXD1Q9GZZ0 328 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 ADAM7Q9H2U9 754 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 TMEM245Q9H330 911 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 EBF3Q9H4W6 596 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 ACAD9Q9H845 621 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 TRIM45Q9H8W5 580 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 UCK1Q9HA47 277 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 KCNK9Q9NPC2 374 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 ECHDC1Q9NTX5 307 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 THG1LQ9NWX6 298 aaKnown RBP4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 TMOD2Q9NZR1 351 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 ANKFY1Q9P2R3 1169 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 EBF1Q9UH73 591 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 GLS2Q9UI32 602 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 HDAC9Q9UKV0 1011 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 PPT2Q9UMR5 302 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 POLHQ9Y253 713 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 SLC45A1Q9Y2W3 748 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 CBY1Q9Y3M2 126 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 PCDHB12Q9Y5F1 795 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 PCDHA11Q9Y5I1 949 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 CLIC4Q9Y696 253 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 ABCA6Q8N139 1617 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 MAST3O60307 1309 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 UBE4BO95155 1302 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 ZNF335Q9H4Z2 1342 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 LRRC7Q96NW7 1537 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 SYCP2Q9BX26 1530 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 KNDC1Q76NI1 1749 aa4.92□□□□□ -1.62
HMGB1P19-201ENST00000517578 ADCY10Q96PN6 1610 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 SYNJ2BP-COX16A0A087WUM0 186 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 CENPXA8MT69 81 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 CLDN25C9JDP6 229 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 STX16-NPEPL1H3BU86 382 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 I3L4J1 428 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 KRIT1O00522 736 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 SH2B2O14492 632 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 RAD51BO15315 384 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 KLHL41O60662 606 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 JAK2O60674 1132 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 PSIP1O75475 530 aaKnown RBP4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 CLEC3AO75596 197 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 CAMTA2O94983 1202 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 OR6B1O95007 311 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 SNAPINO95295 136 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 PGM3O95394 542 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 CALB1P05937 261 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 GSNP06396 782 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 SMIM18P0DKX4 95 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 SRGAP2BP0DMP2 458 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 T-ENOLP0DO92 83 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 SRGNP10124 158 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 RARBP10826 455 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 THRAP10827 490 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 KRT10P13645 584 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 NME1P15531 152 aaKnown RBP4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 IMPDH1P20839 514 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 MUTP22033 750 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 CXCR2P25025 360 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 CTNNA2P26232 953 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 RPA1P27694 616 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 HTR7P34969 479 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 TALDO1P37837 337 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 BUD31P41223 144 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 PTPN9P43378 593 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 PHKA1P46020 1223 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 SERPINB10P48595 397 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 GDI2P50395 445 aaKnown RBP4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 SLC26A2P50443 739 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 SLC5A3P53794 718 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 AP1S2P56377 157 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 GPR85P60893 370 aa4.91□□□□□ -1.62
HMGB1P19-201ENST00000517578 MRPS9P82933 396 aaKnown RBP4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms