RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 C1orf232A0A0U1RR37 186 aa13.06□□□□□ -0.32
SMAD1-215ENST00000515385 BCLAF3A2AJT9 711 aaKnown RBP13.06□□□□□ -0.32
SMAD1-215ENST00000515385 SPDYE2BA6NHP3 402 aa13.06□□□□□ -0.32
SMAD1-215ENST00000515385 TTC34A8MYJ7 566 aa13.06□□□□□ -0.32
SMAD1-215ENST00000515385 CLDN25C9JDP6 229 aa13.06□□□□□ -0.32
SMAD1-215ENST00000515385 MSL3P1P0C860 447 aa13.06□□□□□ -0.32
SMAD1-215ENST00000515385 SPDYE6P0CI01 402 aa13.06□□□□□ -0.32
SMAD1-215ENST00000515385 KRT3P12035 628 aa13.06□□□□□ -0.32
SMAD1-215ENST00000515385 YWHABP31946 246 aaKnown RBP13.06□□□□□ -0.32
SMAD1-215ENST00000515385 MSX2P35548 267 aaPredicted RBP13.06□□□□□ -0.32
SMAD1-215ENST00000515385 DPP6P42658 865 aa13.06□□□□□ -0.32
SMAD1-215ENST00000515385 TUBA1BP68363 451 aa13.06□□□□□ -0.32
SMAD1-215ENST00000515385 PRAMEP78395 509 aa13.06□□□□□ -0.32
SMAD1-215ENST00000515385 OCA2Q04671 838 aa13.06□□□□□ -0.32
SMAD1-215ENST00000515385 PRKCQQ04759 706 aa13.06□□□□□ -0.32
SMAD1-215ENST00000515385 NIPAL4Q0D2K0 466 aa13.06□□□□□ -0.32
SMAD1-215ENST00000515385 MERTKQ12866 999 aa13.06□□□□□ -0.32
SMAD1-215ENST00000515385 SPDYE2Q495Y8 402 aa13.06□□□□□ -0.32
SMAD1-215ENST00000515385 FAM102BQ5T8I3 360 aa13.06□□□□□ -0.32
SMAD1-215ENST00000515385 SEL1L3Q68CR1 1132 aa13.06□□□□□ -0.32
SMAD1-215ENST00000515385 CHSY3Q70JA7 882 aa13.06□□□□□ -0.32
SMAD1-215ENST00000515385 TUBA1AQ71U36 451 aa13.06□□□□□ -0.32
SMAD1-215ENST00000515385 ATP6V0D2Q8N8Y2 350 aa13.06□□□□□ -0.32
SMAD1-215ENST00000515385 SLC4A11Q8NBS3 891 aa13.06□□□□□ -0.32
SMAD1-215ENST00000515385 CIB1Q99828 191 aa13.06□□□□□ -0.32
SMAD1-215ENST00000515385 MXRA8Q9BRK3 442 aa13.06□□□□□ -0.32
SMAD1-215ENST00000515385 KLHL25Q9H0H3 589 aa13.06□□□□□ -0.32
SMAD1-215ENST00000515385 UNC93B1Q9H1C4 597 aa13.06□□□□□ -0.32
SMAD1-215ENST00000515385 RNPEPQ9H4A4 650 aa13.06□□□□□ -0.32
SMAD1-215ENST00000515385 ANKEF1Q9NU02 776 aa13.06□□□□□ -0.32
SMAD1-215ENST00000515385 C20orf96Q9NUD7 363 aaPredicted RBP13.06□□□□□ -0.32
SMAD1-215ENST00000515385 ADA2Q9NZK5 511 aa13.06□□□□□ -0.32
SMAD1-215ENST00000515385 TMEM216Q9P0N5 145 aa13.06□□□□□ -0.32
SMAD1-215ENST00000515385 ARHGAP28Q9P2N2 729 aa13.06□□□□□ -0.32
SMAD1-215ENST00000515385 ADAM28Q9UKQ2 775 aa13.06□□□□□ -0.32
SMAD1-215ENST00000515385 PSME2Q9UL46 239 aa13.06□□□□□ -0.32
SMAD1-215ENST00000515385 PCDHAC2Q9Y5I4 1007 aa13.06□□□□□ -0.32
SMAD1-215ENST00000515385 H0YCG3 227 aa13.05□□□□□ -0.32
SMAD1-215ENST00000515385 KCNN4O15554 427 aa13.05□□□□□ -0.32
SMAD1-215ENST00000515385 TRIM13O60858 407 aa13.05□□□□□ -0.32
SMAD1-215ENST00000515385 ENDOD1O94919 500 aa13.05□□□□□ -0.32
SMAD1-215ENST00000515385 VNN1O95497 513 aa13.05□□□□□ -0.32
SMAD1-215ENST00000515385 CPNE6O95741 557 aa13.05□□□□□ -0.32
SMAD1-215ENST00000515385 CFBP00751 764 aa13.05□□□□□ -0.32
SMAD1-215ENST00000515385 APRTP07741 180 aa13.05□□□□□ -0.32
SMAD1-215ENST00000515385 HSPA1AP0DMV8 641 aaKnown RBP13.05□□□□□ -0.32
SMAD1-215ENST00000515385 HSPA1BP0DMV9 641 aaKnown RBP13.05□□□□□ -0.32
SMAD1-215ENST00000515385 SSTR3P32745 418 aaPredicted RBP13.05□□□□□ -0.32
SMAD1-215ENST00000515385 PSME3P61289 254 aa13.05□□□□□ -0.32
SMAD1-215ENST00000515385 MAPRE2Q15555 327 aa13.05□□□□□ -0.32
SMAD1-215ENST00000515385 SLC36A3Q495N2 470 aa13.05□□□□□ -0.32
SMAD1-215ENST00000515385 KCNT1Q5JUK3 1230 aa13.05□□□□□ -0.32
SMAD1-215ENST00000515385 C6orf183Q5T699 404 aa13.05□□□□□ -0.32
SMAD1-215ENST00000515385 KCTD8Q6ZWB6 473 aa13.05□□□□□ -0.32
SMAD1-215ENST00000515385 NEK10Q6ZWH5 1172 aa13.05□□□□□ -0.32
SMAD1-215ENST00000515385 ILDR2Q71H61 639 aa13.05□□□□□ -0.32
SMAD1-215ENST00000515385 NIPA1Q7RTP0 329 aa13.05□□□□□ -0.32
SMAD1-215ENST00000515385 ITIH5Q86UX2 942 aa13.05□□□□□ -0.32
SMAD1-215ENST00000515385 C4orf19Q8IY42 314 aa13.05□□□□□ -0.32
SMAD1-215ENST00000515385 ANKRD13AQ8IZ07 590 aa13.05□□□□□ -0.32
SMAD1-215ENST00000515385 CADM3Q8N126 398 aa13.05□□□□□ -0.32
SMAD1-215ENST00000515385 TMCO5AQ8N6Q1 288 aa13.05□□□□□ -0.32
SMAD1-215ENST00000515385 ARFGAP1Q8N6T3 406 aa13.05□□□□□ -0.32
SMAD1-215ENST00000515385 OR13F1Q8NGS4 319 aa13.05□□□□□ -0.32
SMAD1-215ENST00000515385 MAPK15Q8TD08 544 aa13.05□□□□□ -0.32
SMAD1-215ENST00000515385 S100ZQ8WXG8 99 aa13.05□□□□□ -0.32
SMAD1-215ENST00000515385 HPS1Q92902 700 aa13.05□□□□□ -0.32
SMAD1-215ENST00000515385 ACO2Q99798 780 aaKnown RBP13.05□□□□□ -0.32
SMAD1-215ENST00000515385 ADI1Q9BV57 179 aa13.05□□□□□ -0.32
SMAD1-215ENST00000515385 NANOGQ9H9S0 305 aa13.05□□□□□ -0.32
SMAD1-215ENST00000515385 APOBEC3GQ9HC16 384 aaKnown RBP13.05□□□□□ -0.32
SMAD1-215ENST00000515385 SARDHQ9UL12 918 aa13.05□□□□□ -0.32
SMAD1-215ENST00000515385 HEATR9A2RTY3 570 aa13.04□□□□□ -0.32
SMAD1-215ENST00000515385 DGKIO75912 1065 aa13.04□□□□□ -0.32
SMAD1-215ENST00000515385 TOMM70O94826 608 aa13.04□□□□□ -0.32
SMAD1-215ENST00000515385 CSPG5O95196 566 aa13.04□□□□□ -0.32
SMAD1-215ENST00000515385 TGM2P21980 687 aa13.04□□□□□ -0.32
SMAD1-215ENST00000515385 RFC1P35251 1148 aaPredicted RBP13.04□□□□□ -0.32
SMAD1-215ENST00000515385 STX5Q13190 355 aa13.04□□□□□ -0.32
SMAD1-215ENST00000515385 PDK2Q15119 407 aa13.04□□□□□ -0.32
SMAD1-215ENST00000515385 ERMP1Q7Z2K6 904 aa13.04□□□□□ -0.32
SMAD1-215ENST00000515385 MMAAQ8IVH4 418 aaKnown RBP13.04□□□□□ -0.32
SMAD1-215ENST00000515385 RNF148Q8N7C7 305 aa13.04□□□□□ -0.32
SMAD1-215ENST00000515385 SNX31Q8N9S9 440 aa13.04□□□□□ -0.32
SMAD1-215ENST00000515385 SLC43A3Q8NBI5 491 aa13.04□□□□□ -0.32
SMAD1-215ENST00000515385 ZSCAN18Q8TBC5 510 aaPredicted RBP13.04□□□□□ -0.32
SMAD1-215ENST00000515385 SEPT8Q92599 483 aa13.04□□□□□ -0.32
SMAD1-215ENST00000515385 SLCO4A1Q96BD0 722 aa13.04□□□□□ -0.32
SMAD1-215ENST00000515385 FEM1CQ96JP0 617 aa13.04□□□□□ -0.32
SMAD1-215ENST00000515385 CALN1Q9BXU9 219 aa13.04□□□□□ -0.32
SMAD1-215ENST00000515385 UPF3AQ9H1J1 476 aaKnown RBP13.04□□□□□ -0.32
SMAD1-215ENST00000515385 RMND5AQ9H871 391 aa13.04□□□□□ -0.32
SMAD1-215ENST00000515385 NOL11Q9H8H0 719 aaKnown RBP13.04□□□□□ -0.32
SMAD1-215ENST00000515385 RBAKQ9NYW8 714 aaPredicted RBP13.04□□□□□ -0.32
SMAD1-215ENST00000515385 PKD2L2Q9NZM6 624 aa13.04□□□□□ -0.32
SMAD1-215ENST00000515385 CNOT6Q9ULM6 557 aaKnown RBP13.04□□□□□ -0.32
SMAD1-215ENST00000515385 CDYLQ9Y232 598 aa13.04□□□□□ -0.32
SMAD1-215ENST00000515385 ATP11BQ9Y2G3 1177 aa13.04□□□□□ -0.32
SMAD1-215ENST00000515385 TMX2-CTNND1H3BSU7 103 aa13.04□□□□□ -0.32
SMAD1-215ENST00000515385 HNRNPDLO14979 420 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms