RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 DHX35Q9H5Z1 703 aaKnown RBP7.34□□□□□ -1.23
PDLIM5-215ENST00000511586 CATSPERBQ9H7T0 1116 aa7.34□□□□□ -1.23
PDLIM5-215ENST00000511586 FBRSQ9HAH7 460 aa7.34□□□□□ -1.23
PDLIM5-215ENST00000511586 TMEM248Q9NWD8 314 aa7.34□□□□□ -1.23
PDLIM5-215ENST00000511586 GPATCH2LQ9NWQ4 482 aa7.34□□□□□ -1.23
PDLIM5-215ENST00000511586 DONSONQ9NYP3 566 aa7.34□□□□□ -1.23
PDLIM5-215ENST00000511586 ZNF212Q9UDV6 495 aa7.34□□□□□ -1.23
PDLIM5-215ENST00000511586 SLC25A13Q9UJS0 675 aa7.34□□□□□ -1.23
PDLIM5-215ENST00000511586 VPS28Q9UK41 221 aa7.34□□□□□ -1.23
PDLIM5-215ENST00000511586 RAB23Q9ULC3 237 aa7.34□□□□□ -1.23
PDLIM5-215ENST00000511586 ZKSCAN5Q9Y2L8 839 aa7.34□□□□□ -1.23
PDLIM5-215ENST00000511586 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.34□□□□□ -1.23
PDLIM5-215ENST00000511586 MUC6Q6W4X9 2439 aa7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 A0A0D9SEW6 157 aa7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 EDDM13A0A1B0GTR0 161 aa7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 TARSL2A2RTX5 802 aaKnown RBP7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 WASH4PA8MWX3 477 aa7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 EEF2KO00418 725 aaKnown RBP7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 FGF10O15520 208 aaPredicted RBP7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 DAPK3O43293 454 aa7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 ZNF217O75362 1048 aa7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 PROSCO94903 275 aa7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 IPO7O95373 1038 aaKnown RBP7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 LCA5LO95447 670 aa7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 HLA-EP13747 358 aa7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 NDUFV2P19404 249 aa7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 P2RY2P41231 377 aa7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 ARHGAP25P42331 645 aa7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 SSR1P43307 286 aaKnown RBP7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 MAGEA1P43355 309 aa7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 HCAR3P49019 387 aa7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 NUMBP49757 651 aa7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 STK19P49842 368 aaPredicted RBP7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 ZNF135P52742 658 aaPredicted RBP7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 GSDMDP57764 484 aa7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 TPI1P60174 286 aa7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 SEMA3BQ13214 749 aa7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 POLD3Q15054 466 aaPredicted RBP7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 CA9Q16790 459 aa7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 HADHQ16836 314 aaKnown RBP7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 HNRNPA1L2Q32P51 320 aaKnown RBP7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 ACCSLQ4AC99 568 aa7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 DAB2IPQ5VWQ8 1189 aa7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 IL31Q6EBC2 164 aa7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 KIAA1324Q6UXG2 1013 aaKnown RBP7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 PRR23BQ6ZRT6 265 aa7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 CYP4V2Q6ZWL3 525 aaPredicted RBP7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 C11orf74Q86VG3 221 aa7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 TMPRSS6Q8IU80 811 aa7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 ZNF366Q8N895 744 aa7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 RTL3Q8N8U3 475 aaKnown RBP7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 SUMF1Q8NBK3 374 aa7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 OR2T3Q8NH03 318 aa7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 TEKT4Q8WW24 435 aa7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 RFFLQ8WZ73 363 aa7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 PRCCQ92733 491 aaPredicted RBP7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 SIPA1Q96FS4 1042 aa7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 SPACA7Q96KW9 195 aa7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 PSMB7Q99436 277 aa7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 BAG1Q99933 345 aaPredicted RBP7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 SPON2Q9BUD6 331 aa7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 MAGEH1Q9H213 219 aa7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 ZWILCHQ9H900 591 aa7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 PRDM16Q9HAZ2 1276 aa7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 ATP13A1Q9HD20 1204 aa7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 OSGEPQ9NPF4 335 aa7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 LUC7LQ9NQ29 371 aaKnown RBP7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 PRSS16Q9NQE7 514 aa7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 NDFIP2Q9NV92 336 aa7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 DNAI1Q9UI46 699 aa7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 VPS51Q9UID3 782 aa7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 SLCO3A1Q9UIG8 710 aa7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 HPCAL4Q9UM19 191 aa7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 NEU3Q9UQ49 428 aa7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 INVSQ9Y283 1065 aa7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 PCDHA13Q9Y5I0 950 aa7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 EPN1Q9Y6I3 576 aaPredicted RBP7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 CACNA1HO95180 2353 aa7.33□□□□□ -1.24
PDLIM5-215ENST00000511586 PRR23AA6NEV1 266 aa7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 SOWAHDA6NJG2 315 aa7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 TTC34A8MYJ7 566 aa7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 H3BRJ5 948 aa7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 CBX4O00257 560 aa7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 DCLK1O15075 740 aa7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 MAP3K13O43283 966 aa7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 NRDCO43847 1150 aa7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 ATP9BO43861 1147 aa7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 GFRA3O60609 400 aa7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 SNAP91O60641 907 aa7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 RAMP2O60895 175 aa7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 RNASEH1O60930 286 aaKnown RBP7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 SIN3BO75182 1162 aa7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 MTA2O94776 668 aa7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 RHOBTB1O94844 696 aa7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 NDUFA10O95299 355 aa7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 RARAP10276 462 aa7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 C7P10643 843 aa7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 ACADMP11310 421 aa7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 IL1R2P27930 398 aa7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 MAN1A1P33908 653 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms