RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 LMAN1LQ9HAT1 526 aa6.1□□□□□ -1.43
GYPB-212ENST00000511198 CASS4Q9NQ75 786 aa6.1□□□□□ -1.43
GYPB-212ENST00000511198 FOXJ2Q9P0K8 574 aa6.1□□□□□ -1.43
GYPB-212ENST00000511198 ADD3Q9UEY8 706 aaKnown RBP6.1□□□□□ -1.43
GYPB-212ENST00000511198 NDRG2Q9UN36 371 aaKnown RBP6.1□□□□□ -1.43
GYPB-212ENST00000511198 PCNX1Q96RV3 2341 aa6.1□□□□□ -1.43
GYPB-212ENST00000511198 NRCAMQ92823 1304 aa6.09□□□□□ -1.43
GYPB-212ENST00000511198 LOC102724159A0A0B4J2E5 919 aa6.09□□□□□ -1.43
GYPB-212ENST00000511198 SLC43A1O75387 559 aa6.09□□□□□ -1.43
GYPB-212ENST00000511198 CAVIN2O95810 425 aa6.09□□□□□ -1.43
GYPB-212ENST00000511198 SMIM10L2AP0DMW4 78 aa6.09□□□□□ -1.43
GYPB-212ENST00000511198 SMIM10L2BP0DMW5 78 aa6.09□□□□□ -1.43
GYPB-212ENST00000511198 MTHFD1P11586 935 aaKnown RBP6.09□□□□□ -1.43
GYPB-212ENST00000511198 IBSPP21815 317 aaPredicted RBP6.09□□□□□ -1.43
GYPB-212ENST00000511198 CD52P31358 61 aa6.09□□□□□ -1.43
GYPB-212ENST00000511198 IL15P40933 162 aaPredicted RBP6.09□□□□□ -1.43
GYPB-212ENST00000511198 KRT17Q04695 432 aa6.09□□□□□ -1.43
GYPB-212ENST00000511198 TLE1Q04724 770 aa6.09□□□□□ -1.43
GYPB-212ENST00000511198 PWP2Q15269 919 aaKnown RBP6.09□□□□□ -1.43
GYPB-212ENST00000511198 ZNF362Q5T0B9 420 aaPredicted RBP6.09□□□□□ -1.43
GYPB-212ENST00000511198 ZNF852Q6ZMS4 543 aa6.09□□□□□ -1.43
GYPB-212ENST00000511198 WDR5BQ86VZ2 330 aa6.09□□□□□ -1.43
GYPB-212ENST00000511198 MARCH9Q86YJ5 346 aa6.09□□□□□ -1.43
GYPB-212ENST00000511198 COLGALT2Q8IYK4 626 aa6.09□□□□□ -1.43
GYPB-212ENST00000511198 PNPLA1Q8N8W4 532 aa6.09□□□□□ -1.43
GYPB-212ENST00000511198 KAT5Q92993 513 aa6.09□□□□□ -1.43
GYPB-212ENST00000511198 CLPTM1LQ96KA5 538 aa6.09□□□□□ -1.43
GYPB-212ENST00000511198 AIFM2Q9BRQ8 373 aa6.09□□□□□ -1.43
GYPB-212ENST00000511198 SLC32A1Q9H598 525 aa6.09□□□□□ -1.43
GYPB-212ENST00000511198 JKAMPQ9P055 326 aa6.09□□□□□ -1.43
GYPB-212ENST00000511198 FEM1BQ9UK73 627 aa6.09□□□□□ -1.43
GYPB-212ENST00000511198 PA2G4Q9UQ80 394 aaKnown RBP6.09□□□□□ -1.43
GYPB-212ENST00000511198 MRFAP1Q9Y605 127 aa6.09□□□□□ -1.43
GYPB-212ENST00000511198 COX11Q9Y6N1 276 aa6.09□□□□□ -1.43
GYPB-212ENST00000511198 CELSR1Q9NYQ6 3014 aa6.08□□□□□ -1.44
GYPB-212ENST00000511198 AHCTF1Q8WYP5 2266 aa6.08□□□□□ -1.44
GYPB-212ENST00000511198 CCDC195A0A1B0GUA6 201 aa6.08□□□□□ -1.44
GYPB-212ENST00000511198 MGST3O14880 152 aa6.08□□□□□ -1.44
GYPB-212ENST00000511198 PAPSS2O95340 614 aaPredicted RBP6.08□□□□□ -1.44
GYPB-212ENST00000511198 SCG2P13521 617 aa6.08□□□□□ -1.44
GYPB-212ENST00000511198 CA8P35219 290 aa6.08□□□□□ -1.44
GYPB-212ENST00000511198 RDXP35241 583 aaKnown RBP6.08□□□□□ -1.44
GYPB-212ENST00000511198 RARRES1P49788 294 aa6.08□□□□□ -1.44
GYPB-212ENST00000511198 SEMA3BQ13214 749 aa6.08□□□□□ -1.44
GYPB-212ENST00000511198 RAB39AQ14964 217 aa6.08□□□□□ -1.44
GYPB-212ENST00000511198 ERCC6LQ2NKX8 1250 aa6.08□□□□□ -1.44
GYPB-212ENST00000511198 SP5Q6BEB4 398 aaPredicted RBP6.08□□□□□ -1.44
GYPB-212ENST00000511198 CMASQ8NFW8 434 aaPredicted RBP6.08□□□□□ -1.44
GYPB-212ENST00000511198 EXOC6Q8TAG9 804 aa6.08□□□□□ -1.44
GYPB-212ENST00000511198 SSH3Q8TE77 659 aa6.08□□□□□ -1.44
GYPB-212ENST00000511198 NSUN6Q8TEA1 469 aaKnown RBP6.08□□□□□ -1.44
GYPB-212ENST00000511198 ADAMTS14Q8WXS8 1223 aa6.08□□□□□ -1.44
GYPB-212ENST00000511198 STAMQ92783 540 aa6.08□□□□□ -1.44
GYPB-212ENST00000511198 PDLIM2Q96JY6 352 aa6.08□□□□□ -1.44
GYPB-212ENST00000511198 ZC3H10Q96K80 434 aaKnown RBP6.08□□□□□ -1.44
GYPB-212ENST00000511198 CCDC17Q96LX7 622 aa6.08□□□□□ -1.44
GYPB-212ENST00000511198 KLHL32Q96NJ5 620 aa6.08□□□□□ -1.44
GYPB-212ENST00000511198 C16orf70Q9BSU1 422 aa6.08□□□□□ -1.44
GYPB-212ENST00000511198 PIH1D3Q9NQM4 214 aaKnown RBP6.08□□□□□ -1.44
GYPB-212ENST00000511198 HEBP1Q9NRV9 189 aa6.08□□□□□ -1.44
GYPB-212ENST00000511198 SETD4Q9NVD3 440 aa6.08□□□□□ -1.44
GYPB-212ENST00000511198 MCM9Q9NXL9 1143 aa6.08□□□□□ -1.44
GYPB-212ENST00000511198 KCTD5Q9NXV2 234 aa6.08□□□□□ -1.44
GYPB-212ENST00000511198 CALCOCO1Q9P1Z2 691 aa6.08□□□□□ -1.44
GYPB-212ENST00000511198 PTGFRNQ9P2B2 879 aa6.08□□□□□ -1.44
GYPB-212ENST00000511198 CTTNBP2NLQ9P2B4 639 aa6.08□□□□□ -1.44
GYPB-212ENST00000511198 SWAP70Q9UH65 585 aa6.08□□□□□ -1.44
GYPB-212ENST00000511198 SLC45A2Q9UMX9 530 aa6.08□□□□□ -1.44
GYPB-212ENST00000511198 BOD1L1Q8NFC6 3051 aa6.08□□□□□ -1.44
GYPB-212ENST00000511198 MUC22E2RYF6 1773 aaPredicted RBP6.08□□□□□ -1.44
GYPB-212ENST00000511198 PTPRBP23467 1997 aa6.07□□□□□ -1.44
GYPB-212ENST00000511198 MYH8P13535 1937 aa6.07□□□□□ -1.44
GYPB-212ENST00000511198 CACNA1DQ01668 2161 aa6.07□□□□□ -1.44
GYPB-212ENST00000511198 A0A1W2PS29 197 aa6.07□□□□□ -1.44
GYPB-212ENST00000511198 BCLAF3A2AJT9 711 aaKnown RBP6.07□□□□□ -1.44
GYPB-212ENST00000511198 TRABD2BA6NFA1 517 aa6.07□□□□□ -1.44
GYPB-212ENST00000511198 ALG1L2C9J202 215 aa6.07□□□□□ -1.44
GYPB-212ENST00000511198 RPP40O75818 363 aaKnown RBP6.07□□□□□ -1.44
GYPB-212ENST00000511198 CD1AP06126 327 aa6.07□□□□□ -1.44
GYPB-212ENST00000511198 CHRNB1P11230 501 aa6.07□□□□□ -1.44
GYPB-212ENST00000511198 ADSSP30520 456 aa6.07□□□□□ -1.44
GYPB-212ENST00000511198 PXNP49023 591 aaPredicted RBP6.07□□□□□ -1.44
GYPB-212ENST00000511198 CLCN4P51793 760 aa6.07□□□□□ -1.44
GYPB-212ENST00000511198 ADKP55263 362 aaKnown RBP6.07□□□□□ -1.44
GYPB-212ENST00000511198 IRX4P78413 519 aa6.07□□□□□ -1.44
GYPB-212ENST00000511198 DSC2Q02487 901 aa6.07□□□□□ -1.44
GYPB-212ENST00000511198 TFCP2Q12800 502 aa6.07□□□□□ -1.44
GYPB-212ENST00000511198 TAF1BQ53T94 588 aaPredicted RBP6.07□□□□□ -1.44
GYPB-212ENST00000511198 FBXO42Q6P3S6 717 aa6.07□□□□□ -1.44
GYPB-212ENST00000511198 SLC30A10Q6XR72 485 aa6.07□□□□□ -1.44
GYPB-212ENST00000511198 TSHZ1Q6ZSZ6 1077 aa6.07□□□□□ -1.44
GYPB-212ENST00000511198 SEPT14Q6ZU15 432 aa6.07□□□□□ -1.44
GYPB-212ENST00000511198 RD3Q7Z3Z2 195 aa6.07□□□□□ -1.44
GYPB-212ENST00000511198 TMC8Q8IU68 726 aa6.07□□□□□ -1.44
GYPB-212ENST00000511198 SPEM1Q8N4L4 309 aa6.07□□□□□ -1.44
GYPB-212ENST00000511198 UBE2Q2Q8WVN8 375 aa6.07□□□□□ -1.44
GYPB-212ENST00000511198 ZNF707Q96C28 371 aaPredicted RBP6.07□□□□□ -1.44
GYPB-212ENST00000511198 NEUROD6Q96NK8 337 aa6.07□□□□□ -1.44
GYPB-212ENST00000511198 RIOK1Q9BRS2 568 aaKnown RBP6.07□□□□□ -1.44
GYPB-212ENST00000511198 SLC13A1Q9BZW2 595 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms