RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 PCDHA11Q9Y5I1 949 aa8.51□□□□□ -1.05
HTT-208ENST00000510626 AP4B1Q9Y6B7 739 aa8.51□□□□□ -1.05
HTT-208ENST00000510626 NFKB1P19838 968 aa8.51□□□□□ -1.05
HTT-208ENST00000510626 PAICSP22234 425 aaKnown RBP8.51□□□□□ -1.05
HTT-208ENST00000510626 ZNF276Q8N554 614 aa8.51□□□□□ -1.05
HTT-208ENST00000510626 ETNPPLQ8TBG4 499 aa8.51□□□□□ -1.05
HTT-208ENST00000510626 TEFMQ96QE5 360 aaKnown RBP8.51□□□□□ -1.05
HTT-208ENST00000510626 RNPEPQ9H4A4 650 aa8.51□□□□□ -1.05
HTT-208ENST00000510626 GNG14A0A1W2PPG7 69 aa8.51□□□□□ -1.05
HTT-208ENST00000510626 TRIM38O00635 465 aa8.51□□□□□ -1.05
HTT-208ENST00000510626 HBP1O60381 514 aa8.51□□□□□ -1.05
HTT-208ENST00000510626 DHFRP00374 187 aa8.51□□□□□ -1.05
HTT-208ENST00000510626 HMGCRP04035 888 aa8.51□□□□□ -1.05
HTT-208ENST00000510626 SMTNL2Q2TAL5 461 aa8.51□□□□□ -1.05
HTT-208ENST00000510626 RFTN2Q52LD8 501 aaPredicted RBP8.51□□□□□ -1.05
HTT-208ENST00000510626 GLRA4Q5JXX5 417 aa8.51□□□□□ -1.05
HTT-208ENST00000510626 ZNF549Q6P9A3 640 aa8.51□□□□□ -1.05
HTT-208ENST00000510626 POLNQ7Z5Q5 900 aa8.51□□□□□ -1.05
HTT-208ENST00000510626 ATP6V0D2Q8N8Y2 350 aa8.51□□□□□ -1.05
HTT-208ENST00000510626 C12orf66Q96MD2 445 aa8.51□□□□□ -1.05
HTT-208ENST00000510626 ZNF446Q9NWS9 450 aa8.51□□□□□ -1.05
HTT-208ENST00000510626 VPS51Q9UID3 782 aa8.51□□□□□ -1.05
HTT-208ENST00000510626 SGTAO43765 313 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 ORC5O43913 435 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 C16orf62Q7Z3J2 963 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 ATL1Q8WXF7 558 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 MXRA8Q9BRK3 442 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 APOL5Q9BWW9 433 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 NFKBIL1Q9UBC1 381 aaPredicted RBP8.5□□□□□ -1.05
HTT-208ENST00000510626 MINPP1Q9UNW1 487 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 GLI2P10070 1586 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 FOXN3O00409 490 aaPredicted RBP8.5□□□□□ -1.05
HTT-208ENST00000510626 RGS14O43566 566 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 SSNA1O43805 119 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 OVGP1Q12889 678 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 C12orf56Q8IXR9 622 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 OR52L1Q8NGH7 329 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 ACTL9Q8TC94 416 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 COX4I1P13073 169 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 TIE1P35590 1138 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 CAMK2GQ13555 558 aaPredicted RBP8.5□□□□□ -1.05
HTT-208ENST00000510626 GOLGA7BQ2TAP0 167 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 TXNDC11Q6PKC3 985 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 EMC1Q8N766 993 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 RFT1Q96AA3 541 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 C7orf26Q96N11 449 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 SLITRK1Q96PX8 696 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 TCEAL7Q9BRU2 100 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 SFMBT1Q9UHJ3 866 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 DFNA5O60443 496 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 RPN2P04844 631 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 DDI2Q5TDH0 399 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 ZNF57Q68EA5 555 aaPredicted RBP8.5□□□□□ -1.05
HTT-208ENST00000510626 TDRPQ86YL5 185 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 ERI1Q8IV48 349 aaKnown RBP8.5□□□□□ -1.05
HTT-208ENST00000510626 FAXDC2Q96IV6 333 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 DYRK1BQ9Y463 629 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 DHRS12A0PJE2 317 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 ITGAXP20702 1163 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 NIPA1Q7RTP0 329 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 POC5Q8NA72 575 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 IFT80Q9P2H3 777 aaPredicted RBP8.5□□□□□ -1.05
HTT-208ENST00000510626 ZC3H4Q9UPT8 1303 aaKnown RBP8.5□□□□□ -1.05
HTT-208ENST00000510626 TNS3Q68CZ2 1445 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 EPC2Q52LR7 807 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 RBM44Q6ZP01 1051 aaKnown RBP8.5□□□□□ -1.05
HTT-208ENST00000510626 RPRD1AQ96P16 312 aaPredicted RBP8.5□□□□□ -1.05
HTT-208ENST00000510626 ERMAPQ96PL5 475 aaPredicted RBP8.5□□□□□ -1.05
HTT-208ENST00000510626 MTG1Q9BT17 334 aaPredicted RBP8.5□□□□□ -1.05
HTT-208ENST00000510626 MAGEL2Q9UJ55 1249 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 CRLS1Q9UJA2 301 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 MAGI3Q5TCQ9 1506 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 TRIM43BA6NCK2 446 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.5□□□□□ -1.05
HTT-208ENST00000510626 AUHQ13825 339 aaKnown RBP8.5□□□□□ -1.05
HTT-208ENST00000510626 NR6A1Q15406 480 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 KRT77Q7Z794 578 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 KCNMB4Q86W47 210 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 FNDC5Q8NAU1 212 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 AGAP3Q96P47 875 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 ZNF624Q9P2J8 865 aaPredicted RBP8.5□□□□□ -1.05
HTT-208ENST00000510626 CHORDC1Q9UHD1 332 aaPredicted RBP8.5□□□□□ -1.05
HTT-208ENST00000510626 UBQLN1Q9UMX0 589 aaKnown RBP8.5□□□□□ -1.05
HTT-208ENST00000510626 SNX7Q9UNH6 387 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 IQSEC2Q5JU85 1478 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 CCDC189A1A4V9 331 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 RBAK-RBAKDNI3L0D1 243 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 FEN1P39748 380 aaKnown RBP8.5□□□□□ -1.05
HTT-208ENST00000510626 UBXN2AP68543 259 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 DLG1Q12959 904 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 PAGE2BQ5JRK9 111 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 THRSPQ92748 146 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 SPON2Q9BUD6 331 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 DPY30Q9C005 99 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 C1orf21Q9H246 121 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 S100A14Q9HCY8 104 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 CHST12Q9NRB3 414 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 GPRC5DQ9NZD1 345 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 NINJ2Q9NZG7 142 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 NPM3O75607 178 aaKnown RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms