RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 NDFIP2Q9NV92 336 aa12.06□□□□□ -0.48
HMGXB3-203ENST00000510472 TMEM248Q9NWD8 314 aa12.06□□□□□ -0.48
HMGXB3-203ENST00000510472 WSB2Q9NYS7 404 aaPredicted RBP12.06□□□□□ -0.48
HMGXB3-203ENST00000510472 NCDNQ9UBB6 729 aa12.06□□□□□ -0.48
HMGXB3-203ENST00000510472 GMEB2Q9UKD1 530 aa12.06□□□□□ -0.48
HMGXB3-203ENST00000510472 HS3ST2Q9Y278 367 aa12.06□□□□□ -0.48
HMGXB3-203ENST00000510472 PCDHGA5Q9Y5G8 931 aa12.06□□□□□ -0.48
HMGXB3-203ENST00000510472 SCINQ9Y6U3 715 aa12.06□□□□□ -0.48
HMGXB3-203ENST00000510472 CFAP54Q96N23 3096 aa12.05□□□□□ -0.48
HMGXB3-203ENST00000510472 CXorf51AA0A1B0GTR3 108 aa12.05□□□□□ -0.48
HMGXB3-203ENST00000510472 BCLAF3A2AJT9 711 aaKnown RBP12.05□□□□□ -0.48
HMGXB3-203ENST00000510472 WASH4PA8MWX3 477 aa12.05□□□□□ -0.48
HMGXB3-203ENST00000510472 C10orf142B7Z368 130 aa12.05□□□□□ -0.48
HMGXB3-203ENST00000510472 SNAP91O60641 907 aa12.05□□□□□ -0.48
HMGXB3-203ENST00000510472 SIN3BO75182 1162 aa12.05□□□□□ -0.48
HMGXB3-203ENST00000510472 LRCH4O75427 683 aa12.05□□□□□ -0.48
HMGXB3-203ENST00000510472 MT-CO1P00395 513 aa12.05□□□□□ -0.48
HMGXB3-203ENST00000510472 MIPP30301 263 aa12.05□□□□□ -0.48
HMGXB3-203ENST00000510472 OR1E1P30953 314 aa12.05□□□□□ -0.48
HMGXB3-203ENST00000510472 PCK1P35558 622 aa12.05□□□□□ -0.48
HMGXB3-203ENST00000510472 TPMTP51580 245 aa12.05□□□□□ -0.48
HMGXB3-203ENST00000510472 ST8SIA6P61647 398 aa12.05□□□□□ -0.48
HMGXB3-203ENST00000510472 RPS14P62263 151 aaKnown RBP12.05□□□□□ -0.48
HMGXB3-203ENST00000510472 GFPT1Q06210 699 aaPredicted RBP12.05□□□□□ -0.48
HMGXB3-203ENST00000510472 ACAP1Q15027 740 aa12.05□□□□□ -0.48
HMGXB3-203ENST00000510472 ELF2Q15723 593 aa12.05□□□□□ -0.48
HMGXB3-203ENST00000510472 SLC36A4Q6YBV0 504 aa12.05□□□□□ -0.48
HMGXB3-203ENST00000510472 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.05□□□□□ -0.48
HMGXB3-203ENST00000510472 PSTKQ8IV42 348 aaKnown RBP12.05□□□□□ -0.48
HMGXB3-203ENST00000510472 GPR161Q8N6U8 529 aaKnown RBP12.05□□□□□ -0.48
HMGXB3-203ENST00000510472 NIPA2Q8N8Q9 360 aa12.05□□□□□ -0.48
HMGXB3-203ENST00000510472 TC2NQ8N9U0 490 aa12.05□□□□□ -0.48
HMGXB3-203ENST00000510472 DCAF4L2Q8NA75 395 aa12.05□□□□□ -0.48
HMGXB3-203ENST00000510472 PRCCQ92733 491 aaPredicted RBP12.05□□□□□ -0.48
HMGXB3-203ENST00000510472 TBC1D31Q96DN5 1066 aa12.05□□□□□ -0.48
HMGXB3-203ENST00000510472 ZNF419Q96HQ0 510 aaPredicted RBP12.05□□□□□ -0.48
HMGXB3-203ENST00000510472 SPACA7Q96KW9 195 aa12.05□□□□□ -0.48
HMGXB3-203ENST00000510472 NOL6Q9H6R4 1146 aaKnown RBP12.05□□□□□ -0.48
HMGXB3-203ENST00000510472 MYO1AQ9UBC5 1043 aa12.05□□□□□ -0.48
HMGXB3-203ENST00000510472 VPS51Q9UID3 782 aa12.05□□□□□ -0.48
HMGXB3-203ENST00000510472 VPS28Q9UK41 221 aa12.05□□□□□ -0.48
HMGXB3-203ENST00000510472 WDR87Q6ZQQ6 2873 aa12.05□□□□□ -0.48
HMGXB3-203ENST00000510472 ABCA7Q8IZY2 2146 aa12.04□□□□□ -0.48
HMGXB3-203ENST00000510472 EDDM13A0A1B0GTR0 161 aa12.04□□□□□ -0.48
HMGXB3-203ENST00000510472 EIF3CLB5ME19 914 aaKnown RBP12.04□□□□□ -0.48
HMGXB3-203ENST00000510472 AKR1B15C9JRZ8 316 aaPredicted RBP12.04□□□□□ -0.48
HMGXB3-203ENST00000510472 ZNF821O75541 412 aaPredicted RBP12.04□□□□□ -0.48
HMGXB3-203ENST00000510472 CD160O95971 181 aa12.04□□□□□ -0.48
HMGXB3-203ENST00000510472 ZNF806P0C7X5 589 aa12.04□□□□□ -0.48
HMGXB3-203ENST00000510472 VAV1P15498 845 aa12.04□□□□□ -0.48
HMGXB3-203ENST00000510472 IL1R2P27930 398 aa12.04□□□□□ -0.48
HMGXB3-203ENST00000510472 CD6P30203 668 aa12.04□□□□□ -0.48
HMGXB3-203ENST00000510472 PTGER3P43115 390 aa12.04□□□□□ -0.48
HMGXB3-203ENST00000510472 MAPKAPK2P49137 400 aa12.04□□□□□ -0.48
HMGXB3-203ENST00000510472 NUMBP49757 651 aa12.04□□□□□ -0.48
HMGXB3-203ENST00000510472 ZNF75DP51815 510 aa12.04□□□□□ -0.48
HMGXB3-203ENST00000510472 GNA12Q03113 381 aa12.04□□□□□ -0.48
HMGXB3-203ENST00000510472 PIGHQ14442 188 aaPredicted RBP12.04□□□□□ -0.48
HMGXB3-203ENST00000510472 CSRP2Q16527 193 aa12.04□□□□□ -0.48
HMGXB3-203ENST00000510472 CA9Q16790 459 aa12.04□□□□□ -0.48
HMGXB3-203ENST00000510472 EFHC2Q5JST6 749 aa12.04□□□□□ -0.48
HMGXB3-203ENST00000510472 ERMARDQ5T6L9 678 aa12.04□□□□□ -0.48
HMGXB3-203ENST00000510472 KIAA1324Q6UXG2 1013 aaKnown RBP12.04□□□□□ -0.48
HMGXB3-203ENST00000510472 LPCAT2Q7L5N7 544 aa12.04□□□□□ -0.48
HMGXB3-203ENST00000510472 CNGA4Q8IV77 575 aa12.04□□□□□ -0.48
HMGXB3-203ENST00000510472 SH2D3CQ8N5H7 860 aa12.04□□□□□ -0.48
HMGXB3-203ENST00000510472 OR7D4Q8NG98 312 aa12.04□□□□□ -0.48
HMGXB3-203ENST00000510472 ARHGEF2Q92974 986 aaKnown RBP12.04□□□□□ -0.48
HMGXB3-203ENST00000510472 MRFAP1L1Q96HT8 127 aa12.04□□□□□ -0.48
HMGXB3-203ENST00000510472 EIF3CQ99613 913 aaKnown RBP12.04□□□□□ -0.48
HMGXB3-203ENST00000510472 NCAPGQ9BPX3 1015 aa12.04□□□□□ -0.48
HMGXB3-203ENST00000510472 C2orf49Q9BVC5 232 aaPredicted RBP12.04□□□□□ -0.48
HMGXB3-203ENST00000510472 PACSIN1Q9BY11 444 aa12.04□□□□□ -0.48
HMGXB3-203ENST00000510472 MUC3BQ9H195 1237 aa12.04□□□□□ -0.48
HMGXB3-203ENST00000510472 ARRDC1-AS1Q9H2J1 176 aa12.04□□□□□ -0.48
HMGXB3-203ENST00000510472 NHEJ1Q9H9Q4 299 aaPredicted RBP12.04□□□□□ -0.48
HMGXB3-203ENST00000510472 SEMA4GQ9NTN9 838 aa12.04□□□□□ -0.48
HMGXB3-203ENST00000510472 CYP8B1Q9UNU6 501 aa12.04□□□□□ -0.48
HMGXB3-203ENST00000510472 MUC22E2RYF6 1773 aaPredicted RBP12.04□□□□□ -0.48
HMGXB3-203ENST00000510472 ZNF292O60281 2723 aa12.04□□□□□ -0.48
HMGXB3-203ENST00000510472 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.03□□□□□ -0.48
HMGXB3-203ENST00000510472 K7ERQ8 282 aa12.03□□□□□ -0.48
HMGXB3-203ENST00000510472 MAP3K13O43283 966 aa12.03□□□□□ -0.48
HMGXB3-203ENST00000510472 SMAD6O43541 496 aaKnown RBP12.03□□□□□ -0.48
HMGXB3-203ENST00000510472 RNF8O76064 485 aa12.03□□□□□ -0.48
HMGXB3-203ENST00000510472 TPM1P09493 284 aa12.03□□□□□ -0.48
HMGXB3-203ENST00000510472 SRCP12931 536 aa12.03□□□□□ -0.48
HMGXB3-203ENST00000510472 TCF4P15884 667 aa12.03□□□□□ -0.48
HMGXB3-203ENST00000510472 GLDCP23378 1020 aa12.03□□□□□ -0.48
HMGXB3-203ENST00000510472 EPHB2P29323 1055 aa12.03□□□□□ -0.48
HMGXB3-203ENST00000510472 OXTRP30559 389 aa12.03□□□□□ -0.48
HMGXB3-203ENST00000510472 HTR7P34969 479 aa12.03□□□□□ -0.48
HMGXB3-203ENST00000510472 NNMTP40261 264 aa12.03□□□□□ -0.48
HMGXB3-203ENST00000510472 KRT83P78385 493 aa12.03□□□□□ -0.48
HMGXB3-203ENST00000510472 FOXK2Q01167 660 aa12.03□□□□□ -0.48
HMGXB3-203ENST00000510472 SLC20A2Q08357 652 aa12.03□□□□□ -0.48
HMGXB3-203ENST00000510472 SPEM2Q0P670 501 aa12.03□□□□□ -0.48
HMGXB3-203ENST00000510472 ELAVL3Q14576 367 aaKnown RBP12.03□□□□□ -0.48
HMGXB3-203ENST00000510472 DLG2Q15700 870 aa12.03□□□□□ -0.48
HMGXB3-203ENST00000510472 TSR1Q2NL82 804 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms