RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 WDCPQ9H6R7 721 aa9.01□□□□□ -0.97
PDLIM5-213ENST00000509357 GPATCH2LQ9NWQ4 482 aa9.01□□□□□ -0.97
PDLIM5-213ENST00000509357 RRN3Q9NYV6 651 aa9.01□□□□□ -0.97
PDLIM5-213ENST00000509357 KIAA1522Q9P206 1035 aaPredicted RBP9.01□□□□□ -0.97
PDLIM5-213ENST00000509357 IMPACTQ9P2X3 320 aa9.01□□□□□ -0.97
PDLIM5-213ENST00000509357 SUN2Q9UH99 717 aa9.01□□□□□ -0.97
PDLIM5-213ENST00000509357 STAP1Q9ULZ2 295 aa9.01□□□□□ -0.97
PDLIM5-213ENST00000509357 ATXN2Q99700 1313 aaKnown RBP9.01□□□□□ -0.97
PDLIM5-213ENST00000509357 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9□□□□□ -0.97
PDLIM5-213ENST00000509357 ANKRD62A6NC57 917 aa9□□□□□ -0.97
PDLIM5-213ENST00000509357 MEI4A8MW99 385 aa9□□□□□ -0.97
PDLIM5-213ENST00000509357 PATE3B3GLJ2 98 aa9□□□□□ -0.97
PDLIM5-213ENST00000509357 EIF3CLB5ME19 914 aaKnown RBP9□□□□□ -0.97
PDLIM5-213ENST00000509357 AKR1B10O60218 316 aa9□□□□□ -0.97
PDLIM5-213ENST00000509357 LRCH4O75427 683 aa9□□□□□ -0.97
PDLIM5-213ENST00000509357 PAGE1O75459 146 aa9□□□□□ -0.97
PDLIM5-213ENST00000509357 CNTN5O94779 1100 aa9□□□□□ -0.97
PDLIM5-213ENST00000509357 LUC7L3O95232 432 aaKnown RBP9□□□□□ -0.97
PDLIM5-213ENST00000509357 NDUFA10O95299 355 aa9□□□□□ -0.97
PDLIM5-213ENST00000509357 F9P00740 461 aa9□□□□□ -0.97
PDLIM5-213ENST00000509357 ASLP04424 464 aa9□□□□□ -0.97
PDLIM5-213ENST00000509357 TMEM253P0C7T8 217 aa9□□□□□ -0.97
PDLIM5-213ENST00000509357 ITPKAP23677 461 aa9□□□□□ -0.97
PDLIM5-213ENST00000509357 OXTRP30559 389 aa9□□□□□ -0.97
PDLIM5-213ENST00000509357 NNMTP40261 264 aa9□□□□□ -0.97
PDLIM5-213ENST00000509357 CSKP41240 450 aa9□□□□□ -0.97
PDLIM5-213ENST00000509357 TAS2R40P59535 323 aa9□□□□□ -0.97
PDLIM5-213ENST00000509357 SLC25A11Q02978 314 aaKnown RBP9□□□□□ -0.97
PDLIM5-213ENST00000509357 DEUP1Q05D60 604 aa9□□□□□ -0.97
PDLIM5-213ENST00000509357 ZNF33AQ06730 810 aa9□□□□□ -0.97
PDLIM5-213ENST00000509357 LMAN2Q12907 356 aa9□□□□□ -0.97
PDLIM5-213ENST00000509357 SEMA3BQ13214 749 aa9□□□□□ -0.97
PDLIM5-213ENST00000509357 MTA1Q13330 715 aa9□□□□□ -0.97
PDLIM5-213ENST00000509357 ZNF177Q13360 481 aaPredicted RBP9□□□□□ -0.97
PDLIM5-213ENST00000509357 UAP1L1Q3KQV9 507 aa9□□□□□ -0.97
PDLIM5-213ENST00000509357 ALFQ53S48 1182 aa9□□□□□ -0.97
PDLIM5-213ENST00000509357 FSCBQ5H9T9 825 aa9□□□□□ -0.97
PDLIM5-213ENST00000509357 PITRM1Q5JRX3 1037 aa9□□□□□ -0.97
PDLIM5-213ENST00000509357 WDR45BQ5MNZ6 344 aa9□□□□□ -0.97
PDLIM5-213ENST00000509357 TTC39BQ5VTQ0 682 aaPredicted RBP9□□□□□ -0.97
PDLIM5-213ENST00000509357 DDX51Q8N8A6 666 aaKnown RBP eCLIP9□□□□□ -0.97
PDLIM5-213ENST00000509357 OR2T3Q8NH03 318 aa9□□□□□ -0.97
PDLIM5-213ENST00000509357 CEP76Q8TAP6 659 aa9□□□□□ -0.97
PDLIM5-213ENST00000509357 FOXJ1Q92949 421 aa9□□□□□ -0.97
PDLIM5-213ENST00000509357 TOE1Q96GM8 510 aaKnown RBP9□□□□□ -0.97
PDLIM5-213ENST00000509357 HSPA12BQ96MM6 686 aa9□□□□□ -0.97
PDLIM5-213ENST00000509357 ZNF830Q96NB3 372 aaPredicted RBP9□□□□□ -0.97
PDLIM5-213ENST00000509357 PPP1R9BQ96SB3 815 aa9□□□□□ -0.97
PDLIM5-213ENST00000509357 EIF3CQ99613 913 aaKnown RBP9□□□□□ -0.97
PDLIM5-213ENST00000509357 BAG1Q99933 345 aaPredicted RBP9□□□□□ -0.97
PDLIM5-213ENST00000509357 MKRN2Q9H000 416 aaKnown RBP9□□□□□ -0.97
PDLIM5-213ENST00000509357 TKTL2Q9H0I9 626 aa9□□□□□ -0.97
PDLIM5-213ENST00000509357 SIK2Q9H0K1 926 aa9□□□□□ -0.97
PDLIM5-213ENST00000509357 RXFP3Q9NSD7 469 aa9□□□□□ -0.97
PDLIM5-213ENST00000509357 NDFIP2Q9NV92 336 aa9□□□□□ -0.97
PDLIM5-213ENST00000509357 VANGL2Q9ULK5 521 aa9□□□□□ -0.97
PDLIM5-213ENST00000509357 PAXBP1Q9Y5B6 917 aa9□□□□□ -0.97
PDLIM5-213ENST00000509357 CKAP5Q14008 2032 aa8.99□□□□□ -0.97
PDLIM5-213ENST00000509357 NUP205Q92621 2012 aa8.99□□□□□ -0.97
PDLIM5-213ENST00000509357 C4orf47A7E2U8 309 aa8.99□□□□□ -0.97
PDLIM5-213ENST00000509357 RNASEH1O60930 286 aaKnown RBP8.99□□□□□ -0.97
PDLIM5-213ENST00000509357 MTA2O94776 668 aa8.99□□□□□ -0.97
PDLIM5-213ENST00000509357 DNTTP04053 509 aa8.99□□□□□ -0.97
PDLIM5-213ENST00000509357 GNSP15586 552 aa8.99□□□□□ -0.97
PDLIM5-213ENST00000509357 MIPP30301 263 aa8.99□□□□□ -0.97
PDLIM5-213ENST00000509357 RDXP35241 583 aaKnown RBP8.99□□□□□ -0.97
PDLIM5-213ENST00000509357 MAPK8P45983 427 aa8.99□□□□□ -0.97
PDLIM5-213ENST00000509357 TPMTP51580 245 aa8.99□□□□□ -0.97
PDLIM5-213ENST00000509357 OXCT1P55809 520 aa8.99□□□□□ -0.97
PDLIM5-213ENST00000509357 IRX4P78413 519 aa8.99□□□□□ -0.97
PDLIM5-213ENST00000509357 ECT2LQ008S8 904 aa8.99□□□□□ -0.97
PDLIM5-213ENST00000509357 ENPP2Q13822 863 aa8.99□□□□□ -0.97
PDLIM5-213ENST00000509357 AUHQ13825 339 aaKnown RBP8.99□□□□□ -0.97
PDLIM5-213ENST00000509357 GSE1Q14687 1217 aa8.99□□□□□ -0.97
PDLIM5-213ENST00000509357 PTPRNQ16849 979 aa8.99□□□□□ -0.97
PDLIM5-213ENST00000509357 DUOXA1Q1HG43 343 aa8.99□□□□□ -0.97
PDLIM5-213ENST00000509357 TTC31Q49AM3 519 aaPredicted RBP8.99□□□□□ -0.97
PDLIM5-213ENST00000509357 C5orf22Q49AR2 442 aa8.99□□□□□ -0.97
PDLIM5-213ENST00000509357 ATP13A4Q4VNC1 1196 aa8.99□□□□□ -0.97
PDLIM5-213ENST00000509357 FBXL22Q6P050 247 aa8.99□□□□□ -0.97
PDLIM5-213ENST00000509357 LRRC31Q6UY01 552 aa8.99□□□□□ -0.97
PDLIM5-213ENST00000509357 STRADAQ7RTN6 431 aa8.99□□□□□ -0.97
PDLIM5-213ENST00000509357 RABEPKQ7Z6M1 372 aa8.99□□□□□ -0.97
PDLIM5-213ENST00000509357 METTL3Q86U44 580 aaKnown RBP8.99□□□□□ -0.97
PDLIM5-213ENST00000509357 LRRC8AQ8IWT6 810 aa8.99□□□□□ -0.97
PDLIM5-213ENST00000509357 CCAR2Q8N163 923 aaKnown RBP8.99□□□□□ -0.97
PDLIM5-213ENST00000509357 SLC35G2Q8TBE7 412 aa8.99□□□□□ -0.97
PDLIM5-213ENST00000509357 ZNF564Q8TBZ8 553 aaPredicted RBP8.99□□□□□ -0.97
PDLIM5-213ENST00000509357 FNIP1Q8TF40 1166 aa8.99□□□□□ -0.97
PDLIM5-213ENST00000509357 SNX19Q92543 992 aa8.99□□□□□ -0.97
PDLIM5-213ENST00000509357 TTC17Q96AE7 1141 aa8.99□□□□□ -0.97
PDLIM5-213ENST00000509357 CCDC42Q96M95 316 aa8.99□□□□□ -0.97
PDLIM5-213ENST00000509357 CNPY3Q9BT09 278 aa8.99□□□□□ -0.97
PDLIM5-213ENST00000509357 GTPBP2Q9BX10 602 aaKnown RBP8.99□□□□□ -0.97
PDLIM5-213ENST00000509357 GPR174Q9BXC1 333 aa8.99□□□□□ -0.97
PDLIM5-213ENST00000509357 MIR1-1HGQ9H1L0 117 aa8.99□□□□□ -0.97
PDLIM5-213ENST00000509357 TMEM245Q9H330 911 aa8.99□□□□□ -0.97
PDLIM5-213ENST00000509357 FBRSQ9HAH7 460 aa8.99□□□□□ -0.97
PDLIM5-213ENST00000509357 CD248Q9HCU0 757 aa8.99□□□□□ -0.97
PDLIM5-213ENST00000509357 CD93Q9NPY3 652 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms