RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 TUBB8Q3ZCM7 444 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 FASTKD1Q53R41 847 aaKnown RBP4.01□□□□□ -1.77
NEDD4-209ENST00000508871 TCP11X2Q5H9J9 407 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 FBXO47Q5MNV8 452 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 STYK1Q6J9G0 422 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 SCARA5Q6ZMJ2 495 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 TMEM110Q86TL2 294 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 TRIM74Q86UV6 250 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 TRIM73Q86UV7 250 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 HID1Q8IV36 788 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 SLC43A2Q8N370 569 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 HDDC3Q8N4P3 179 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 MSANTD3Q96H12 275 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 NAPGQ99747 312 aaPredicted RBP4.01□□□□□ -1.77
NEDD4-209ENST00000508871 CENPKQ9BS16 269 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 CCDC28BQ9BUN5 200 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 TRIM62Q9BVG3 475 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 FSD1LQ9BXM9 530 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 CLPBQ9H078 707 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 TMEM140Q9NV12 185 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 CCPG1Q9ULG6 757 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 EXOGQ9Y2C4 368 aaKnown RBP4.01□□□□□ -1.77
NEDD4-209ENST00000508871 BACE2Q9Y5Z0 518 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 GMEB1Q9Y692 573 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 H3BMM5 538 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 NRP2O60462 931 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 SMPD2O60906 423 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 BBOX1O75936 387 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 SCGB1D1O95968 90 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 TYRP1P17643 537 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 HOXC12P31275 282 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 SPAM1P38567 509 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 MAGEA4P43358 317 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 GRIA4P48058 902 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 ACTR1AP61163 376 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 LCP2Q13094 533 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 SNAPC1Q16533 368 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 GLE1Q53GS7 698 aaKnown RBP4.01□□□□□ -1.77
NEDD4-209ENST00000508871 FBXO48Q5FWF7 155 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 FAM69BQ5VUD6 431 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 MFSD7Q6UXD7 560 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 DET1Q7L5Y6 550 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 OTOP2Q7RTS6 562 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 SNX19Q92543 992 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 EIF2AQ9BY44 585 aaKnown RBP4.01□□□□□ -1.77
NEDD4-209ENST00000508871 SLC38A10Q9HBR0 1119 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 SEC14L3Q9UDX4 400 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 PALD1Q9ULE6 856 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 ABT1Q9ULW3 272 aaKnown RBP4.01□□□□□ -1.77
NEDD4-209ENST00000508871 FER1L6Q2WGJ9 1857 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 A0A1W2PNR3 127 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 PRR23AA6NEV1 266 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 C19orf67A6NJJ6 358 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 NPIPA7E9PJI5 369 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 F8W8V4 182 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 M0QYG6 137 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 PPIP5K2O43314 1243 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 ENSAO43768 121 aaKnown RBP4.01□□□□□ -1.77
NEDD4-209ENST00000508871 HS6ST1O60243 411 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 TADA2AO75478 443 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 BAG4O95429 457 aaKnown RBP4.01□□□□□ -1.77
NEDD4-209ENST00000508871 IL1AP01583 271 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 ANXA2P07355 339 aaKnown RBP4.01□□□□□ -1.77
NEDD4-209ENST00000508871 NPIPA8P0DM63 369 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 UBL4AP11441 157 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 VPREB1P12018 145 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 ZNF18P17022 549 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 CXCR5P32302 372 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 CAMLGP49069 296 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 RPS6KA3P51812 740 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 SOX8P57073 446 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 ZNF543Q08ER8 600 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 TBL3Q12788 808 aaKnown RBP4.01□□□□□ -1.77
NEDD4-209ENST00000508871 RPS26P11Q5JNZ5 115 aaPredicted RBP4.01□□□□□ -1.77
NEDD4-209ENST00000508871 GALNT18Q6P9A2 607 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 NYAP1Q6ZVC0 841 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 NUP54Q7Z3B4 507 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 GPR155Q7Z3F1 870 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 ZNF589Q86UQ0 364 aaPredicted RBP4.01□□□□□ -1.77
NEDD4-209ENST00000508871 NELFCDQ8IXH7 590 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 KRT78Q8N1N4 520 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 DTX3LQ8TDB6 740 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 ASZ1Q8WWH4 475 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 PRPF31Q8WWY3 499 aaKnown RBP4.01□□□□□ -1.77
NEDD4-209ENST00000508871 RPGRIP1Q96KN7 1286 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 TMEM117Q9H0C3 514 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 ZSCAN16Q9H4T2 348 aaPredicted RBP4.01□□□□□ -1.77
NEDD4-209ENST00000508871 WDR6Q9NNW5 1121 aaKnown RBP4.01□□□□□ -1.77
NEDD4-209ENST00000508871 FAM118AQ9NWS6 357 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 COPS7AQ9UBW8 275 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 CGGBP1Q9UFW8 167 aaPredicted RBP4.01□□□□□ -1.77
NEDD4-209ENST00000508871 PRG3Q9Y2Y8 225 aaPredicted RBP4.01□□□□□ -1.77
NEDD4-209ENST00000508871 ELP1O95163 1332 aa4.01□□□□□ -1.77
NEDD4-209ENST00000508871 DICER1Q9UPY3 1922 aaKnown RBP4□□□□□ -1.77
NEDD4-209ENST00000508871 LOC100506127A0A0U1RQW1 187 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 F8W810 466 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 GOLGA8TH3BQL2 631 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 DNPH1O43598 174 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 NPHS1O60500 1241 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 DNAJA2O60884 412 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms