RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 PES1O00541 588 aaKnown RBP16.69■□□□□ 0.26
LMNA-222ENST00000508500 KCNK3O14649 394 aa16.69■□□□□ 0.26
LMNA-222ENST00000508500 EPHB6O15197 1021 aa16.69■□□□□ 0.26
LMNA-222ENST00000508500 CD27P26842 260 aa16.69■□□□□ 0.26
LMNA-222ENST00000508500 DRD3P35462 400 aa16.69■□□□□ 0.26
LMNA-222ENST00000508500 FLT3P36888 993 aa16.69■□□□□ 0.26
LMNA-222ENST00000508500 SULT1E1P49888 294 aa16.69■□□□□ 0.26
LMNA-222ENST00000508500 TRIP6Q15654 476 aaKnown RBP16.69■□□□□ 0.26
LMNA-222ENST00000508500 ALFQ53S48 1182 aa16.69■□□□□ 0.26
LMNA-222ENST00000508500 TTC39BQ5VTQ0 682 aaPredicted RBP16.69■□□□□ 0.26
LMNA-222ENST00000508500 ZDHHC17Q8IUH5 632 aa16.69■□□□□ 0.26
LMNA-222ENST00000508500 EPS8L1Q8TE68 723 aa16.69■□□□□ 0.26
LMNA-222ENST00000508500 SLC20A1Q8WUM9 679 aa16.69■□□□□ 0.26
LMNA-222ENST00000508500 C18orf8Q96DM3 657 aa16.69■□□□□ 0.26
LMNA-222ENST00000508500 PGAP3Q96FM1 320 aaPredicted RBP16.69■□□□□ 0.26
LMNA-222ENST00000508500 TKTL2Q9H0I9 626 aa16.69■□□□□ 0.26
LMNA-222ENST00000508500 SIK2Q9H0K1 926 aa16.69■□□□□ 0.26
LMNA-222ENST00000508500 VPS16Q9H269 839 aa16.69■□□□□ 0.26
LMNA-222ENST00000508500 TM7SF3Q9NS93 570 aa16.69■□□□□ 0.26
LMNA-222ENST00000508500 TMEM59LQ9UK28 342 aa16.69■□□□□ 0.26
LMNA-222ENST00000508500 SARDHQ9UL12 918 aa16.69■□□□□ 0.26
LMNA-222ENST00000508500 NCKAP1Q9Y2A7 1128 aa16.69■□□□□ 0.26
LMNA-222ENST00000508500 TBC1D30Q9Y2I9 924 aa16.69■□□□□ 0.26
LMNA-222ENST00000508500 CEP83Q9Y592 693 aa16.69■□□□□ 0.26
LMNA-222ENST00000508500 FAM47DPA6NHR8 397 aa16.68■□□□□ 0.26
LMNA-222ENST00000508500 WNT9AO14904 365 aa16.68■□□□□ 0.26
LMNA-222ENST00000508500 RNASEH2AO75792 299 aaKnown RBP16.68■□□□□ 0.26
LMNA-222ENST00000508500 ZNF883P0CG24 379 aa16.68■□□□□ 0.26
LMNA-222ENST00000508500 CHRNB2P17787 502 aa16.68■□□□□ 0.26
LMNA-222ENST00000508500 SCNN1AP37088 669 aa16.68■□□□□ 0.26
LMNA-222ENST00000508500 PSMD8P48556 350 aa16.68■□□□□ 0.26
LMNA-222ENST00000508500 VASPP50552 380 aaPredicted RBP16.68■□□□□ 0.26
LMNA-222ENST00000508500 AFF3P51826 1226 aaKnown RBP16.68■□□□□ 0.26
LMNA-222ENST00000508500 NOMO3P69849 1222 aa16.68■□□□□ 0.26
LMNA-222ENST00000508500 KRT31Q15323 416 aa16.68■□□□□ 0.26
LMNA-222ENST00000508500 RAB6CQ53S08 254 aa16.68■□□□□ 0.26
LMNA-222ENST00000508500 NCEH1Q6PIU2 408 aa16.68■□□□□ 0.26
LMNA-222ENST00000508500 ERICH1Q86X53 443 aa16.68■□□□□ 0.26
LMNA-222ENST00000508500 CHCHD4Q8N4Q1 142 aa16.68■□□□□ 0.26
LMNA-222ENST00000508500 BAHD1Q8TBE0 780 aaPredicted RBP16.68■□□□□ 0.26
LMNA-222ENST00000508500 CPA5Q8WXQ8 436 aa16.68■□□□□ 0.26
LMNA-222ENST00000508500 FAM131CQ96AQ9 280 aa16.68■□□□□ 0.26
LMNA-222ENST00000508500 PSMB7Q99436 277 aa16.68■□□□□ 0.26
LMNA-222ENST00000508500 RAB6CQ9H0N0 254 aa16.68■□□□□ 0.26
LMNA-222ENST00000508500 WDCPQ9H6R7 721 aa16.68■□□□□ 0.26
LMNA-222ENST00000508500 NOCTQ9UK39 431 aaKnown RBP16.68■□□□□ 0.26
LMNA-222ENST00000508500 PCOLCE2Q9UKZ9 415 aa16.68■□□□□ 0.26
LMNA-222ENST00000508500 ANKRD6Q9Y2G4 727 aa16.68■□□□□ 0.26
LMNA-222ENST00000508500 MSRB2Q9Y3D2 182 aa16.68■□□□□ 0.26
LMNA-222ENST00000508500 TRPM6Q9BX84 2022 aa16.68■□□□□ 0.26
LMNA-222ENST00000508500 A0A1W2PPC4 97 aa16.67■□□□□ 0.26
LMNA-222ENST00000508500 DRGXA6NNA5 263 aa16.67■□□□□ 0.26
LMNA-222ENST00000508500 PLK4O00444 970 aa16.67■□□□□ 0.26
LMNA-222ENST00000508500 ATP9BO43861 1147 aa16.67■□□□□ 0.26
LMNA-222ENST00000508500 RNASEH1O60930 286 aaKnown RBP16.67■□□□□ 0.26
LMNA-222ENST00000508500 CER1O95813 267 aa16.67■□□□□ 0.26
LMNA-222ENST00000508500 WNT1P04628 370 aa16.67■□□□□ 0.26
LMNA-222ENST00000508500 GRIA4P48058 902 aa16.67■□□□□ 0.26
LMNA-222ENST00000508500 CDH4P55283 916 aa16.67■□□□□ 0.26
LMNA-222ENST00000508500 JAM2P57087 298 aa16.67■□□□□ 0.26
LMNA-222ENST00000508500 SNX16P57768 344 aa16.67■□□□□ 0.26
LMNA-222ENST00000508500 SULT2A1Q06520 285 aa16.67■□□□□ 0.26
LMNA-222ENST00000508500 SLC25A52Q3SY17 297 aa16.67■□□□□ 0.26
LMNA-222ENST00000508500 BRMS1LQ5PSV4 323 aa16.67■□□□□ 0.26
LMNA-222ENST00000508500 FAM102AQ5T9C2 384 aaPredicted RBP16.67■□□□□ 0.26
LMNA-222ENST00000508500 RNF219Q5W0B1 726 aaPredicted RBP16.67■□□□□ 0.26
LMNA-222ENST00000508500 RAB44Q7Z6P3 723 aaPredicted RBP16.67■□□□□ 0.26
LMNA-222ENST00000508500 SLCO6A1Q86UG4 719 aa16.67■□□□□ 0.26
LMNA-222ENST00000508500 PNPLA1Q8N8W4 532 aa16.67■□□□□ 0.26
LMNA-222ENST00000508500 GANCQ8TET4 914 aa16.67■□□□□ 0.26
LMNA-222ENST00000508500 SLC6A18Q96N87 628 aa16.67■□□□□ 0.26
LMNA-222ENST00000508500 OMDQ99983 421 aa16.67■□□□□ 0.26
LMNA-222ENST00000508500 PDCL3Q9H2J4 239 aa16.67■□□□□ 0.26
LMNA-222ENST00000508500 FANCLQ9NW38 375 aa16.67■□□□□ 0.26
LMNA-222ENST00000508500 RRN3Q9NYV6 651 aa16.67■□□□□ 0.26
LMNA-222ENST00000508500 FZD4Q9ULV1 537 aa16.67■□□□□ 0.26
LMNA-222ENST00000508500 BTBD3Q9Y2F9 522 aa16.67■□□□□ 0.26
LMNA-222ENST00000508500 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.66■□□□□ 0.26
LMNA-222ENST00000508500 GOLGA8SH3BPF8 625 aa16.66■□□□□ 0.26
LMNA-222ENST00000508500 RNF103O00237 685 aa16.66■□□□□ 0.26
LMNA-222ENST00000508500 CLDN11O75508 207 aa16.66■□□□□ 0.26
LMNA-222ENST00000508500 GFPT2O94808 682 aa16.66■□□□□ 0.26
LMNA-222ENST00000508500 MT-CO1P00395 513 aa16.66■□□□□ 0.26
LMNA-222ENST00000508500 IL1BP01584 269 aa16.66■□□□□ 0.26
LMNA-222ENST00000508500 CYP1A1P04798 512 aaPredicted RBP16.66■□□□□ 0.26
LMNA-222ENST00000508500 HOXB3P14651 431 aaPredicted RBP16.66■□□□□ 0.26
LMNA-222ENST00000508500 GOT1P17174 413 aa16.66■□□□□ 0.26
LMNA-222ENST00000508500 C5AR1P21730 350 aa16.66■□□□□ 0.26
LMNA-222ENST00000508500 CTSKP43235 329 aa16.66■□□□□ 0.26
LMNA-222ENST00000508500 ATRXP46100 2492 aa16.66■□□□□ 0.26
LMNA-222ENST00000508500 ADPRHP54922 357 aa16.66■□□□□ 0.26
LMNA-222ENST00000508500 FMO1Q01740 532 aa16.66■□□□□ 0.26
LMNA-222ENST00000508500 DEUP1Q05D60 604 aa16.66■□□□□ 0.26
LMNA-222ENST00000508500 ZNF177Q13360 481 aaPredicted RBP16.66■□□□□ 0.26
LMNA-222ENST00000508500 HNRNPDQ14103 355 aaKnown RBP16.66■□□□□ 0.26
LMNA-222ENST00000508500 ELAVL3Q14576 367 aaKnown RBP16.66■□□□□ 0.26
LMNA-222ENST00000508500 NAA35Q5VZE5 725 aa16.66■□□□□ 0.26
LMNA-222ENST00000508500 IL27RAQ6UWB1 636 aa16.66■□□□□ 0.26
LMNA-222ENST00000508500 OR2T34Q8NGX1 318 aa16.66■□□□□ 0.26
LMNA-222ENST00000508500 CFAP57Q96MR6 1250 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 160.8 ms