RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 GNSP15586 552 aa20.41■□□□□ 0.86
SFXN1-209ENST00000508290 HTR7P34969 479 aa20.41■□□□□ 0.86
SFXN1-209ENST00000508290 MAPKAPK2P49137 400 aa20.41■□□□□ 0.86
SFXN1-209ENST00000508290 TRIM14Q14142 442 aa20.41■□□□□ 0.86
SFXN1-209ENST00000508290 SF3A2Q15428 464 aaKnown RBP20.41■□□□□ 0.86
SFXN1-209ENST00000508290 DUOXA1Q1HG43 343 aa20.41■□□□□ 0.86
SFXN1-209ENST00000508290 ALFQ53S48 1182 aa20.41■□□□□ 0.86
SFXN1-209ENST00000508290 TDRD12Q587J7 1177 aaKnown RBP20.41■□□□□ 0.86
SFXN1-209ENST00000508290 EFHC2Q5JST6 749 aa20.41■□□□□ 0.86
SFXN1-209ENST00000508290 C9orf64Q5T6V5 341 aa20.41■□□□□ 0.86
SFXN1-209ENST00000508290 SLFN11Q7Z7L1 901 aa20.41■□□□□ 0.86
SFXN1-209ENST00000508290 PHLDB2Q86SQ0 1253 aa20.41■□□□□ 0.86
SFXN1-209ENST00000508290 ZNF366Q8N895 744 aa20.41■□□□□ 0.86
SFXN1-209ENST00000508290 FNIP1Q8TF40 1166 aa20.41■□□□□ 0.86
SFXN1-209ENST00000508290 CCDC114Q96M63 670 aa20.41■□□□□ 0.86
SFXN1-209ENST00000508290 HSPA12BQ96MM6 686 aa20.41■□□□□ 0.86
SFXN1-209ENST00000508290 EIF3CQ99613 913 aaKnown RBP20.41■□□□□ 0.86
SFXN1-209ENST00000508290 NUSAP1Q9BXS6 441 aaKnown RBP20.41■□□□□ 0.86
SFXN1-209ENST00000508290 SGK2Q9HBY8 427 aa20.41■□□□□ 0.86
SFXN1-209ENST00000508290 MRPL47Q9HD33 250 aaKnown RBP20.41■□□□□ 0.86
SFXN1-209ENST00000508290 DONSONQ9NYP3 566 aa20.41■□□□□ 0.86
SFXN1-209ENST00000508290 TPX2Q9ULW0 747 aaKnown RBP20.41■□□□□ 0.86
SFXN1-209ENST00000508290 ALOX15BO15296 676 aa20.4■□□□□ 0.86
SFXN1-209ENST00000508290 ADH1BP00325 375 aa20.4■□□□□ 0.86
SFXN1-209ENST00000508290 SERPING1P05155 500 aa20.4■□□□□ 0.86
SFXN1-209ENST00000508290 RHOQP17081 205 aa20.4■□□□□ 0.86
SFXN1-209ENST00000508290 CTSOP43234 321 aaPredicted RBP20.4■□□□□ 0.86
SFXN1-209ENST00000508290 IRAK1P51617 712 aa20.4■□□□□ 0.86
SFXN1-209ENST00000508290 SLC20A2Q08357 652 aa20.4■□□□□ 0.86
SFXN1-209ENST00000508290 MAMLD1Q13495 774 aa20.4■□□□□ 0.86
SFXN1-209ENST00000508290 MANEALQ5VSG8 457 aa20.4■□□□□ 0.86
SFXN1-209ENST00000508290 RETSATQ6NUM9 610 aa20.4■□□□□ 0.86
SFXN1-209ENST00000508290 SLC23A3Q6PIS1 610 aa20.4■□□□□ 0.86
SFXN1-209ENST00000508290 ARMCX6Q7L4S7 300 aa20.4■□□□□ 0.86
SFXN1-209ENST00000508290 ERLEC1Q96DZ1 483 aa20.4■□□□□ 0.86
SFXN1-209ENST00000508290 BTBD1Q9H0C5 482 aa20.4■□□□□ 0.86
SFXN1-209ENST00000508290 PABPC3Q9H361 631 aaKnown RBP20.4■□□□□ 0.86
SFXN1-209ENST00000508290 SLCO3A1Q9UIG8 710 aa20.4■□□□□ 0.86
SFXN1-209ENST00000508290 FZD4Q9ULV1 537 aa20.4■□□□□ 0.86
SFXN1-209ENST00000508290 TTC34A8MYJ7 566 aa20.39■□□□□ 0.85
SFXN1-209ENST00000508290 DDX3XO00571 662 aaKnown RBP eCLIP20.39■□□□□ 0.851e-17■■■□□ 15.1
SFXN1-209ENST00000508290 CCP110O43303 1012 aa20.39■□□□□ 0.85
SFXN1-209ENST00000508290 FTLP02792 175 aaPredicted RBP20.39■□□□□ 0.85
SFXN1-209ENST00000508290 ITPKAP23677 461 aa20.39■□□□□ 0.85
SFXN1-209ENST00000508290 L1CAMP32004 1257 aa20.39■□□□□ 0.85
SFXN1-209ENST00000508290 RPL7AP62424 266 aaKnown RBP20.39■□□□□ 0.85
SFXN1-209ENST00000508290 CST6Q15828 149 aa20.39■□□□□ 0.85
SFXN1-209ENST00000508290 CCDC6Q16204 474 aa20.39■□□□□ 0.85
SFXN1-209ENST00000508290 TRIM61Q5EBN2 209 aa20.39■□□□□ 0.85
SFXN1-209ENST00000508290 FAM46CQ5VWP2 391 aa20.39■□□□□ 0.85
SFXN1-209ENST00000508290 E4F1Q66K89 784 aaPredicted RBP20.39■□□□□ 0.85
SFXN1-209ENST00000508290 TFAP2DQ7Z6R9 452 aa20.39■□□□□ 0.85
SFXN1-209ENST00000508290 DRC7Q8IY82 874 aa20.39■□□□□ 0.85
SFXN1-209ENST00000508290 DNASE2BQ8WZ79 361 aa20.39■□□□□ 0.85
SFXN1-209ENST00000508290 PTPRN2Q92932 1015 aa20.39■□□□□ 0.85
SFXN1-209ENST00000508290 TBC1D31Q96DN5 1066 aa20.39■□□□□ 0.85
SFXN1-209ENST00000508290 RPL10LQ96L21 214 aaKnown RBP20.39■□□□□ 0.85
SFXN1-209ENST00000508290 EDEM2Q9BV94 578 aa20.39■□□□□ 0.85
SFXN1-209ENST00000508290 GPR174Q9BXC1 333 aa20.39■□□□□ 0.85
SFXN1-209ENST00000508290 ISCUQ9H1K1 167 aa20.39■□□□□ 0.85
SFXN1-209ENST00000508290 TAS2R14Q9NYV8 317 aa20.39■□□□□ 0.85
SFXN1-209ENST00000508290 MPP6Q9NZW5 540 aa20.39■□□□□ 0.85
SFXN1-209ENST00000508290 SLC6A14Q9UN76 642 aa20.39■□□□□ 0.85
SFXN1-209ENST00000508290 FARP1Q9Y4F1 1045 aaPredicted RBP20.39■□□□□ 0.85
SFXN1-209ENST00000508290 SPTBN4Q9H254 2564 aa20.38■□□□□ 0.85
SFXN1-209ENST00000508290 LNP1A1A4G5 178 aa20.38■□□□□ 0.85
SFXN1-209ENST00000508290 MEI4A8MW99 385 aa20.38■□□□□ 0.85
SFXN1-209ENST00000508290 TMCO5BA8MYB1 307 aa20.38■□□□□ 0.85
SFXN1-209ENST00000508290 GJB6O95452 261 aa20.38■□□□□ 0.85
SFXN1-209ENST00000508290 PLEKP08567 350 aaPredicted RBP20.38■□□□□ 0.85
SFXN1-209ENST00000508290 SERPINF2P08697 491 aa20.38■□□□□ 0.85
SFXN1-209ENST00000508290 C5AR1P21730 350 aa20.38■□□□□ 0.85
SFXN1-209ENST00000508290 STK19P49842 368 aaPredicted RBP20.38■□□□□ 0.85
SFXN1-209ENST00000508290 GEMIN4P57678 1058 aaKnown RBP20.38■□□□□ 0.85
SFXN1-209ENST00000508290 SH3PXD2AQ5TCZ1 1133 aa20.38■□□□□ 0.85
SFXN1-209ENST00000508290 HGSNATQ68CP4 663 aa20.38■□□□□ 0.85
SFXN1-209ENST00000508290 SPECC1LQ69YQ0 1117 aa20.38■□□□□ 0.85
SFXN1-209ENST00000508290 IL31Q6EBC2 164 aa20.38■□□□□ 0.85
SFXN1-209ENST00000508290 DGLUCYQ7Z3D6 616 aa20.38■□□□□ 0.85
SFXN1-209ENST00000508290 TMC6Q7Z403 805 aa20.38■□□□□ 0.85
SFXN1-209ENST00000508290 SLC41A1Q8IVJ1 513 aa20.38■□□□□ 0.85
SFXN1-209ENST00000508290 RGL4Q8IZJ4 473 aa20.38■□□□□ 0.85
SFXN1-209ENST00000508290 SH2D3CQ8N5H7 860 aa20.38■□□□□ 0.85
SFXN1-209ENST00000508290 OR52K2Q8NGK3 314 aa20.38■□□□□ 0.85
SFXN1-209ENST00000508290 FRS2Q8WU20 508 aa20.38■□□□□ 0.85
SFXN1-209ENST00000508290 OR8D1Q8WZ84 308 aa20.38■□□□□ 0.85
SFXN1-209ENST00000508290 EPAS1Q99814 870 aa20.38■□□□□ 0.85
SFXN1-209ENST00000508290 XPO4Q9C0E2 1151 aaKnown RBP20.38■□□□□ 0.85
SFXN1-209ENST00000508290 TMPRSS4Q9NRS4 437 aa20.38■□□□□ 0.85
SFXN1-209ENST00000508290 TMEM248Q9NWD8 314 aa20.38■□□□□ 0.85
SFXN1-209ENST00000508290 ZNF212Q9UDV6 495 aa20.38■□□□□ 0.85
SFXN1-209ENST00000508290 CEP250Q9BV73 2442 aa20.38■□□□□ 0.85
SFXN1-209ENST00000508290 METTL12A8MUP2 240 aa20.37■□□□□ 0.85
SFXN1-209ENST00000508290 RNF8O76064 485 aa20.37■□□□□ 0.85
SFXN1-209ENST00000508290 LRIG2O94898 1065 aa20.37■□□□□ 0.85
SFXN1-209ENST00000508290 GYPCP04921 128 aa20.37■□□□□ 0.85
SFXN1-209ENST00000508290 TPM1P09493 284 aa20.37■□□□□ 0.85
SFXN1-209ENST00000508290 ZNF135P52742 658 aaPredicted RBP20.37■□□□□ 0.85
SFXN1-209ENST00000508290 GNA12Q03113 381 aa20.37■□□□□ 0.85
SFXN1-209ENST00000508290 ACAP1Q15027 740 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms