RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-223ENST00000508249 SFMBT2Q5VUG0 894 aa9.54□□□□□ -0.88
UBE2D3-223ENST00000508249 NUGGCQ68CJ6 796 aa9.54□□□□□ -0.88
UBE2D3-223ENST00000508249 DENND1BQ6P3S1 775 aa9.54□□□□□ -0.88
UBE2D3-223ENST00000508249 BHLHA9Q7RTU4 235 aa9.54□□□□□ -0.88
UBE2D3-223ENST00000508249 UNC45BQ8IWX7 931 aa9.54□□□□□ -0.88
UBE2D3-223ENST00000508249 ZNF557Q8N988 423 aaPredicted RBP9.54□□□□□ -0.88
UBE2D3-223ENST00000508249 C1orf131Q8NDD1 294 aaKnown RBP9.54□□□□□ -0.88
UBE2D3-223ENST00000508249 SORCS1Q8WY21 1168 aa9.54□□□□□ -0.88
UBE2D3-223ENST00000508249 SNX19Q92543 992 aa9.54□□□□□ -0.88
UBE2D3-223ENST00000508249 PRCCQ92733 491 aaPredicted RBP9.54□□□□□ -0.88
UBE2D3-223ENST00000508249 AZIN2Q96A70 460 aa9.54□□□□□ -0.88
UBE2D3-223ENST00000508249 CNDP2Q96KP4 475 aaKnown RBP9.54□□□□□ -0.88
UBE2D3-223ENST00000508249 XPO6Q96QU8 1125 aaKnown RBP9.54□□□□□ -0.88
UBE2D3-223ENST00000508249 DDX50Q9BQ39 737 aaKnown RBP9.54□□□□□ -0.88
UBE2D3-223ENST00000508249 RTN4Q9NQC3 1192 aaKnown RBP9.54□□□□□ -0.88
UBE2D3-223ENST00000508249 FAM207AQ9NSI2 230 aaPredicted RBP9.54□□□□□ -0.88
UBE2D3-223ENST00000508249 RRN3Q9NYV6 651 aa9.54□□□□□ -0.88
UBE2D3-223ENST00000508249 WDR35Q9P2L0 1181 aa9.54□□□□□ -0.88
UBE2D3-223ENST00000508249 PCDHB1Q9Y5F3 818 aa9.54□□□□□ -0.88
UBE2D3-223ENST00000508249 YJEFN3A6XGL0 299 aa9.53□□□□□ -0.88
UBE2D3-223ENST00000508249 E7ENQ6 273 aa9.53□□□□□ -0.88
UBE2D3-223ENST00000508249 TERTO14746 1132 aaKnown RBP9.53□□□□□ -0.88
UBE2D3-223ENST00000508249 WNT9AO14904 365 aa9.53□□□□□ -0.88
UBE2D3-223ENST00000508249 MDM4O15151 490 aa9.53□□□□□ -0.88
UBE2D3-223ENST00000508249 ZBTB24O43167 697 aaPredicted RBP9.53□□□□□ -0.88
UBE2D3-223ENST00000508249 SLC28A2O43868 658 aa9.53□□□□□ -0.88
UBE2D3-223ENST00000508249 HSF2BPO75031 334 aa9.53□□□□□ -0.88
UBE2D3-223ENST00000508249 SERPINC1P01008 464 aa9.53□□□□□ -0.88
UBE2D3-223ENST00000508249 KLKB1P03952 638 aa9.53□□□□□ -0.88
UBE2D3-223ENST00000508249 CYBBP04839 570 aa9.53□□□□□ -0.88
UBE2D3-223ENST00000508249 C1SP09871 688 aa9.53□□□□□ -0.88
UBE2D3-223ENST00000508249 JAM2P57087 298 aa9.53□□□□□ -0.88
UBE2D3-223ENST00000508249 CAMK2GQ13555 558 aaPredicted RBP9.53□□□□□ -0.88
UBE2D3-223ENST00000508249 TRIP4Q15650 581 aaPredicted RBP9.53□□□□□ -0.88
UBE2D3-223ENST00000508249 FIGNQ5HY92 759 aa9.53□□□□□ -0.88
UBE2D3-223ENST00000508249 ARHGAP40Q5TG30 622 aa9.53□□□□□ -0.88
UBE2D3-223ENST00000508249 SLC47A2Q86VL8 602 aa9.53□□□□□ -0.88
UBE2D3-223ENST00000508249 CACTIN-AS1Q8N1I8 211 aa9.53□□□□□ -0.88
UBE2D3-223ENST00000508249 CPXM2Q8N436 756 aa9.53□□□□□ -0.88
UBE2D3-223ENST00000508249 ZNF397Q8NF99 534 aaPredicted RBP9.53□□□□□ -0.88
UBE2D3-223ENST00000508249 EPS8L1Q8TE68 723 aa9.53□□□□□ -0.88
UBE2D3-223ENST00000508249 FAM149B1Q96BN6 582 aa9.53□□□□□ -0.88
UBE2D3-223ENST00000508249 PPP1R13BQ96KQ4 1090 aa9.53□□□□□ -0.88
UBE2D3-223ENST00000508249 SLC6A18Q96N87 628 aa9.53□□□□□ -0.88
UBE2D3-223ENST00000508249 ELF4Q99607 663 aaPredicted RBP9.53□□□□□ -0.88
UBE2D3-223ENST00000508249 TRIM4Q9C037 500 aa9.53□□□□□ -0.88
UBE2D3-223ENST00000508249 NUCKS1Q9H1E3 243 aaKnown RBP9.53□□□□□ -0.88
UBE2D3-223ENST00000508249 SYNCQ9H7C4 482 aa9.53□□□□□ -0.88
UBE2D3-223ENST00000508249 POPDC2Q9HBU9 364 aa9.53□□□□□ -0.88
UBE2D3-223ENST00000508249 CBX8Q9HC52 389 aa9.53□□□□□ -0.88
UBE2D3-223ENST00000508249 KIF26BQ2KJY2 2108 aa9.53□□□□□ -0.88
UBE2D3-223ENST00000508249 USP9YO00507 2555 aaPredicted RBP9.53□□□□□ -0.88
UBE2D3-223ENST00000508249 A0A1W2PNU3 283 aaPredicted RBP9.52□□□□□ -0.89
UBE2D3-223ENST00000508249 SLC12A8A0AV02 714 aa9.52□□□□□ -0.89
UBE2D3-223ENST00000508249 E5RJQ4 531 aa9.52□□□□□ -0.89
UBE2D3-223ENST00000508249 VILLO15195 856 aa9.52□□□□□ -0.89
UBE2D3-223ENST00000508249 IRAK2O43187 625 aa9.52□□□□□ -0.89
UBE2D3-223ENST00000508249 STC2O76061 302 aa9.52□□□□□ -0.89
UBE2D3-223ENST00000508249 LDOC1O95751 146 aaPredicted RBP9.52□□□□□ -0.89
UBE2D3-223ENST00000508249 SLC2A3P11169 496 aa9.52□□□□□ -0.89
UBE2D3-223ENST00000508249 ATP1A3P13637 1013 aa9.52□□□□□ -0.89
UBE2D3-223ENST00000508249 FERP16591 822 aa9.52□□□□□ -0.89
UBE2D3-223ENST00000508249 CD27P26842 260 aa9.52□□□□□ -0.89
UBE2D3-223ENST00000508249 EPHA8P29322 1005 aaPredicted RBP9.52□□□□□ -0.89
UBE2D3-223ENST00000508249 GABRB2P47870 512 aa9.52□□□□□ -0.89
UBE2D3-223ENST00000508249 CSRP3P50461 194 aa9.52□□□□□ -0.89
UBE2D3-223ENST00000508249 TMPRSS3P57727 454 aa9.52□□□□□ -0.89
UBE2D3-223ENST00000508249 YWHAZP63104 245 aaKnown RBP9.52□□□□□ -0.89
UBE2D3-223ENST00000508249 CDR2Q01850 454 aa9.52□□□□□ -0.89
UBE2D3-223ENST00000508249 APBA1Q02410 837 aa9.52□□□□□ -0.89
UBE2D3-223ENST00000508249 TEAD4Q15561 434 aa9.52□□□□□ -0.89
UBE2D3-223ENST00000508249 COLEC12Q5KU26 742 aa9.52□□□□□ -0.89
UBE2D3-223ENST00000508249 ACBD5Q5T8D3 534 aaPredicted RBP9.52□□□□□ -0.89
UBE2D3-223ENST00000508249 SLC26A9Q7LBE3 791 aa9.52□□□□□ -0.89
UBE2D3-223ENST00000508249 FAM217AQ8IXS0 508 aa9.52□□□□□ -0.89
UBE2D3-223ENST00000508249 MED8Q96G25 268 aa9.52□□□□□ -0.89
UBE2D3-223ENST00000508249 NAF1Q96HR8 494 aaKnown RBP9.52□□□□□ -0.89
UBE2D3-223ENST00000508249 LGMNQ99538 433 aa9.52□□□□□ -0.89
UBE2D3-223ENST00000508249 TMEM245Q9H330 911 aa9.52□□□□□ -0.89
UBE2D3-223ENST00000508249 ASCL3Q9NQ33 180 aa9.52□□□□□ -0.89
UBE2D3-223ENST00000508249 STOML2Q9UJZ1 356 aa9.52□□□□□ -0.89
UBE2D3-223ENST00000508249 AJAP1Q9UKB5 411 aaPredicted RBP9.52□□□□□ -0.89
UBE2D3-223ENST00000508249 PAXBP1Q9Y5B6 917 aa9.52□□□□□ -0.89
UBE2D3-223ENST00000508249 AHCTF1Q8WYP5 2266 aa9.51□□□□□ -0.89
UBE2D3-223ENST00000508249 A0A1W2PR77 199 aa9.51□□□□□ -0.89
UBE2D3-223ENST00000508249 TYW5A2RUC4 315 aaKnown RBP9.51□□□□□ -0.89
UBE2D3-223ENST00000508249 NPC1O15118 1278 aa9.51□□□□□ -0.89
UBE2D3-223ENST00000508249 CBFA2T2O43439 604 aa9.51□□□□□ -0.89
UBE2D3-223ENST00000508249 DAB1O75553 588 aa9.51□□□□□ -0.89
UBE2D3-223ENST00000508249 DXOO77932 396 aaKnown RBP9.51□□□□□ -0.89
UBE2D3-223ENST00000508249 SEMA4FO95754 770 aa9.51□□□□□ -0.89
UBE2D3-223ENST00000508249 CORO1AP31146 461 aaKnown RBP9.51□□□□□ -0.89
UBE2D3-223ENST00000508249 ACTN2P35609 894 aa9.51□□□□□ -0.89
UBE2D3-223ENST00000508249 SLC11A2P49281 568 aa9.51□□□□□ -0.89
UBE2D3-223ENST00000508249 GSCP56915 257 aaPredicted RBP9.51□□□□□ -0.89
UBE2D3-223ENST00000508249 TBX4P57082 545 aa9.51□□□□□ -0.89
UBE2D3-223ENST00000508249 SKOR1P84550 965 aa9.51□□□□□ -0.89
UBE2D3-223ENST00000508249 CDK17Q00537 523 aa9.51□□□□□ -0.89
UBE2D3-223ENST00000508249 NFKBIBQ15653 356 aa9.51□□□□□ -0.89
UBE2D3-223ENST00000508249 INAVAQ3KP66 663 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms