RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 ARFGAP2Q8N6H7 521 aa7.71□□□□□ -1.18
PDGFRA-206ENST00000508170 GPBAR1Q8TDU6 330 aa7.71□□□□□ -1.18
PDGFRA-206ENST00000508170 KIFAP3Q92845 792 aa7.71□□□□□ -1.18
PDGFRA-206ENST00000508170 NMD3Q96D46 503 aaKnown RBP7.71□□□□□ -1.18
PDGFRA-206ENST00000508170 FCRL4Q96PJ5 515 aa7.71□□□□□ -1.18
PDGFRA-206ENST00000508170 MNTQ99583 582 aa7.71□□□□□ -1.18
PDGFRA-206ENST00000508170 TSG101Q99816 390 aa7.71□□□□□ -1.18
PDGFRA-206ENST00000508170 DBNDD2Q9BQY9 259 aa7.71□□□□□ -1.18
PDGFRA-206ENST00000508170 C1orf43Q9BWL3 253 aa7.71□□□□□ -1.18
PDGFRA-206ENST00000508170 FRMD8P1Q9BZ68 369 aaPredicted RBP7.71□□□□□ -1.18
PDGFRA-206ENST00000508170 TTYH1Q9H313 450 aaPredicted RBP7.71□□□□□ -1.18
PDGFRA-206ENST00000508170 GP6Q9HCN6 339 aa7.71□□□□□ -1.18
PDGFRA-206ENST00000508170 NUDT15Q9NV35 164 aa7.71□□□□□ -1.18
PDGFRA-206ENST00000508170 ARHGAP20Q9P2F6 1191 aa7.71□□□□□ -1.18
PDGFRA-206ENST00000508170 DDX19BQ9UMR2 479 aa7.71□□□□□ -1.18
PDGFRA-206ENST00000508170 PLAGL2Q9UPG8 496 aa7.71□□□□□ -1.18
PDGFRA-206ENST00000508170 ERVK-19Q9WJR5 959 aa7.71□□□□□ -1.18
PDGFRA-206ENST00000508170 CARMIL2Q6F5E8 1435 aa7.71□□□□□ -1.18
PDGFRA-206ENST00000508170 PLB1Q6P1J6 1458 aa7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 KIF14Q15058 1648 aa7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 TNFSF14O43557 240 aa7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 MAGEA10P43363 369 aaPredicted RBP7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 SLC9B1Q4ZJI4 515 aa7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 CACHD1Q5VU97 1274 aa7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 SASS6Q6UVJ0 657 aa7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 RSPO2Q6UXX9 243 aaPredicted RBP7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 UNC13DQ70J99 1090 aa7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 RHOT2Q8IXI1 618 aa7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 SRRM1Q8IYB3 904 aaKnown RBP7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 MB21D1Q8N884 522 aa7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 SYT2Q8N9I0 419 aaPredicted RBP7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 OR52E1Q8NGJ3 308 aa7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 CORO1BQ9BR76 489 aa7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 MAGEB5Q9BZ81 275 aa7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 GPR62Q9BZJ7 368 aa7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 MKRN2Q9H000 416 aaKnown RBP7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 EVA1AQ9H8M9 152 aa7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 LRRC40Q9H9A6 602 aa7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 NRBP2Q9NSY0 501 aa7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 AJAP1Q9UKB5 411 aaPredicted RBP7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 ERCC6L2Q5T890 1561 aa7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 A0A1B0GWJ7 208 aa7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 MYO1GB0I1T2 1018 aa7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 DNPH1O43598 174 aa7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 STRNO43815 780 aa7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 CLN5O75503 358 aa7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 CRTAPO75718 401 aaPredicted RBP7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 CIB2O75838 187 aa7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 ASNSP08243 561 aa7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 CD40P25942 277 aa7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 BSGP35613 385 aa7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 SREBF1P36956 1147 aa7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 LIG4P49917 911 aa7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 PDE1AP54750 535 aa7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 KIAA1024LP59773 190 aa7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 GAD2Q05329 585 aa7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 CEBPEQ15744 281 aa7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 NFIL3Q16649 462 aa7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 SGO1Q5FBB7 561 aa7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 TEX35Q5T0J7 233 aa7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 BICDL1Q6ZP65 573 aa7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 MSANTD1Q6ZTZ1 278 aa7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 KCTD9Q7L273 389 aa7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 MIGA2Q7L4E1 593 aa7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 TPRA1Q86W33 373 aa7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 SYCE1Q8N0S2 351 aa7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 SLC35B4Q969S0 331 aa7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 NT5C3BQ969T7 300 aa7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 FBXW5Q969U6 566 aa7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 ACSBG1Q96GR2 724 aa7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 PPP1R10Q96QC0 940 aaKnown RBP7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 NR1H4Q96RI1 486 aaPredicted RBP7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 SECISBP2Q96T21 854 aaKnown RBP7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 RBM15Q96T37 977 aaKnown RBP eCLIP7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 PIP5K1AQ99755 562 aa7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 PHF7Q9BWX1 381 aaPredicted RBP7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 TRIM31Q9BZY9 425 aa7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 SMG9Q9H0W8 520 aaKnown RBP7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 IPPKQ9H8X2 491 aa7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 UCK1Q9HA47 277 aa7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 GPR27Q9NS67 375 aa7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 KLC4Q9NSK0 619 aa7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 TMEM140Q9NV12 185 aa7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 P4HTMQ9NXG6 502 aa7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 HMGXB4Q9UGU5 601 aa7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 KCNE2Q9Y6J6 123 aa7.7□□□□□ -1.18
PDGFRA-206ENST00000508170 ARNTLO00327 626 aa7.69□□□□□ -1.18
PDGFRA-206ENST00000508170 SLC16A6O15403 523 aa7.69□□□□□ -1.18
PDGFRA-206ENST00000508170 RHBDL1O75783 438 aa7.69□□□□□ -1.18
PDGFRA-206ENST00000508170 OR2C1O95371 312 aa7.69□□□□□ -1.18
PDGFRA-206ENST00000508170 MATN4O95460 622 aa7.69□□□□□ -1.18
PDGFRA-206ENST00000508170 FHP07954 510 aa7.69□□□□□ -1.18
PDGFRA-206ENST00000508170 UROSP10746 265 aa7.69□□□□□ -1.18
PDGFRA-206ENST00000508170 ITGA4P13612 1032 aa7.69□□□□□ -1.18
PDGFRA-206ENST00000508170 ANPEPP15144 967 aa7.69□□□□□ -1.18
PDGFRA-206ENST00000508170 U2AF2P26368 475 aaKnown RBP eCLIP7.69□□□□□ -1.18
PDGFRA-206ENST00000508170 MAP4P27816 1152 aaKnown RBP7.69□□□□□ -1.18
PDGFRA-206ENST00000508170 GATMP50440 423 aa7.69□□□□□ -1.18
PDGFRA-206ENST00000508170 TAS2R40P59535 323 aa7.69□□□□□ -1.18
PDGFRA-206ENST00000508170 XRCC4Q13426 336 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms