RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 NUDT2P50583 147 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 STAT5BP51692 787 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 CSE1LP55060 971 aaKnown RBP5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 ADARP55265 1226 aaKnown RBP5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 TUBA4AP68366 448 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 RBP5P82980 135 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 SLC6A3Q01959 620 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 SP4Q02446 784 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 ILF2Q12905 390 aaKnown RBP5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 TRAP1Q12931 704 aaKnown RBP5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 PPIL2Q13356 520 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 APOFQ13790 326 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 PDE1CQ14123 709 aaPredicted RBP5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 SPIDRQ14159 915 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 MYBPC3Q14896 1274 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 PDK1Q15118 436 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 TLR1Q15399 786 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 TARBP2Q15633 366 aaKnown RBP5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 DPYSL2Q16555 572 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 LRRC36Q1X8D7 754 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 RALGPS1Q5JS13 557 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 TCHHL1Q5QJ38 904 aaPredicted RBP5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 ZBTB41Q5SVQ8 909 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 ACBD5Q5T8D3 534 aaPredicted RBP5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 ATF7IP2Q5U623 682 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 IRAK1BP1Q5VVH5 260 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 DCAF15Q66K64 600 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 SEL1L3Q68CR1 1132 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 SNRNP48Q6IEG0 339 aaKnown RBP5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 SCYL2Q6P3W7 929 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 ZCCHC23Q6ZST2 131 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 ZNF410Q86VK4 478 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 TTC30AQ86WT1 665 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 HPS6Q86YV9 775 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 ERI1Q8IV48 349 aaKnown RBP5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 C10orf107Q8IVU9 208 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 KIAA0319LQ8IZA0 1049 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 PQLC3Q8N755 202 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 TRIML2Q8N7C3 387 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 POU5F2Q8N7G0 328 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 TDRD5Q8NAT2 981 aaKnown RBP5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 CHST13Q8NET6 341 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 TNIP2Q8NFZ5 429 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 PCDH19Q8TAB3 1148 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 HM13Q8TCT9 377 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 PDCD6IPQ8WUM4 868 aaKnown RBP5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 PRPF31Q8WWY3 499 aaKnown RBP5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 HTR3CQ8WXA8 447 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 CLMNQ96JQ2 1002 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 FAM84AQ96KN4 292 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 GCNAQ96QF7 691 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 PEBP4Q96S96 227 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 GMLQ99445 158 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 SORT1Q99523 831 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 LBHD1Q9BQE6 289 aaPredicted RBP5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 SNRNP25Q9BV90 132 aaKnown RBP5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 NT5C1AQ9BXI3 368 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 TEX13BQ9BXU2 312 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 MRPL1Q9BYD6 325 aaKnown RBP5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 TRIM15Q9C019 465 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 TMEM39BQ9GZU3 492 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 BRD8Q9H0E9 1235 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 ASB7Q9H672 318 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 LRRC40Q9H9A6 602 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 COG4Q9H9E3 785 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 PLGRKTQ9HBL7 147 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 GBA2Q9HCG7 927 aaPredicted RBP5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 NGRNQ9NPE2 291 aaKnown RBP5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 SMYD2Q9NRG4 433 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 VPS45Q9NRW7 570 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 PNPLA3Q9NST1 481 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 TUBA8Q9NY65 449 aaPredicted RBP5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 UTP6Q9NYH9 597 aaKnown RBP5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 CLIC5Q9NZA1 410 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 BTBD7Q9P203 1132 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 RSL24D1Q9UHA3 163 aaKnown RBP5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 CYTH4Q9UIA0 394 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 EMCNQ9ULC0 261 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 FAF1Q9UNN5 650 aaPredicted RBP5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 DOLKQ9UPQ8 538 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 CDYLQ9Y232 598 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 TNFSF13BQ9Y275 285 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 RAP2CQ9Y3L5 183 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 TELO2Q9Y4R8 837 aa5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 MYH9P35579 1960 aaKnown RBP5.07□□□□□ -1.6
HMGB3P16-201ENST00000508037 SMCHD1A6NHR9 2005 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 LOC100653049A0A140TA62 436 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 A0A1B0GVG6 124 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 WDR27A2RRH5 827 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 HMX2A2RU54 273 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 CAPN8A6NHC0 703 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 TRIM38O00635 465 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 ZNF195O14628 629 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 AIM2O14862 343 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 HDAC3O15379 428 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 NCAM2O15394 837 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 UGT1A9O60656 530 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 LYPLA1O75608 230 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 DGKIO75912 1065 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 KRT34O76011 436 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms