RNA–Protein interactions for RNA: ENST00000505551.5

LETM1-203, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-203ENST00000505551 ZFYVE28Q9HCC9 887 aa13.55□□□□□ -0.24
LETM1-203ENST00000505551 SEPT3Q9UH03 358 aa13.55□□□□□ -0.24
LETM1-203ENST00000505551 IPO11Q9UI26 975 aaKnown RBP13.55□□□□□ -0.24
LETM1-203ENST00000505551 DAPK2Q9UIK4 370 aa13.55□□□□□ -0.24
LETM1-203ENST00000505551 POU2F3Q9UKI9 436 aa13.55□□□□□ -0.24
LETM1-203ENST00000505551 HMX2A2RU54 273 aa13.55□□□□□ -0.24
LETM1-203ENST00000505551 POLR2EP19388 210 aaKnown RBP13.55□□□□□ -0.24
LETM1-203ENST00000505551 ME2P23368 584 aa13.55□□□□□ -0.24
LETM1-203ENST00000505551 RPL10P27635 214 aaKnown RBP13.55□□□□□ -0.24
LETM1-203ENST00000505551 MSX2P35548 267 aaPredicted RBP13.55□□□□□ -0.24
LETM1-203ENST00000505551 EIF3EP60228 445 aaKnown RBP13.55□□□□□ -0.24
LETM1-203ENST00000505551 RPL10AP62906 217 aaKnown RBP13.55□□□□□ -0.24
LETM1-203ENST00000505551 OTUD4Q01804 1114 aaKnown RBP13.55□□□□□ -0.24
LETM1-203ENST00000505551 GNA12Q03113 381 aa13.55□□□□□ -0.24
LETM1-203ENST00000505551 PMS2P3Q13401 168 aa13.55□□□□□ -0.24
LETM1-203ENST00000505551 TRPC3Q13507 836 aa13.55□□□□□ -0.24
LETM1-203ENST00000505551 TNFAIP1Q13829 316 aa13.55□□□□□ -0.24
LETM1-203ENST00000505551 RAB39AQ14964 217 aa13.55□□□□□ -0.24
LETM1-203ENST00000505551 NHSL2Q5HYW2 709 aa13.55□□□□□ -0.24
LETM1-203ENST00000505551 DAW1Q8N136 415 aa13.55□□□□□ -0.24
LETM1-203ENST00000505551 MINDY2Q8NBR6 621 aa13.55□□□□□ -0.24
LETM1-203ENST00000505551 FEZF2Q8TBJ5 459 aa13.55□□□□□ -0.24
LETM1-203ENST00000505551 LXNQ9BS40 222 aa13.55□□□□□ -0.24
LETM1-203ENST00000505551 C1orf50Q9BV19 199 aa13.55□□□□□ -0.24
LETM1-203ENST00000505551 SLC4A5Q9BY07 1137 aa13.55□□□□□ -0.24
LETM1-203ENST00000505551 KLHL25Q9H0H3 589 aa13.55□□□□□ -0.24
LETM1-203ENST00000505551 VPS33BQ9H267 617 aa13.55□□□□□ -0.24
LETM1-203ENST00000505551 DUS2Q9NX74 493 aaKnown RBP13.55□□□□□ -0.24
LETM1-203ENST00000505551 PCDHB2Q9Y5E7 798 aa13.55□□□□□ -0.24
LETM1-203ENST00000505551 K7ENM7 598 aa13.54□□□□□ -0.24
LETM1-203ENST00000505551 TOP3BO95985 862 aaKnown RBP13.54□□□□□ -0.24
LETM1-203ENST00000505551 ARRB2P32121 409 aa13.54□□□□□ -0.24
LETM1-203ENST00000505551 GRSF1Q12849 480 aaKnown RBP eCLIP13.54□□□□□ -0.24
LETM1-203ENST00000505551 E2F2Q14209 437 aa13.54□□□□□ -0.24
LETM1-203ENST00000505551 GALNT18Q6P9A2 607 aa13.54□□□□□ -0.24
LETM1-203ENST00000505551 POLNQ7Z5Q5 900 aa13.54□□□□□ -0.24
LETM1-203ENST00000505551 ZBTB46Q86UZ6 589 aa13.54□□□□□ -0.24
LETM1-203ENST00000505551 MMAAQ8IVH4 418 aaKnown RBP13.54□□□□□ -0.24
LETM1-203ENST00000505551 TAS1R2Q8TE23 839 aa13.54□□□□□ -0.24
LETM1-203ENST00000505551 RSAD2Q8WXG1 361 aa13.54□□□□□ -0.24
LETM1-203ENST00000505551 CFAP36Q96G28 342 aa13.54□□□□□ -0.24
LETM1-203ENST00000505551 SLC29A1Q99808 456 aa13.54□□□□□ -0.24
LETM1-203ENST00000505551 TMEM8AQ9HCN3 771 aa13.54□□□□□ -0.24
LETM1-203ENST00000505551 SMYD2Q9NRG4 433 aa13.54□□□□□ -0.24
LETM1-203ENST00000505551 NDFIP2Q9NV92 336 aa13.54□□□□□ -0.24
LETM1-203ENST00000505551 EMCNQ9ULC0 261 aa13.54□□□□□ -0.24
LETM1-203ENST00000505551 SCN4AP35499 1836 aa13.54□□□□□ -0.24
LETM1-203ENST00000505551 TRDMT1O14717 391 aaKnown RBP13.54□□□□□ -0.24
LETM1-203ENST00000505551 ALOX5P09917 674 aa13.54□□□□□ -0.24
LETM1-203ENST00000505551 RPL17P18621 184 aaKnown RBP13.54□□□□□ -0.24
LETM1-203ENST00000505551 POLD2P49005 469 aa13.54□□□□□ -0.24
LETM1-203ENST00000505551 PKNOX1P55347 436 aa13.54□□□□□ -0.24
LETM1-203ENST00000505551 ZNF280AP59817 542 aaPredicted RBP13.54□□□□□ -0.24
LETM1-203ENST00000505551 NOMO3P69849 1222 aa13.54□□□□□ -0.24
LETM1-203ENST00000505551 BASP1P80723 227 aaKnown RBP13.54□□□□□ -0.24
LETM1-203ENST00000505551 MRPS9P82933 396 aaKnown RBP13.54□□□□□ -0.24
LETM1-203ENST00000505551 GCNT1Q02742 428 aa13.54□□□□□ -0.24
LETM1-203ENST00000505551 ZNF252P-AS1Q0IIN9 211 aa13.54□□□□□ -0.24
LETM1-203ENST00000505551 TIGD2Q4W5G0 525 aa13.54□□□□□ -0.24
LETM1-203ENST00000505551 TXNRD3NBQ6F5E7 133 aa13.54□□□□□ -0.24
LETM1-203ENST00000505551 ENOSF1Q7L5Y1 443 aa13.54□□□□□ -0.24
LETM1-203ENST00000505551 PHF13Q86YI8 300 aaPredicted RBP13.54□□□□□ -0.24
LETM1-203ENST00000505551 BRSK2Q8IWQ3 736 aa13.54□□□□□ -0.24
LETM1-203ENST00000505551 PGAM4Q8N0Y7 254 aa13.54□□□□□ -0.24
LETM1-203ENST00000505551 TFAP2CQ92754 450 aa13.54□□□□□ -0.24
LETM1-203ENST00000505551 CNDP2Q96KP4 475 aaKnown RBP13.54□□□□□ -0.24
LETM1-203ENST00000505551 MXRA8Q9BRK3 442 aa13.54□□□□□ -0.24
LETM1-203ENST00000505551 BEGAINQ9BUH8 593 aa13.54□□□□□ -0.24
LETM1-203ENST00000505551 NAA50Q9GZZ1 169 aaKnown RBP13.54□□□□□ -0.24
LETM1-203ENST00000505551 PLAC1Q9HBJ0 212 aa13.54□□□□□ -0.24
LETM1-203ENST00000505551 KLHL41O60662 606 aa13.53□□□□□ -0.24
LETM1-203ENST00000505551 S100BP04271 92 aaPredicted RBP13.53□□□□□ -0.24
LETM1-203ENST00000505551 PCNAP12004 261 aa13.53□□□□□ -0.24
LETM1-203ENST00000505551 CD1EP15812 388 aa13.53□□□□□ -0.24
LETM1-203ENST00000505551 PIK3R1P27986 724 aa13.53□□□□□ -0.24
LETM1-203ENST00000505551 HARS2P49590 506 aaKnown RBP13.53□□□□□ -0.24
LETM1-203ENST00000505551 SLC10A2Q12908 348 aaPredicted RBP13.53□□□□□ -0.24
LETM1-203ENST00000505551 SELENBP1Q13228 472 aa13.53□□□□□ -0.24
LETM1-203ENST00000505551 KCNJ11Q14654 390 aa13.53□□□□□ -0.24
LETM1-203ENST00000505551 TOMM20Q15388 145 aa13.53□□□□□ -0.24
LETM1-203ENST00000505551 TIFABQ6ZNK6 161 aa13.53□□□□□ -0.24
LETM1-203ENST00000505551 SNX32Q86XE0 403 aa13.53□□□□□ -0.24
LETM1-203ENST00000505551 UNC45BQ8IWX7 931 aa13.53□□□□□ -0.24
LETM1-203ENST00000505551 PDPRQ8NCN5 879 aa13.53□□□□□ -0.24
LETM1-203ENST00000505551 FBXL13Q8NEE6 735 aa13.53□□□□□ -0.24
LETM1-203ENST00000505551 SYTL5Q8TDW5 730 aaPredicted RBP13.53□□□□□ -0.24
LETM1-203ENST00000505551 SCYL1Q96KG9 808 aa13.53□□□□□ -0.24
LETM1-203ENST00000505551 DDX56Q9NY93 547 aaKnown RBP13.53□□□□□ -0.24
LETM1-203ENST00000505551 ANKMY1Q9P2S6 941 aa13.53□□□□□ -0.24
LETM1-203ENST00000505551 SAE1Q9UBE0 346 aaPredicted RBP13.53□□□□□ -0.24
LETM1-203ENST00000505551 AKAP10O43572 662 aa13.53□□□□□ -0.24
LETM1-203ENST00000505551 KCNJ13O60928 360 aa13.53□□□□□ -0.24
LETM1-203ENST00000505551 CSH1P0DML2 217 aa13.53□□□□□ -0.24
LETM1-203ENST00000505551 CSH2P0DML3 217 aa13.53□□□□□ -0.24
LETM1-203ENST00000505551 UBL4AP11441 157 aa13.53□□□□□ -0.24
LETM1-203ENST00000505551 ZNF182P17025 639 aaPredicted RBP13.53□□□□□ -0.24
LETM1-203ENST00000505551 GLDCP23378 1020 aa13.53□□□□□ -0.24
LETM1-203ENST00000505551 GRK2P25098 689 aa13.53□□□□□ -0.24
LETM1-203ENST00000505551 GRM5P41594 1212 aa13.53□□□□□ -0.24
LETM1-203ENST00000505551 NLRP11P59045 1033 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms