RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 DUOXA1Q1HG43 343 aa14.64□□□□□ -0.07
HOXC9-202ENST00000504557 ARL13BQ3SXY8 428 aa14.64□□□□□ -0.07
HOXC9-202ENST00000504557 WDR45BQ5MNZ6 344 aa14.64□□□□□ -0.07
HOXC9-202ENST00000504557 C9orf64Q5T6V5 341 aa14.64□□□□□ -0.07
HOXC9-202ENST00000504557 E4F1Q66K89 784 aaPredicted RBP14.64□□□□□ -0.07
HOXC9-202ENST00000504557 ACAD10Q6JQN1 1059 aa14.64□□□□□ -0.07
HOXC9-202ENST00000504557 DCUN1D2Q6PH85 259 aa14.64□□□□□ -0.07
HOXC9-202ENST00000504557 WDR59Q6PJI9 974 aa14.64□□□□□ -0.07
HOXC9-202ENST00000504557 LINGO4Q6UY18 593 aa14.64□□□□□ -0.07
HOXC9-202ENST00000504557 IRF2BP2Q7Z5L9 587 aa14.64□□□□□ -0.07
HOXC9-202ENST00000504557 CCDC185Q8N715 623 aa14.64□□□□□ -0.07
HOXC9-202ENST00000504557 C3orf20Q8ND61 904 aa14.64□□□□□ -0.07
HOXC9-202ENST00000504557 OR7D4Q8NG98 312 aa14.64□□□□□ -0.07
HOXC9-202ENST00000504557 ZNF419Q96HQ0 510 aaPredicted RBP14.64□□□□□ -0.07
HOXC9-202ENST00000504557 OMDQ99983 421 aa14.64□□□□□ -0.07
HOXC9-202ENST00000504557 RSPH9Q9H1X1 276 aaPredicted RBP14.64□□□□□ -0.07
HOXC9-202ENST00000504557 C6orf106Q9H6K1 298 aaPredicted RBP14.64□□□□□ -0.07
HOXC9-202ENST00000504557 FBRSQ9HAH7 460 aa14.64□□□□□ -0.07
HOXC9-202ENST00000504557 FBXL12Q9NXK8 326 aa14.64□□□□□ -0.07
HOXC9-202ENST00000504557 EIF2B4Q9UI10 523 aaKnown RBP14.64□□□□□ -0.07
HOXC9-202ENST00000504557 NCKAP1Q9Y2A7 1128 aa14.64□□□□□ -0.07
HOXC9-202ENST00000504557 PCDH15Q96QU1 1955 aa14.64□□□□□ -0.07
HOXC9-202ENST00000504557 CACNA1EQ15878 2313 aa14.63□□□□□ -0.07
HOXC9-202ENST00000504557 A0A0D9SEW6 157 aa14.63□□□□□ -0.07
HOXC9-202ENST00000504557 A0A1W2PQC6 194 aa14.63□□□□□ -0.07
HOXC9-202ENST00000504557 PLK4O00444 970 aa14.63□□□□□ -0.07
HOXC9-202ENST00000504557 CCP110O43303 1012 aa14.63□□□□□ -0.07
HOXC9-202ENST00000504557 ENDOD1O94919 500 aa14.63□□□□□ -0.07
HOXC9-202ENST00000504557 SEMA4FO95754 770 aa14.63□□□□□ -0.07
HOXC9-202ENST00000504557 IL1BP01584 269 aa14.63□□□□□ -0.07
HOXC9-202ENST00000504557 GNSP15586 552 aa14.63□□□□□ -0.07
HOXC9-202ENST00000504557 GLDCP23378 1020 aa14.63□□□□□ -0.07
HOXC9-202ENST00000504557 ADRA1BP35368 520 aa14.63□□□□□ -0.07
HOXC9-202ENST00000504557 DPP6P42658 865 aa14.63□□□□□ -0.07
HOXC9-202ENST00000504557 PLK1P53350 603 aa14.63□□□□□ -0.07
HOXC9-202ENST00000504557 RPL7AP62424 266 aaKnown RBP14.63□□□□□ -0.07
HOXC9-202ENST00000504557 C1QBPQ07021 282 aaKnown RBP14.63□□□□□ -0.07
HOXC9-202ENST00000504557 KLHL30Q0D2K2 578 aa14.63□□□□□ -0.07
HOXC9-202ENST00000504557 NR1I3Q14994 352 aa14.63□□□□□ -0.07
HOXC9-202ENST00000504557 CST6Q15828 149 aa14.63□□□□□ -0.07
HOXC9-202ENST00000504557 Q6ZVU0 165 aa14.63□□□□□ -0.07
HOXC9-202ENST00000504557 ZNF683Q8IZ20 524 aa14.63□□□□□ -0.07
HOXC9-202ENST00000504557 MCOLN2Q8IZK6 566 aa14.63□□□□□ -0.07
HOXC9-202ENST00000504557 ATP11CQ8NB49 1132 aa14.63□□□□□ -0.07
HOXC9-202ENST00000504557 CEP76Q8TAP6 659 aa14.63□□□□□ -0.07
HOXC9-202ENST00000504557 PTPRN2Q92932 1015 aa14.63□□□□□ -0.07
HOXC9-202ENST00000504557 HAPLN3Q96S86 360 aa14.63□□□□□ -0.07
HOXC9-202ENST00000504557 PPP1R9BQ96SB3 815 aa14.63□□□□□ -0.07
HOXC9-202ENST00000504557 ZYG11BQ9C0D3 744 aa14.63□□□□□ -0.07
HOXC9-202ENST00000504557 BTBD1Q9H0C5 482 aa14.63□□□□□ -0.07
HOXC9-202ENST00000504557 PABPC3Q9H361 631 aaKnown RBP14.63□□□□□ -0.07
HOXC9-202ENST00000504557 OR12D3Q9UGF7 316 aa14.63□□□□□ -0.07
HOXC9-202ENST00000504557 SERGEFQ9UGK8 458 aa14.63□□□□□ -0.07
HOXC9-202ENST00000504557 EVLQ9UI08 416 aaPredicted RBP14.63□□□□□ -0.07
HOXC9-202ENST00000504557 SLC6A14Q9UN76 642 aa14.63□□□□□ -0.07
HOXC9-202ENST00000504557 ITIH6Q6UXX5 1313 aa14.63□□□□□ -0.07
HOXC9-202ENST00000504557 TARSL2A2RTX5 802 aaKnown RBP14.62□□□□□ -0.07
HOXC9-202ENST00000504557 SIGLEC16A6NMB1 481 aa14.62□□□□□ -0.07
HOXC9-202ENST00000504557 METTL12A8MUP2 240 aa14.62□□□□□ -0.07
HOXC9-202ENST00000504557 K7ERQ8 282 aa14.62□□□□□ -0.07
HOXC9-202ENST00000504557 CBX4O00257 560 aa14.62□□□□□ -0.07
HOXC9-202ENST00000504557 SLC8A1P32418 973 aa14.62□□□□□ -0.07
HOXC9-202ENST00000504557 PTPN9P43378 593 aa14.62□□□□□ -0.07
HOXC9-202ENST00000504557 METAP1P53582 386 aa14.62□□□□□ -0.07
HOXC9-202ENST00000504557 LIMK1P53667 647 aa14.62□□□□□ -0.07
HOXC9-202ENST00000504557 HDAC4P56524 1084 aa14.62□□□□□ -0.07
HOXC9-202ENST00000504557 KRT83P78385 493 aa14.62□□□□□ -0.07
HOXC9-202ENST00000504557 DNAH14Q0VDD8 3507 aa14.62□□□□□ -0.07
HOXC9-202ENST00000504557 DLG2Q15700 870 aa14.62□□□□□ -0.07
HOXC9-202ENST00000504557 C5orf22Q49AR2 442 aa14.62□□□□□ -0.07
HOXC9-202ENST00000504557 TDRD12Q587J7 1177 aaKnown RBP14.62□□□□□ -0.07
HOXC9-202ENST00000504557 C6orf118Q5T5N4 469 aa14.62□□□□□ -0.07
HOXC9-202ENST00000504557 DAB2IPQ5VWQ8 1189 aa14.62□□□□□ -0.07
HOXC9-202ENST00000504557 SLC23A3Q6PIS1 610 aa14.62□□□□□ -0.07
HOXC9-202ENST00000504557 ARCQ7LC44 396 aa14.62□□□□□ -0.07
HOXC9-202ENST00000504557 STRADAQ7RTN6 431 aa14.62□□□□□ -0.07
HOXC9-202ENST00000504557 ZNF571Q7Z3V5 609 aaPredicted RBP14.62□□□□□ -0.07
HOXC9-202ENST00000504557 BNIPLQ7Z465 357 aa14.62□□□□□ -0.07
HOXC9-202ENST00000504557 KNL1Q8NG31 2342 aa14.62□□□□□ -0.07
HOXC9-202ENST00000504557 ALG14Q96F25 216 aa14.62□□□□□ -0.07
HOXC9-202ENST00000504557 C1orf74Q96LT6 269 aa14.62□□□□□ -0.07
HOXC9-202ENST00000504557 PSMB7Q99436 277 aa14.62□□□□□ -0.07
HOXC9-202ENST00000504557 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.62□□□□□ -0.07
HOXC9-202ENST00000504557 IFNKQ9P0W0 207 aa14.62□□□□□ -0.07
HOXC9-202ENST00000504557 MYO1AQ9UBC5 1043 aa14.62□□□□□ -0.07
HOXC9-202ENST00000504557 DNAI1Q9UI46 699 aa14.62□□□□□ -0.07
HOXC9-202ENST00000504557 VPS51Q9UID3 782 aa14.62□□□□□ -0.07
HOXC9-202ENST00000504557 MYO6Q9UM54 1294 aa14.62□□□□□ -0.07
HOXC9-202ENST00000504557 TBC1D30Q9Y2I9 924 aa14.62□□□□□ -0.07
HOXC9-202ENST00000504557 CHD5Q8TDI0 1954 aa14.62□□□□□ -0.07
HOXC9-202ENST00000504557 DRGXA6NNA5 263 aa14.61□□□□□ -0.07
HOXC9-202ENST00000504557 FAM72CH0Y354 149 aa14.61□□□□□ -0.07
HOXC9-202ENST00000504557 CDX4O14627 284 aaPredicted RBP14.61□□□□□ -0.07
HOXC9-202ENST00000504557 CREB3O43889 395 aa14.61□□□□□ -0.07
HOXC9-202ENST00000504557 MT-CO1P00395 513 aa14.61□□□□□ -0.07
HOXC9-202ENST00000504557 IGLV3-19P01714 112 aa14.61□□□□□ -0.07
HOXC9-202ENST00000504557 PLEKP08567 350 aaPredicted RBP14.61□□□□□ -0.07
HOXC9-202ENST00000504557 SERPINF2P08697 491 aa14.61□□□□□ -0.07
HOXC9-202ENST00000504557 ZBTB16Q05516 673 aa14.61□□□□□ -0.07
HOXC9-202ENST00000504557 SKOR2Q2VWA4 1001 aaPredicted RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms