RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 MSTO1Q9BUK6 570 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 FRMD8Q9BZ67 464 aaPredicted RBP3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 RNF38Q9H0F5 515 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 RUBCNLQ9H714 662 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 TMBIM4Q9HC24 238 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 NDE1Q9NXR1 346 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 KLHL8Q9P2G9 620 aaPredicted RBP3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 MROH7-TTC4A0A0A0MT08 1334 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 IQANK1A0A1B0GTG1 560 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 TMEM120BA0PK00 339 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 TRIM64A6NGJ6 449 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 NFKBIEO00221 500 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 TRAFD1O14545 582 aaPredicted RBP3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 AIM2O14862 343 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 CA12O43570 354 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 MAFO75444 373 aaPredicted RBP3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 CTDNEP1O95476 244 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 APRTP07741 180 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 HBQ1P09105 142 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 MCF2P10911 925 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 CD247P20963 164 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 TARSP26639 723 aaKnown RBP3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 TYK2P29597 1187 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 HTR7P34969 479 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 TIE1P35590 1138 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 ARSEP51690 589 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 ARL4CP56559 192 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 ATP6V0D1P61421 351 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 CAPRIN1Q14444 709 aaKnown RBP3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 MORF4L2Q15014 288 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 C21orf62-AS1Q17RA5 79 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 ZNF568Q3ZCX4 644 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 ASPRV1Q53RT3 343 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 FAXCQ5TGI0 409 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 CLEC2AQ6UVW9 174 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 CREG2Q8IUH2 290 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 TLCD1Q96CP7 247 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 CASD1Q96PB1 797 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 SMAD5Q99717 465 aaKnown RBP3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 TRIM9Q9C026 710 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 INTS2Q9H0H0 1204 aaKnown RBP3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 ASCC2Q9H1I8 757 aaPredicted RBP3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 UPF3AQ9H1J1 476 aaKnown RBP3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 TRABDQ9H4I3 376 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 IL1RL2Q9HB29 575 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 DCP1AQ9NPI6 582 aaPredicted RBP3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 AIPL1Q9NZN9 384 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 TBC1D14Q9P2M4 693 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 FBXO2Q9UK22 296 aaPredicted RBP3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 PCDHA6Q9UN73 950 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 EDARQ9UNE0 448 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 PCDHA8Q9Y5H6 950 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 UTYO14607 1347 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 DENND4AQ7Z401 1863 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 DENND3A2RUS2 1198 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 SYCE1LA8MT33 242 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 FADS2P1A8MWK0 482 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 B2RBV5 119 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 H0Y626 953 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 ZBTB39O15060 712 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 DYNC1LI2O43237 492 aaPredicted RBP3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 PHF2O75151 1096 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 ENTPD5O75356 428 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 MOCS2O96007 188 aaPredicted RBP3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 AKR1B1P15121 316 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 PFKLP17858 780 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 TGM1P22735 817 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 ARNTP27540 789 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 SERPINB3P29508 390 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 ACOT2P49753 483 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 ARSDP51689 593 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 BLVRAP53004 296 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 VCPP55072 806 aaKnown RBP3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 PSMC5P62195 406 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 YWHAEP62258 255 aaKnown RBP3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 CLDN10P78369 228 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 MLLT1Q03111 559 aaPredicted RBP3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 TAP1Q03518 808 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 ITIH4Q14624 930 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 NR1I3Q14994 352 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 DUSP7Q16829 419 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 PFKFB3Q16875 520 aaPredicted RBP3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 KNOP1Q1ED39 458 aaKnown RBP3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 EML3Q32P44 896 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 VARS2Q5ST30 1063 aaKnown RBP3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 ANGEL2Q5VTE6 544 aaKnown RBP3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 ARL6IP4Q66PJ3 421 aaKnown RBP3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 ATG16L1Q676U5 607 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 PADI6Q6TGC4 694 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 ABRAXAS1Q6UWZ7 409 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 CYS1Q717R9 158 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 ZBTB46Q86UZ6 589 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 ZNF410Q86VK4 478 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 SLC22A9Q8IVM8 553 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 FAM9CQ8IZT9 166 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 CENPSQ8N2Z9 138 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 XXYLT1Q8NBI6 393 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 SLC35G2Q8TBE7 412 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 DNAJC9Q8WXX5 260 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 ATG4AQ8WYN0 398 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms