RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 ITIH4Q14624 930 aa21.81■■□□□ 1.08
UBE2D3-216ENST00000503742 PSMD5Q16401 504 aa21.81■■□□□ 1.08
UBE2D3-216ENST00000503742 PDK4Q16654 411 aa21.81■■□□□ 1.08
UBE2D3-216ENST00000503742 C10orf120Q5SQS8 335 aa21.81■■□□□ 1.08
UBE2D3-216ENST00000503742 LVRNQ6Q4G3 990 aa21.81■■□□□ 1.08
UBE2D3-216ENST00000503742 MARK2Q7KZI7 788 aaKnown RBP21.81■■□□□ 1.08
UBE2D3-216ENST00000503742 UNC5BQ8IZJ1 945 aa21.81■■□□□ 1.08
UBE2D3-216ENST00000503742 GIPC2Q8TF65 315 aa21.81■■□□□ 1.08
UBE2D3-216ENST00000503742 ZNF419Q96HQ0 510 aaPredicted RBP21.81■■□□□ 1.08
UBE2D3-216ENST00000503742 NOL6Q9H6R4 1146 aaKnown RBP21.81■■□□□ 1.08
UBE2D3-216ENST00000503742 VANGL2Q9ULK5 521 aa21.81■■□□□ 1.08
UBE2D3-216ENST00000503742 LTBP2Q14767 1821 aa21.81■■□□□ 1.08
UBE2D3-216ENST00000503742 MYO1CO00159 1063 aa21.81■■□□□ 1.08
UBE2D3-216ENST00000503742 USP12O75317 370 aa21.81■■□□□ 1.08
UBE2D3-216ENST00000503742 RHOQP17081 205 aa21.81■■□□□ 1.08
UBE2D3-216ENST00000503742 RING1Q06587 406 aa21.81■■□□□ 1.08
UBE2D3-216ENST00000503742 UMODL1-AS1Q8N2C9 162 aa21.81■■□□□ 1.08
UBE2D3-216ENST00000503742 MTBPQ96DY7 904 aa21.81■■□□□ 1.08
UBE2D3-216ENST00000503742 APOPT1Q96IL0 206 aa21.81■■□□□ 1.08
UBE2D3-216ENST00000503742 UBE2OQ9C0C9 1292 aaKnown RBP21.81■■□□□ 1.08
UBE2D3-216ENST00000503742 LRRC40Q9H9A6 602 aa21.81■■□□□ 1.08
UBE2D3-216ENST00000503742 HMX2A2RU54 273 aa21.8■■□□□ 1.08
UBE2D3-216ENST00000503742 ANKRD65E5RJM6 399 aa21.8■■□□□ 1.08
UBE2D3-216ENST00000503742 KRT38O76015 456 aa21.8■■□□□ 1.08
UBE2D3-216ENST00000503742 PYGBP11216 843 aa21.8■■□□□ 1.08
UBE2D3-216ENST00000503742 OR1D2P34982 312 aa21.8■■□□□ 1.08
UBE2D3-216ENST00000503742 RFC2P35250 354 aa21.8■■□□□ 1.08
UBE2D3-216ENST00000503742 SERPINB9P50453 376 aa21.8■■□□□ 1.08
UBE2D3-216ENST00000503742 PRPSAP1Q14558 356 aa21.8■■□□□ 1.08
UBE2D3-216ENST00000503742 HHATQ5VTY9 493 aa21.8■■□□□ 1.08
UBE2D3-216ENST00000503742 TIGD7Q6NT04 549 aaPredicted RBP21.8■■□□□ 1.08
UBE2D3-216ENST00000503742 ZNF449Q6P9G9 518 aa21.8■■□□□ 1.08
UBE2D3-216ENST00000503742 OTOP3Q7RTS5 596 aa21.8■■□□□ 1.08
UBE2D3-216ENST00000503742 MIB1Q86YT6 1006 aa21.8■■□□□ 1.08
UBE2D3-216ENST00000503742 ZNF276Q8N554 614 aa21.8■■□□□ 1.08
UBE2D3-216ENST00000503742 USP33Q8TEY7 942 aa21.8■■□□□ 1.08
UBE2D3-216ENST00000503742 FCRL5Q96RD9 977 aa21.8■■□□□ 1.08
UBE2D3-216ENST00000503742 ZYG11BQ9C0D3 744 aa21.8■■□□□ 1.08
UBE2D3-216ENST00000503742 RASSF4Q9H2L5 321 aa21.8■■□□□ 1.08
UBE2D3-216ENST00000503742 TMEM39AQ9NV64 488 aa21.8■■□□□ 1.08
UBE2D3-216ENST00000503742 TMEM248Q9NWD8 314 aa21.8■■□□□ 1.08
UBE2D3-216ENST00000503742 ATP11BQ9Y2G3 1177 aa21.8■■□□□ 1.08
UBE2D3-216ENST00000503742 PSMD3O43242 534 aa21.79■■□□□ 1.08
UBE2D3-216ENST00000503742 LPXNO60711 386 aa21.79■■□□□ 1.08
UBE2D3-216ENST00000503742 RFPL1O75677 317 aa21.79■■□□□ 1.08
UBE2D3-216ENST00000503742 POLBP06746 335 aa21.79■■□□□ 1.08
UBE2D3-216ENST00000503742 RPL17P18621 184 aaKnown RBP21.79■■□□□ 1.08
UBE2D3-216ENST00000503742 PAPOLAP51003 745 aaKnown RBP21.79■■□□□ 1.08
UBE2D3-216ENST00000503742 SPANXN3Q5MJ09 141 aa21.79■■□□□ 1.08
UBE2D3-216ENST00000503742 TOP1MTQ969P6 601 aa21.79■■□□□ 1.08
UBE2D3-216ENST00000503742 CCSER2Q9H7U1 834 aa21.79■■□□□ 1.08
UBE2D3-216ENST00000503742 BFARQ9NZS9 450 aa21.79■■□□□ 1.08
UBE2D3-216ENST00000503742 MRPL42Q9Y6G3 142 aaKnown RBP21.79■■□□□ 1.08
UBE2D3-216ENST00000503742 GOLGA6L7A0A1B0GV03 622 aa21.79■■□□□ 1.08
UBE2D3-216ENST00000503742 SLC12A8A0AV02 714 aa21.79■■□□□ 1.08
UBE2D3-216ENST00000503742 TLR5O60602 858 aa21.79■■□□□ 1.08
UBE2D3-216ENST00000503742 ADRA1DP25100 572 aa21.79■■□□□ 1.08
UBE2D3-216ENST00000503742 CCNFP41002 786 aa21.79■■□□□ 1.08
UBE2D3-216ENST00000503742 TUFMP49411 452 aaKnown RBP21.79■■□□□ 1.08
UBE2D3-216ENST00000503742 NDST2P52849 883 aa21.79■■□□□ 1.08
UBE2D3-216ENST00000503742 NAB1Q13506 487 aa21.79■■□□□ 1.08
UBE2D3-216ENST00000503742 ACBD5Q5T8D3 534 aaPredicted RBP21.79■■□□□ 1.08
UBE2D3-216ENST00000503742 TMEM135Q86UB9 458 aa21.79■■□□□ 1.08
UBE2D3-216ENST00000503742 ANKS4BQ8N8V4 417 aa21.79■■□□□ 1.08
UBE2D3-216ENST00000503742 ZNF689Q96CS4 500 aaPredicted RBP21.79■■□□□ 1.08
UBE2D3-216ENST00000503742 GLOD4Q9HC38 313 aa21.79■■□□□ 1.08
UBE2D3-216ENST00000503742 SLC17A7Q9P2U7 560 aa21.79■■□□□ 1.08
UBE2D3-216ENST00000503742 DRGXA6NNA5 263 aa21.78■■□□□ 1.08
UBE2D3-216ENST00000503742 DHRS4L1P0CG22 281 aa21.78■■□□□ 1.08
UBE2D3-216ENST00000503742 CNTFP26441 200 aa21.78■■□□□ 1.08
UBE2D3-216ENST00000503742 ETV4P43268 484 aa21.78■■□□□ 1.08
UBE2D3-216ENST00000503742 NPY2RP49146 381 aa21.78■■□□□ 1.08
UBE2D3-216ENST00000503742 FRG1Q14331 258 aaKnown RBP21.78■■□□□ 1.08
UBE2D3-216ENST00000503742 NAPEPLDQ6IQ20 393 aa21.78■■□□□ 1.08
UBE2D3-216ENST00000503742 CGB2Q6NT52 195 aa21.78■■□□□ 1.08
UBE2D3-216ENST00000503742 FBXL22Q6P050 247 aa21.78■■□□□ 1.08
UBE2D3-216ENST00000503742 DNAAF3Q8N9W5 541 aa21.78■■□□□ 1.08
UBE2D3-216ENST00000503742 ZNF333Q96JL9 665 aa21.78■■□□□ 1.08
UBE2D3-216ENST00000503742 FCRL3Q96P31 734 aaPredicted RBP21.78■■□□□ 1.08
UBE2D3-216ENST00000503742 CLSTN3Q9BQT9 956 aa21.78■■□□□ 1.08
UBE2D3-216ENST00000503742 ZNF212Q9UDV6 495 aa21.78■■□□□ 1.08
UBE2D3-216ENST00000503742 AAR2Q9Y312 384 aaKnown RBP21.78■■□□□ 1.08
UBE2D3-216ENST00000503742 RPS6KL1Q9Y6S9 549 aa21.78■■□□□ 1.08
UBE2D3-216ENST00000503742 CNTN5O94779 1100 aa21.78■■□□□ 1.08
UBE2D3-216ENST00000503742 KIAA0754O94854 1291 aa21.78■■□□□ 1.08
UBE2D3-216ENST00000503742 CLTBP09497 229 aa21.78■■□□□ 1.08
UBE2D3-216ENST00000503742 ALADP13716 330 aa21.78■■□□□ 1.08
UBE2D3-216ENST00000503742 BMPR2Q13873 1038 aa21.78■■□□□ 1.08
UBE2D3-216ENST00000503742 ZKSCAN8Q15776 578 aaPredicted RBP21.78■■□□□ 1.08
UBE2D3-216ENST00000503742 ALFQ53S48 1182 aa21.78■■□□□ 1.08
UBE2D3-216ENST00000503742 TIFABQ6ZNK6 161 aa21.78■■□□□ 1.08
UBE2D3-216ENST00000503742 CDKL2Q92772 493 aa21.78■■□□□ 1.08
UBE2D3-216ENST00000503742 FATE1Q969F0 183 aa21.78■■□□□ 1.08
UBE2D3-216ENST00000503742 IGSF8Q969P0 613 aa21.78■■□□□ 1.08
UBE2D3-216ENST00000503742 C12orf65Q9H3J6 166 aaKnown RBP21.78■■□□□ 1.08
UBE2D3-216ENST00000503742 RC3H2Q9HBD1 1191 aaKnown RBP21.78■■□□□ 1.08
UBE2D3-216ENST00000503742 MKS1Q9NXB0 559 aa21.78■■□□□ 1.08
UBE2D3-216ENST00000503742 DONSONQ9NYP3 566 aa21.78■■□□□ 1.08
UBE2D3-216ENST00000503742 UBP1Q9NZI7 540 aa21.78■■□□□ 1.08
UBE2D3-216ENST00000503742 AFF4Q9UHB7 1163 aaKnown RBP21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms