RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 CNPP09543 421 aaKnown RBP2.7□□□□□ -1.98
HMGB1P35-201ENST00000503360 CSF1P09603 554 aa2.7□□□□□ -1.98
HMGB1P35-201ENST00000503360 ALDOCP09972 364 aaKnown RBP2.7□□□□□ -1.98
HMGB1P35-201ENST00000503360 CYP2A6P11509 494 aaPredicted RBP2.7□□□□□ -1.98
HMGB1P35-201ENST00000503360 ACP5P13686 325 aa2.7□□□□□ -1.98
HMGB1P35-201ENST00000503360 PRF1P14222 555 aa2.7□□□□□ -1.98
HMGB1P35-201ENST00000503360 CPA1P15085 419 aa2.7□□□□□ -1.98
HMGB1P35-201ENST00000503360 IGFBP2P18065 325 aa2.7□□□□□ -1.98
HMGB1P35-201ENST00000503360 HTR6P50406 440 aa2.7□□□□□ -1.98
HMGB1P35-201ENST00000503360 ZNF84P51523 738 aa2.7□□□□□ -1.98
HMGB1P35-201ENST00000503360 SLC37A1P57057 533 aa2.7□□□□□ -1.98
HMGB1P35-201ENST00000503360 SHC2P98077 582 aa2.7□□□□□ -1.98
HMGB1P35-201ENST00000503360 CHRNDQ07001 517 aa2.7□□□□□ -1.98
HMGB1P35-201ENST00000503360 CDK18Q07002 472 aa2.7□□□□□ -1.98
HMGB1P35-201ENST00000503360 ANKRD1Q15327 319 aa2.7□□□□□ -1.98
HMGB1P35-201ENST00000503360 DLGAP5Q15398 846 aa2.7□□□□□ -1.98
HMGB1P35-201ENST00000503360 CERKLQ49MI3 558 aaPredicted RBP2.7□□□□□ -1.98
HMGB1P35-201ENST00000503360 TMEM88Q6PEY1 159 aa2.7□□□□□ -1.98
HMGB1P35-201ENST00000503360 PIP4P1Q86T03 277 aa2.7□□□□□ -1.98
HMGB1P35-201ENST00000503360 ANKRD44Q8N8A2 993 aa2.7□□□□□ -1.98
HMGB1P35-201ENST00000503360 ADPRHL1Q8NDY3 354 aa2.7□□□□□ -1.98
HMGB1P35-201ENST00000503360 LINS1Q8NG48 757 aa2.7□□□□□ -1.98
HMGB1P35-201ENST00000503360 STAMQ92783 540 aa2.7□□□□□ -1.98
HMGB1P35-201ENST00000503360 KCNJ9Q92806 393 aa2.7□□□□□ -1.98
HMGB1P35-201ENST00000503360 CELF1Q92879 486 aaKnown RBP2.7□□□□□ -1.98
HMGB1P35-201ENST00000503360 CUL5Q93034 780 aa2.7□□□□□ -1.98
HMGB1P35-201ENST00000503360 ZNF845Q96IR2 970 aaPredicted RBP2.7□□□□□ -1.98
HMGB1P35-201ENST00000503360 THOC3Q96J01 351 aaKnown RBP2.7□□□□□ -1.98
HMGB1P35-201ENST00000503360 TWNKQ96RR1 684 aa2.7□□□□□ -1.98
HMGB1P35-201ENST00000503360 SENP7Q9BQF6 1050 aa2.7□□□□□ -1.98
HMGB1P35-201ENST00000503360 ABHD14AQ9BUJ0 271 aa2.7□□□□□ -1.98
HMGB1P35-201ENST00000503360 HTATIP2Q9BUP3 242 aa2.7□□□□□ -1.98
HMGB1P35-201ENST00000503360 HERC2P3Q9BVR0 1158 aa2.7□□□□□ -1.98
HMGB1P35-201ENST00000503360 CLPBQ9H078 707 aa2.7□□□□□ -1.98
HMGB1P35-201ENST00000503360 OSBPL5Q9H0X9 879 aaPredicted RBP2.7□□□□□ -1.98
HMGB1P35-201ENST00000503360 SFXN1Q9H9B4 322 aa2.7□□□□□ -1.98
HMGB1P35-201ENST00000503360 IFT80Q9P2H3 777 aaPredicted RBP2.7□□□□□ -1.98
HMGB1P35-201ENST00000503360 PDP2Q9P2J9 529 aa2.7□□□□□ -1.98
HMGB1P35-201ENST00000503360 PGAP2Q9UHJ9 254 aa2.7□□□□□ -1.98
HMGB1P35-201ENST00000503360 GJD2Q9UKL4 321 aa2.7□□□□□ -1.98
HMGB1P35-201ENST00000503360 CRYL1Q9Y2S2 319 aa2.7□□□□□ -1.98
HMGB1P35-201ENST00000503360 SIRT4Q9Y6E7 314 aaPredicted RBP2.7□□□□□ -1.98
HMGB1P35-201ENST00000503360 VWA3AA6NCI4 1184 aa2.69□□□□□ -1.98
HMGB1P35-201ENST00000503360 EYA2O00167 538 aa2.69□□□□□ -1.98
HMGB1P35-201ENST00000503360 RRHO14718 337 aa2.69□□□□□ -1.98
HMGB1P35-201ENST00000503360 KLK10O43240 276 aa2.69□□□□□ -1.98
HMGB1P35-201ENST00000503360 HOXC11O43248 304 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P35-201ENST00000503360 WDHD1O75717 1129 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P35-201ENST00000503360 CNTN5O94779 1100 aa2.69□□□□□ -1.98
HMGB1P35-201ENST00000503360 RFPL3SP0C7P2 107 aa2.69□□□□□ -1.98
HMGB1P35-201ENST00000503360 T-ENOLP0DO92 83 aa2.69□□□□□ -1.98
HMGB1P35-201ENST00000503360 TGFB3P10600 412 aa2.69□□□□□ -1.98
HMGB1P35-201ENST00000503360 LYL1P12980 280 aa2.69□□□□□ -1.98
HMGB1P35-201ENST00000503360 XBP1P17861 261 aa2.69□□□□□ -1.98
HMGB1P35-201ENST00000503360 IDUAP35475 653 aa2.69□□□□□ -1.98
HMGB1P35-201ENST00000503360 PNPLA4P41247 253 aa2.69□□□□□ -1.98
HMGB1P35-201ENST00000503360 CCR5P51681 352 aa2.69□□□□□ -1.98
HMGB1P35-201ENST00000503360 IRX6P78412 446 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P35-201ENST00000503360 SETQ01105 290 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P35-201ENST00000503360 TLE2Q04725 743 aa2.69□□□□□ -1.98
HMGB1P35-201ENST00000503360 DMWDQ09019 674 aa2.69□□□□□ -1.98
HMGB1P35-201ENST00000503360 TRPC3Q13507 836 aa2.69□□□□□ -1.98
HMGB1P35-201ENST00000503360 ALKBH1Q13686 389 aaKnown RBP2.69□□□□□ -1.98
HMGB1P35-201ENST00000503360 SEC23BQ15437 767 aa2.69□□□□□ -1.98
HMGB1P35-201ENST00000503360 ANXA2RQ3ZCQ2 193 aa2.69□□□□□ -1.98
HMGB1P35-201ENST00000503360 GLE1Q53GS7 698 aaKnown RBP2.69□□□□□ -1.98
HMGB1P35-201ENST00000503360 CBWD5Q5RIA9 395 aa2.69□□□□□ -1.98
HMGB1P35-201ENST00000503360 MAP3K21Q5TCX8 1036 aa2.69□□□□□ -1.98
HMGB1P35-201ENST00000503360 JAKMIP3Q5VZ66 844 aa2.69□□□□□ -1.98
HMGB1P35-201ENST00000503360 DHRS13Q6UX07 377 aa2.69□□□□□ -1.98
HMGB1P35-201ENST00000503360 TFAP2DQ7Z6R9 452 aa2.69□□□□□ -1.98
HMGB1P35-201ENST00000503360 RFX6Q8HWS3 928 aa2.69□□□□□ -1.98
HMGB1P35-201ENST00000503360 TMTC1Q8IUR5 882 aa2.69□□□□□ -1.98
HMGB1P35-201ENST00000503360 ADGRF3Q8IZF5 1079 aa2.69□□□□□ -1.98
HMGB1P35-201ENST00000503360 ESX1Q8N693 406 aa2.69□□□□□ -1.98
HMGB1P35-201ENST00000503360 ENDOVQ8N8Q3 282 aaKnown RBP2.69□□□□□ -1.98
HMGB1P35-201ENST00000503360 USP38Q8NB14 1042 aa2.69□□□□□ -1.98
HMGB1P35-201ENST00000503360 IL17REQ8NFR9 667 aa2.69□□□□□ -1.98
HMGB1P35-201ENST00000503360 GADD45GIP1Q8TAE8 222 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P35-201ENST00000503360 ZNF398Q8TD17 642 aa2.69□□□□□ -1.98
HMGB1P35-201ENST00000503360 HVCN1Q96D96 273 aa2.69□□□□□ -1.98
HMGB1P35-201ENST00000503360 NPAS1Q99742 590 aa2.69□□□□□ -1.98
HMGB1P35-201ENST00000503360 REEP2Q9BRK0 252 aa2.69□□□□□ -1.98
HMGB1P35-201ENST00000503360 EFHD1Q9BUP0 239 aa2.69□□□□□ -1.98
HMGB1P35-201ENST00000503360 HDHD5Q9BXW7 423 aa2.69□□□□□ -1.98
HMGB1P35-201ENST00000503360 TLR8Q9NR97 1041 aaKnown RBP2.69□□□□□ -1.98
HMGB1P35-201ENST00000503360 PDGFCQ9NRA1 345 aa2.69□□□□□ -1.98
HMGB1P35-201ENST00000503360 MTPAPQ9NVV4 582 aaKnown RBP eCLIP2.69□□□□□ -1.98
HMGB1P35-201ENST00000503360 THAP1Q9NVV9 213 aa2.69□□□□□ -1.98
HMGB1P35-201ENST00000503360 TMEM160Q9NX00 188 aa2.69□□□□□ -1.98
HMGB1P35-201ENST00000503360 SELENONQ9NZV5 590 aa2.69□□□□□ -1.98
HMGB1P35-201ENST00000503360 MDFICQ9P1T7 246 aa2.69□□□□□ -1.98
HMGB1P35-201ENST00000503360 PI4KBQ9UBF8 816 aa2.69□□□□□ -1.98
HMGB1P35-201ENST00000503360 SLC25A13Q9UJS0 675 aa2.69□□□□□ -1.98
HMGB1P35-201ENST00000503360 PNMA2Q9UL42 364 aa2.69□□□□□ -1.98
HMGB1P35-201ENST00000503360 MAFFQ9ULX9 164 aa2.69□□□□□ -1.98
HMGB1P35-201ENST00000503360 SPATA31A5Q5VU36 1347 aa2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 SPATA31A7Q8IWB4 1347 aa2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP2.68□□□□□ -1.98
HMGB1P35-201ENST00000503360 A0A1B0GVC2 190 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms