RNA–Protein interactions for RNA: ENST00000502404.5

UBE2D3-211, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-211ENST00000502404 DMXL2Q8TDJ6 3036 aa11.5□□□□□ -0.57
UBE2D3-211ENST00000502404 A0A1B0GTQ1 180 aa11.5□□□□□ -0.57
UBE2D3-211ENST00000502404 TRIM49BA6NDI0 452 aa11.5□□□□□ -0.57
UBE2D3-211ENST00000502404 MID1O15344 667 aa11.5□□□□□ -0.57
UBE2D3-211ENST00000502404 MAGEC1O60732 1142 aa11.5□□□□□ -0.57
UBE2D3-211ENST00000502404 SIN3BO75182 1162 aa11.5□□□□□ -0.57
UBE2D3-211ENST00000502404 RNASEH2AO75792 299 aaKnown RBP11.5□□□□□ -0.57
UBE2D3-211ENST00000502404 LUC7L3O95232 432 aaKnown RBP11.5□□□□□ -0.57
UBE2D3-211ENST00000502404 ITGAVP06756 1048 aa11.5□□□□□ -0.57
UBE2D3-211ENST00000502404 C1SP09871 688 aa11.5□□□□□ -0.57
UBE2D3-211ENST00000502404 KRT5P13647 590 aa11.5□□□□□ -0.57
UBE2D3-211ENST00000502404 GOT1P17174 413 aa11.5□□□□□ -0.57
UBE2D3-211ENST00000502404 ABCB4P21439 1286 aa11.5□□□□□ -0.57
UBE2D3-211ENST00000502404 C5AR1P21730 350 aa11.5□□□□□ -0.57
UBE2D3-211ENST00000502404 NUDT1P36639 197 aa11.5□□□□□ -0.57
UBE2D3-211ENST00000502404 ARRB1P49407 418 aaPredicted RBP11.5□□□□□ -0.57
UBE2D3-211ENST00000502404 CCR5P51681 352 aa11.5□□□□□ -0.57
UBE2D3-211ENST00000502404 SNX16P57768 344 aa11.5□□□□□ -0.57
UBE2D3-211ENST00000502404 RPS24P62847 133 aaKnown RBP11.5□□□□□ -0.57
UBE2D3-211ENST00000502404 MEA1Q16626 185 aa11.5□□□□□ -0.57
UBE2D3-211ENST00000502404 CCDC157Q569K6 752 aa11.5□□□□□ -0.57
UBE2D3-211ENST00000502404 DCAF6Q58WW2 860 aa11.5□□□□□ -0.57
UBE2D3-211ENST00000502404 PITRM1Q5JRX3 1037 aa11.5□□□□□ -0.57
UBE2D3-211ENST00000502404 C9orf64Q5T6V5 341 aa11.5□□□□□ -0.57
UBE2D3-211ENST00000502404 TTC39BQ5VTQ0 682 aaPredicted RBP11.5□□□□□ -0.57
UBE2D3-211ENST00000502404 NCEH1Q6PIU2 408 aa11.5□□□□□ -0.57
UBE2D3-211ENST00000502404 C19orf48Q6RUI8 117 aa11.5□□□□□ -0.57
UBE2D3-211ENST00000502404 RRAGAQ7L523 313 aa11.5□□□□□ -0.57
UBE2D3-211ENST00000502404 ENOSF1Q7L5Y1 443 aa11.5□□□□□ -0.57
UBE2D3-211ENST00000502404 DSG4Q86SJ6 1040 aa11.5□□□□□ -0.57
UBE2D3-211ENST00000502404 TMPRSS12Q86WS5 348 aa11.5□□□□□ -0.57
UBE2D3-211ENST00000502404 LGI2Q8N0V4 545 aa11.5□□□□□ -0.57
UBE2D3-211ENST00000502404 OXR1Q8N573 874 aa11.5□□□□□ -0.57
UBE2D3-211ENST00000502404 ATP6V0D2Q8N8Y2 350 aa11.5□□□□□ -0.57
UBE2D3-211ENST00000502404 WFDC5Q8TCV5 224 aa11.5□□□□□ -0.57
UBE2D3-211ENST00000502404 DQX1Q8TE96 717 aaKnown RBP11.5□□□□□ -0.57
UBE2D3-211ENST00000502404 SLC39A13Q96H72 371 aa11.5□□□□□ -0.57
UBE2D3-211ENST00000502404 LMLNQ96KR4 655 aa11.5□□□□□ -0.57
UBE2D3-211ENST00000502404 FCRL2Q96LA5 508 aaPredicted RBP11.5□□□□□ -0.57
UBE2D3-211ENST00000502404 ELF4Q99607 663 aaPredicted RBP11.5□□□□□ -0.57
UBE2D3-211ENST00000502404 NEUROG2Q9H2A3 272 aa11.5□□□□□ -0.57
UBE2D3-211ENST00000502404 GDF3Q9NR23 364 aa11.5□□□□□ -0.57
UBE2D3-211ENST00000502404 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.5□□□□□ -0.57
UBE2D3-211ENST00000502404 ADAMTS1Q9UHI8 967 aa11.5□□□□□ -0.57
UBE2D3-211ENST00000502404 PCDHGA1Q9Y5H4 931 aa11.5□□□□□ -0.57
UBE2D3-211ENST00000502404 ACACAQ13085 2346 aa11.5□□□□□ -0.57
UBE2D3-211ENST00000502404 ZFHX4Q86UP3 3567 aa11.5□□□□□ -0.57
UBE2D3-211ENST00000502404 A0A1W2PP55 124 aa11.49□□□□□ -0.57
UBE2D3-211ENST00000502404 TRABD2BA6NFA1 517 aa11.49□□□□□ -0.57
UBE2D3-211ENST00000502404 EIF4E1BA6NMX2 242 aaKnown RBP11.49□□□□□ -0.57
UBE2D3-211ENST00000502404 F5H5T6 163 aa11.49□□□□□ -0.57
UBE2D3-211ENST00000502404 RNF225M0QZC1 329 aaPredicted RBP11.49□□□□□ -0.57
UBE2D3-211ENST00000502404 KCNK3O14649 394 aa11.49□□□□□ -0.57
UBE2D3-211ENST00000502404 LDOC1O95751 146 aaPredicted RBP11.49□□□□□ -0.57
UBE2D3-211ENST00000502404 MOCS2O96007 188 aaPredicted RBP11.49□□□□□ -0.57
UBE2D3-211ENST00000502404 IGHV4-34P06331 123 aa11.49□□□□□ -0.57
UBE2D3-211ENST00000502404 CD38P28907 300 aa11.49□□□□□ -0.57
UBE2D3-211ENST00000502404 HNF1BP35680 557 aa11.49□□□□□ -0.57
UBE2D3-211ENST00000502404 GPD2P43304 727 aa11.49□□□□□ -0.57
UBE2D3-211ENST00000502404 YWHAZP63104 245 aaKnown RBP11.49□□□□□ -0.57
UBE2D3-211ENST00000502404 CDK17Q00537 523 aa11.49□□□□□ -0.57
UBE2D3-211ENST00000502404 ELAVL3Q14576 367 aaKnown RBP11.49□□□□□ -0.57
UBE2D3-211ENST00000502404 SMAD1Q15797 465 aaKnown RBP11.49□□□□□ -0.57
UBE2D3-211ENST00000502404 RABGAP1LQ5R372 815 aa11.49□□□□□ -0.57
UBE2D3-211ENST00000502404 FAM46CQ5VWP2 391 aa11.49□□□□□ -0.57
UBE2D3-211ENST00000502404 NADSYN1Q6IA69 706 aa11.49□□□□□ -0.57
UBE2D3-211ENST00000502404 KLHL10Q6JEL2 608 aa11.49□□□□□ -0.57
UBE2D3-211ENST00000502404 PRPF39Q86UA1 669 aaKnown RBP11.49□□□□□ -0.57
UBE2D3-211ENST00000502404 PDZD3Q86UT5 571 aa11.49□□□□□ -0.57
UBE2D3-211ENST00000502404 CHSY1Q86X52 802 aa11.49□□□□□ -0.57
UBE2D3-211ENST00000502404 MMAAQ8IVH4 418 aaKnown RBP11.49□□□□□ -0.57
UBE2D3-211ENST00000502404 CFAP52Q8N1V2 620 aa11.49□□□□□ -0.57
UBE2D3-211ENST00000502404 OR14C36Q8NHC7 312 aa11.49□□□□□ -0.57
UBE2D3-211ENST00000502404 MDM1Q8TC05 714 aa11.49□□□□□ -0.57
UBE2D3-211ENST00000502404 CLEC4CQ8WTT0 213 aa11.49□□□□□ -0.57
UBE2D3-211ENST00000502404 MRGPRX3Q96LB0 322 aa11.49□□□□□ -0.57
UBE2D3-211ENST00000502404 PRICKLE1Q96MT3 831 aaPredicted RBP11.49□□□□□ -0.57
UBE2D3-211ENST00000502404 NUCKS1Q9H1E3 243 aaKnown RBP11.49□□□□□ -0.57
UBE2D3-211ENST00000502404 THAP9Q9H5L6 903 aa11.49□□□□□ -0.57
UBE2D3-211ENST00000502404 POPDC2Q9HBU9 364 aa11.49□□□□□ -0.57
UBE2D3-211ENST00000502404 NAALADL1Q9UQQ1 740 aa11.49□□□□□ -0.57
UBE2D3-211ENST00000502404 BTBD3Q9Y2F9 522 aa11.49□□□□□ -0.57
UBE2D3-211ENST00000502404 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.49□□□□□ -0.57
UBE2D3-211ENST00000502404 KNTC1P50748 2209 aa11.48□□□□□ -0.57
UBE2D3-211ENST00000502404 TBC1D3DA0A087WVF3 549 aa11.48□□□□□ -0.57
UBE2D3-211ENST00000502404 TBC1D3IA0A087WXS9 549 aa11.48□□□□□ -0.57
UBE2D3-211ENST00000502404 TBC1D3EA0A087X179 549 aa11.48□□□□□ -0.57
UBE2D3-211ENST00000502404 TBC1D3KA0A087X1G2 549 aa11.48□□□□□ -0.57
UBE2D3-211ENST00000502404 TBC1D3FA6NER0 549 aaPredicted RBP11.48□□□□□ -0.57
UBE2D3-211ENST00000502404 TTC34A8MYJ7 566 aa11.48□□□□□ -0.57
UBE2D3-211ENST00000502404 TBC1D3LB9A6J9 549 aa11.48□□□□□ -0.57
UBE2D3-211ENST00000502404 ENC1O14682 589 aa11.48□□□□□ -0.57
UBE2D3-211ENST00000502404 SLC7A4O43246 635 aa11.48□□□□□ -0.57
UBE2D3-211ENST00000502404 IL1BP01584 269 aa11.48□□□□□ -0.57
UBE2D3-211ENST00000502404 AFPP02771 609 aaKnown RBP11.48□□□□□ -0.57
UBE2D3-211ENST00000502404 FYNP06241 537 aa11.48□□□□□ -0.57
UBE2D3-211ENST00000502404 GLI1P08151 1106 aa11.48□□□□□ -0.57
UBE2D3-211ENST00000502404 TBC1D3HP0C7X1 549 aa11.48□□□□□ -0.57
UBE2D3-211ENST00000502404 JUPP14923 745 aa11.48□□□□□ -0.57
UBE2D3-211ENST00000502404 TACR2P21452 398 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms