RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 GHDCQ8N2G8 530 aa3.96□□□□□ -1.78
CALD1-224ENST00000498254 C17orf53Q8N3J3 647 aaPredicted RBP3.96□□□□□ -1.78
CALD1-224ENST00000498254 SRBD1Q8N5C6 995 aaKnown RBP3.96□□□□□ -1.78
CALD1-224ENST00000498254 ACTRT2Q8TDY3 377 aa3.96□□□□□ -1.78
CALD1-224ENST00000498254 RAB40AQ8WXH6 277 aa3.96□□□□□ -1.78
CALD1-224ENST00000498254 USP6NLQ92738 828 aa3.96□□□□□ -1.78
CALD1-224ENST00000498254 SH3KBP1Q96B97 665 aa3.96□□□□□ -1.78
CALD1-224ENST00000498254 KLHL29Q96CT2 875 aa3.96□□□□□ -1.78
CALD1-224ENST00000498254 ADAD1Q96M93 576 aaKnown RBP3.96□□□□□ -1.78
CALD1-224ENST00000498254 NR1H4Q96RI1 486 aaPredicted RBP3.96□□□□□ -1.78
CALD1-224ENST00000498254 NPLQ9BXD5 320 aaPredicted RBP3.96□□□□□ -1.78
CALD1-224ENST00000498254 SFXN1Q9H9B4 322 aa3.96□□□□□ -1.78
CALD1-224ENST00000498254 SERTAD4Q9NUC0 356 aa3.96□□□□□ -1.78
CALD1-224ENST00000498254 SMPD4Q9NXE4 827 aa3.96□□□□□ -1.78
CALD1-224ENST00000498254 IL1RAPL1Q9NZN1 696 aa3.96□□□□□ -1.78
CALD1-224ENST00000498254 LRIT1Q9P2V4 623 aa3.96□□□□□ -1.78
CALD1-224ENST00000498254 UPB1Q9UBR1 384 aa3.96□□□□□ -1.78
CALD1-224ENST00000498254 CTNNAL1Q9UBT7 734 aa3.96□□□□□ -1.78
CALD1-224ENST00000498254 OSGIN2Q9Y236 505 aa3.96□□□□□ -1.78
CALD1-224ENST00000498254 FNDC1Q4ZHG4 1894 aaPredicted RBP3.96□□□□□ -1.78
CALD1-224ENST00000498254 KDM3AQ9Y4C1 1321 aa3.95□□□□□ -1.78
CALD1-224ENST00000498254 TCRBV7S3A2A0A539 114 aa3.95□□□□□ -1.78
CALD1-224ENST00000498254 GAGE10A6NGK3 116 aa3.95□□□□□ -1.78
CALD1-224ENST00000498254 TSPY2A6NKD2 308 aa3.95□□□□□ -1.78
CALD1-224ENST00000498254 C16orf96A6NNT2 1141 aa3.95□□□□□ -1.78
CALD1-224ENST00000498254 C17orf100A8MU93 164 aa3.95□□□□□ -1.78
CALD1-224ENST00000498254 TEX22C9J3V5 150 aa3.95□□□□□ -1.78
CALD1-224ENST00000498254 P4HA2O15460 535 aa3.95□□□□□ -1.78
CALD1-224ENST00000498254 HBP1O60381 514 aa3.95□□□□□ -1.78
CALD1-224ENST00000498254 HNRNPCL1O60812 293 aaKnown RBP3.95□□□□□ -1.78
CALD1-224ENST00000498254 TACC1O75410 805 aa3.95□□□□□ -1.78
CALD1-224ENST00000498254 GCATO75600 419 aa3.95□□□□□ -1.78
CALD1-224ENST00000498254 ADH4P08319 380 aa3.95□□□□□ -1.78
CALD1-224ENST00000498254 TSPY3P0CV98 308 aa3.95□□□□□ -1.78
CALD1-224ENST00000498254 TSPY8P0CW00 308 aa3.95□□□□□ -1.78
CALD1-224ENST00000498254 LAMP2P13473 410 aa3.95□□□□□ -1.78
CALD1-224ENST00000498254 COX7A2P14406 83 aa3.95□□□□□ -1.78
CALD1-224ENST00000498254 PORP16435 677 aaPredicted RBP3.95□□□□□ -1.78
CALD1-224ENST00000498254 IGFBP2P18065 325 aa3.95□□□□□ -1.78
CALD1-224ENST00000498254 PPARGP37231 505 aaPredicted RBP3.95□□□□□ -1.78
CALD1-224ENST00000498254 PLA2G5P39877 138 aa3.95□□□□□ -1.78
CALD1-224ENST00000498254 GRIA3P42263 894 aa3.95□□□□□ -1.78
CALD1-224ENST00000498254 NLRP5P59047 1200 aa3.95□□□□□ -1.78
CALD1-224ENST00000498254 MRPS35P82673 323 aaKnown RBP3.95□□□□□ -1.78
CALD1-224ENST00000498254 TSPY1Q01534 308 aa3.95□□□□□ -1.78
CALD1-224ENST00000498254 CREB5Q02930 508 aa3.95□□□□□ -1.78
CALD1-224ENST00000498254 EFEMP1Q12805 493 aa3.95□□□□□ -1.78
CALD1-224ENST00000498254 TMEM115Q12893 351 aaPredicted RBP3.95□□□□□ -1.78
CALD1-224ENST00000498254 SLC14A1Q13336 389 aa3.95□□□□□ -1.78
CALD1-224ENST00000498254 SLC18A3Q16572 532 aa3.95□□□□□ -1.78
CALD1-224ENST00000498254 SPATS1Q496A3 300 aa3.95□□□□□ -1.78
CALD1-224ENST00000498254 LY6G5CQ5SRR4 150 aa3.95□□□□□ -1.78
CALD1-224ENST00000498254 CC2D1BQ5T0F9 858 aaKnown RBP3.95□□□□□ -1.78
CALD1-224ENST00000498254 INO80CQ6PI98 192 aaPredicted RBP3.95□□□□□ -1.78
CALD1-224ENST00000498254 SERPINA13PQ6UXR4 307 aa3.95□□□□□ -1.78
CALD1-224ENST00000498254 RNF207Q6ZRF8 634 aa3.95□□□□□ -1.78
CALD1-224ENST00000498254 DCDC5Q6ZRR9 648 aa3.95□□□□□ -1.78
CALD1-224ENST00000498254 RRM2BQ7LG56 351 aa3.95□□□□□ -1.78
CALD1-224ENST00000498254 SZRD1Q7Z422 152 aa3.95□□□□□ -1.78
CALD1-224ENST00000498254 BCDIN3DQ7Z5W3 292 aaKnown RBP3.95□□□□□ -1.78
CALD1-224ENST00000498254 GALNT7Q86SF2 657 aa3.95□□□□□ -1.78
CALD1-224ENST00000498254 RASAL3Q86YV0 1011 aa3.95□□□□□ -1.78
CALD1-224ENST00000498254 LSMEM1Q8N8F7 131 aa3.95□□□□□ -1.78
CALD1-224ENST00000498254 TERB1Q8NA31 727 aa3.95□□□□□ -1.78
CALD1-224ENST00000498254 ADPRHL1Q8NDY3 354 aa3.95□□□□□ -1.78
CALD1-224ENST00000498254 FAM110DQ8TAY7 271 aaPredicted RBP3.95□□□□□ -1.78
CALD1-224ENST00000498254 CACTINQ8WUQ7 758 aaKnown RBP3.95□□□□□ -1.78
CALD1-224ENST00000498254 SNRNP27Q8WVK2 155 aaKnown RBP3.95□□□□□ -1.78
CALD1-224ENST00000498254 NCSTNQ92542 709 aa3.95□□□□□ -1.78
CALD1-224ENST00000498254 IP6K1Q92551 441 aa3.95□□□□□ -1.78
CALD1-224ENST00000498254 TBC1D5Q92609 795 aa3.95□□□□□ -1.78
CALD1-224ENST00000498254 CAVIN3Q969G5 261 aa3.95□□□□□ -1.78
CALD1-224ENST00000498254 SAAL1Q96ER3 474 aa3.95□□□□□ -1.78
CALD1-224ENST00000498254 CALML4Q96GE6 196 aa3.95□□□□□ -1.78
CALD1-224ENST00000498254 C5orf34Q96MH7 638 aa3.95□□□□□ -1.78
CALD1-224ENST00000498254 NPAS1Q99742 590 aa3.95□□□□□ -1.78
CALD1-224ENST00000498254 TRIM2Q9C040 744 aa3.95□□□□□ -1.78
CALD1-224ENST00000498254 SYNCQ9H7C4 482 aa3.95□□□□□ -1.78
CALD1-224ENST00000498254 ZNF703Q9H7S9 590 aaPredicted RBP3.95□□□□□ -1.78
CALD1-224ENST00000498254 SLC22A11Q9NSA0 550 aa3.95□□□□□ -1.78
CALD1-224ENST00000498254 ARL8BQ9NVJ2 186 aa3.95□□□□□ -1.78
CALD1-224ENST00000498254 PPP1R14DQ9NXH3 145 aa3.95□□□□□ -1.78
CALD1-224ENST00000498254 ASIC5Q9NY37 505 aa3.95□□□□□ -1.78
CALD1-224ENST00000498254 TFCP2L1Q9NZI6 479 aa3.95□□□□□ -1.78
CALD1-224ENST00000498254 HCN3Q9P1Z3 774 aa3.95□□□□□ -1.78
CALD1-224ENST00000498254 BCCIPQ9P287 314 aaKnown RBP eCLIP3.95□□□□□ -1.78
CALD1-224ENST00000498254 LIMA1Q9UHB6 759 aaKnown RBP3.95□□□□□ -1.78
CALD1-224ENST00000498254 RPS6KA6Q9UK32 745 aa3.95□□□□□ -1.78
CALD1-224ENST00000498254 MKLN1Q9UL63 735 aa3.95□□□□□ -1.78
CALD1-224ENST00000498254 PKP3Q9Y446 797 aa3.95□□□□□ -1.78
CALD1-224ENST00000498254 TTLL3Q9Y4R7 772 aa3.95□□□□□ -1.78
CALD1-224ENST00000498254 KCNE2Q9Y6J6 123 aa3.95□□□□□ -1.78
CALD1-224ENST00000498254 SALL3Q9BXA9 1300 aa3.95□□□□□ -1.78
CALD1-224ENST00000498254 FAM237BA0A1B0GVD1 139 aa3.94□□□□□ -1.78
CALD1-224ENST00000498254 PABPN1LA6NDY0 278 aaKnown RBP3.94□□□□□ -1.78
CALD1-224ENST00000498254 TMEM232C9JQI7 657 aa3.94□□□□□ -1.78
CALD1-224ENST00000498254 IFNL4K9M1U5 179 aa3.94□□□□□ -1.78
CALD1-224ENST00000498254 VILLO15195 856 aa3.94□□□□□ -1.78
CALD1-224ENST00000498254 STRNO43815 780 aa3.94□□□□□ -1.78
CALD1-224ENST00000498254 TJP3O95049 919 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms