RNA–Protein interactions for RNA: ENST00000498136.5

ABCF3-218, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-218ENST00000498136 MRPL47Q9HD33 250 aaKnown RBP17.15■□□□□ 0.34
ABCF3-218ENST00000498136 ITM2CQ9NQX7 267 aa17.15■□□□□ 0.34
ABCF3-218ENST00000498136 ZNHIT6Q9NWK9 470 aaKnown RBP17.15■□□□□ 0.34
ABCF3-218ENST00000498136 USP36Q9P275 1121 aaKnown RBP17.15■□□□□ 0.34
ABCF3-218ENST00000498136 PPARGC1AQ9UBK2 798 aaKnown RBP17.15■□□□□ 0.34
ABCF3-218ENST00000498136 CFAP54Q96N23 3096 aa17.15■□□□□ 0.34
ABCF3-218ENST00000498136 WDR87Q6ZQQ6 2873 aa17.14■□□□□ 0.34
ABCF3-218ENST00000498136 A0A0D9SEW6 157 aa17.14■□□□□ 0.33
ABCF3-218ENST00000498136 TARSL2A2RTX5 802 aaKnown RBP17.14■□□□□ 0.33
ABCF3-218ENST00000498136 FAM72CH0Y354 149 aa17.14■□□□□ 0.33
ABCF3-218ENST00000498136 RNF8O76064 485 aa17.14■□□□□ 0.33
ABCF3-218ENST00000498136 TGM1P22735 817 aa17.14■□□□□ 0.33
ABCF3-218ENST00000498136 OXTRP30559 389 aa17.14■□□□□ 0.33
ABCF3-218ENST00000498136 PTGER3P43115 390 aa17.14■□□□□ 0.33
ABCF3-218ENST00000498136 RPS14P62263 151 aaKnown RBP17.14■□□□□ 0.33
ABCF3-218ENST00000498136 NRG1Q02297 640 aaPredicted RBP17.14■□□□□ 0.33
ABCF3-218ENST00000498136 LMNB2Q03252 620 aa17.14■□□□□ 0.33
ABCF3-218ENST00000498136 TTC31Q49AM3 519 aaPredicted RBP17.14■□□□□ 0.33
ABCF3-218ENST00000498136 SPDYCQ5MJ68 293 aa17.14■□□□□ 0.33
ABCF3-218ENST00000498136 CCDC122Q5T0U0 273 aa17.14■□□□□ 0.33
ABCF3-218ENST00000498136 FAM72AQ5TYM5 149 aa17.14■□□□□ 0.33
ABCF3-218ENST00000498136 FAM72DQ6L9T8 149 aa17.14■□□□□ 0.33
ABCF3-218ENST00000498136 FAM72BQ86X60 149 aa17.14■□□□□ 0.33
ABCF3-218ENST00000498136 PYROXD2Q8N2H3 581 aa17.14■□□□□ 0.33
ABCF3-218ENST00000498136 OR7D4Q8NG98 312 aa17.14■□□□□ 0.33
ABCF3-218ENST00000498136 GANCQ8TET4 914 aa17.14■□□□□ 0.33
ABCF3-218ENST00000498136 TOE1Q96GM8 510 aaKnown RBP17.14■□□□□ 0.33
ABCF3-218ENST00000498136 SPON2Q9BUD6 331 aa17.14■□□□□ 0.33
ABCF3-218ENST00000498136 TRIM5Q9C035 493 aa17.14■□□□□ 0.33
ABCF3-218ENST00000498136 VPS45Q9NRW7 570 aa17.14■□□□□ 0.33
ABCF3-218ENST00000498136 ARHGAP20Q9P2F6 1191 aa17.14■□□□□ 0.33
ABCF3-218ENST00000498136 FZD10Q9ULW2 581 aa17.14■□□□□ 0.33
ABCF3-218ENST00000498136 OR51B4Q9Y5P0 310 aa17.14■□□□□ 0.33
ABCF3-218ENST00000498136 ATXN2Q99700 1313 aaKnown RBP17.14■□□□□ 0.33
ABCF3-218ENST00000498136 TNRC6BQ9UPQ9 1833 aaKnown RBP17.14■□□□□ 0.33
ABCF3-218ENST00000498136 A0A087X0T9 212 aa17.13■□□□□ 0.33
ABCF3-218ENST00000498136 ILVBLA1L0T0 632 aa17.13■□□□□ 0.33
ABCF3-218ENST00000498136 TMEM191CA6NGB0 347 aa17.13■□□□□ 0.33
ABCF3-218ENST00000498136 CREB3O43889 395 aa17.13■□□□□ 0.33
ABCF3-218ENST00000498136 BNIP3LO60238 219 aa17.13■□□□□ 0.33
ABCF3-218ENST00000498136 FOXD2O60548 495 aaPredicted RBP17.13■□□□□ 0.33
ABCF3-218ENST00000498136 SNAP91O60641 907 aa17.13■□□□□ 0.33
ABCF3-218ENST00000498136 LRIG2O94898 1065 aa17.13■□□□□ 0.33
ABCF3-218ENST00000498136 ZNF806P0C7X5 589 aa17.13■□□□□ 0.33
ABCF3-218ENST00000498136 FAM228BP0C875 321 aa17.13■□□□□ 0.33
ABCF3-218ENST00000498136 ZNF33AQ06730 810 aa17.13■□□□□ 0.33
ABCF3-218ENST00000498136 SCAPQ12770 1279 aa17.13■□□□□ 0.33
ABCF3-218ENST00000498136 ARID5BQ14865 1188 aa17.13■□□□□ 0.33
ABCF3-218ENST00000498136 C9orf64Q5T6V5 341 aa17.13■□□□□ 0.33
ABCF3-218ENST00000498136 ALKBH5Q6P6C2 394 aaKnown RBP17.13■□□□□ 0.33
ABCF3-218ENST00000498136 MMAAQ8IVH4 418 aaKnown RBP17.13■□□□□ 0.33
ABCF3-218ENST00000498136 RGL4Q8IZJ4 473 aa17.13■□□□□ 0.33
ABCF3-218ENST00000498136 STK40Q8N2I9 435 aa17.13■□□□□ 0.33
ABCF3-218ENST00000498136 ATP11CQ8NB49 1132 aa17.13■□□□□ 0.33
ABCF3-218ENST00000498136 OR8K1Q8NGG5 319 aa17.13■□□□□ 0.33
ABCF3-218ENST00000498136 PTPRN2Q92932 1015 aa17.13■□□□□ 0.33
ABCF3-218ENST00000498136 HSPA12BQ96MM6 686 aa17.13■□□□□ 0.33
ABCF3-218ENST00000498136 EPAS1Q99814 870 aa17.13■□□□□ 0.33
ABCF3-218ENST00000498136 GPR174Q9BXC1 333 aa17.13■□□□□ 0.33
ABCF3-218ENST00000498136 TRIM7Q9C029 511 aa17.13■□□□□ 0.33
ABCF3-218ENST00000498136 DEF6Q9H4E7 631 aa17.13■□□□□ 0.33
ABCF3-218ENST00000498136 WSB2Q9NYS7 404 aaPredicted RBP17.13■□□□□ 0.33
ABCF3-218ENST00000498136 PCSK1NQ9UHG2 260 aa17.13■□□□□ 0.33
ABCF3-218ENST00000498136 DNAI1Q9UI46 699 aa17.13■□□□□ 0.33
ABCF3-218ENST00000498136 VPS51Q9UID3 782 aa17.13■□□□□ 0.33
ABCF3-218ENST00000498136 GVINP1Q7Z2Y8 2422 aa17.12■□□□□ 0.33
ABCF3-218ENST00000498136 ZNF292O60281 2723 aa17.12■□□□□ 0.33
ABCF3-218ENST00000498136 MEI4A8MW99 385 aa17.12■□□□□ 0.33
ABCF3-218ENST00000498136 CBX4O00257 560 aa17.12■□□□□ 0.33
ABCF3-218ENST00000498136 VAV1P15498 845 aa17.12■□□□□ 0.33
ABCF3-218ENST00000498136 RHOQP17081 205 aa17.12■□□□□ 0.33
ABCF3-218ENST00000498136 ITPKAP23677 461 aa17.12■□□□□ 0.33
ABCF3-218ENST00000498136 EPHB2P29323 1055 aa17.12■□□□□ 0.33
ABCF3-218ENST00000498136 EIF4A3P38919 411 aaKnown RBP17.12■□□□□ 0.33
ABCF3-218ENST00000498136 AIF1P55008 147 aa17.12■□□□□ 0.33
ABCF3-218ENST00000498136 GNA12Q03113 381 aa17.12■□□□□ 0.33
ABCF3-218ENST00000498136 ZBTB16Q05516 673 aa17.12■□□□□ 0.33
ABCF3-218ENST00000498136 DLG2Q15700 870 aa17.12■□□□□ 0.33
ABCF3-218ENST00000498136 PLA2G2CQ5R387 149 aa17.12■□□□□ 0.33
ABCF3-218ENST00000498136 MANEALQ5VSG8 457 aa17.12■□□□□ 0.33
ABCF3-218ENST00000498136 IL31Q6EBC2 164 aa17.12■□□□□ 0.33
ABCF3-218ENST00000498136 ZNF783Q6ZMS7 281 aa17.12■□□□□ 0.33
ABCF3-218ENST00000498136 ZNF354CQ86Y25 554 aa17.12■□□□□ 0.33
ABCF3-218ENST00000498136 SH2D3CQ8N5H7 860 aa17.12■□□□□ 0.33
ABCF3-218ENST00000498136 DCAF4L2Q8NA75 395 aa17.12■□□□□ 0.33
ABCF3-218ENST00000498136 FOXJ1Q92949 421 aa17.12■□□□□ 0.33
ABCF3-218ENST00000498136 PSMB7Q99436 277 aa17.12■□□□□ 0.33
ABCF3-218ENST00000498136 THAP2Q9H0W7 228 aa17.12■□□□□ 0.33
ABCF3-218ENST00000498136 RSPH9Q9H1X1 276 aaPredicted RBP17.12■□□□□ 0.33
ABCF3-218ENST00000498136 ATP13A1Q9HD20 1204 aa17.12■□□□□ 0.33
ABCF3-218ENST00000498136 NCKAP1Q9Y2A7 1128 aa17.12■□□□□ 0.33
ABCF3-218ENST00000498136 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.11■□□□□ 0.33
ABCF3-218ENST00000498136 PRR5-ARHGAP8B1AHC4 643 aa17.11■□□□□ 0.33
ABCF3-218ENST00000498136 PRPSAP2O60256 369 aa17.11■□□□□ 0.33
ABCF3-218ENST00000498136 IL1BP01584 269 aa17.11■□□□□ 0.33
ABCF3-218ENST00000498136 HNRNPH3P31942 346 aaKnown RBP17.11■□□□□ 0.33
ABCF3-218ENST00000498136 L1CAMP32004 1257 aa17.11■□□□□ 0.33
ABCF3-218ENST00000498136 DPP6P42658 865 aa17.11■□□□□ 0.33
ABCF3-218ENST00000498136 ID4P47928 161 aa17.11■□□□□ 0.33
ABCF3-218ENST00000498136 PSMD8P48556 350 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms