RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 OR8K1Q8NGG5 319 aa15.77■□□□□ 0.12
NUP50-219ENST00000497960 GANCQ8TET4 914 aa15.77■□□□□ 0.12
NUP50-219ENST00000497960 RPL10LQ96L21 214 aaKnown RBP15.77■□□□□ 0.12
NUP50-219ENST00000497960 HAPLN3Q96S86 360 aa15.77■□□□□ 0.12
NUP50-219ENST00000497960 PCED1AQ9H1Q7 454 aa15.77■□□□□ 0.12
NUP50-219ENST00000497960 RSPH9Q9H1X1 276 aaPredicted RBP15.77■□□□□ 0.12
NUP50-219ENST00000497960 SLCO3A1Q9UIG8 710 aa15.77■□□□□ 0.12
NUP50-219ENST00000497960 VPS28Q9UK41 221 aa15.77■□□□□ 0.12
NUP50-219ENST00000497960 SCML1Q9UN30 329 aa15.77■□□□□ 0.12
NUP50-219ENST00000497960 NCKAP1Q9Y2A7 1128 aa15.77■□□□□ 0.12
NUP50-219ENST00000497960 BZW2Q9Y6E2 419 aaKnown RBP15.77■□□□□ 0.12
NUP50-219ENST00000497960 CEP192Q8TEP8 1941 aa15.76■□□□□ 0.11
NUP50-219ENST00000497960 METTL12A8MUP2 240 aa15.76■□□□□ 0.11
NUP50-219ENST00000497960 TTC34A8MYJ7 566 aa15.76■□□□□ 0.11
NUP50-219ENST00000497960 KRT3P12035 628 aa15.76■□□□□ 0.11
NUP50-219ENST00000497960 ENGP17813 658 aa15.76■□□□□ 0.11
NUP50-219ENST00000497960 IRAK1P51617 712 aa15.76■□□□□ 0.11
NUP50-219ENST00000497960 C9orf64Q5T6V5 341 aa15.76■□□□□ 0.11
NUP50-219ENST00000497960 ZNF571Q7Z3V5 609 aaPredicted RBP15.76■□□□□ 0.11
NUP50-219ENST00000497960 FAM131BQ86XD5 332 aa15.76■□□□□ 0.11
NUP50-219ENST00000497960 PHF13Q86YI8 300 aaPredicted RBP15.76■□□□□ 0.11
NUP50-219ENST00000497960 RXFP2Q8WXD0 754 aa15.76■□□□□ 0.11
NUP50-219ENST00000497960 FEM1AQ9BSK4 669 aa15.76■□□□□ 0.11
NUP50-219ENST00000497960 SELENOOQ9BVL4 669 aa15.76■□□□□ 0.11
NUP50-219ENST00000497960 BTBD1Q9H0C5 482 aa15.76■□□□□ 0.11
NUP50-219ENST00000497960 MUC3BQ9H195 1237 aa15.76■□□□□ 0.11
NUP50-219ENST00000497960 DEF6Q9H4E7 631 aa15.76■□□□□ 0.11
NUP50-219ENST00000497960 ANLNQ9NQW6 1124 aa15.76■□□□□ 0.11
NUP50-219ENST00000497960 SLC25A13Q9UJS0 675 aa15.76■□□□□ 0.11
NUP50-219ENST00000497960 TBC1D30Q9Y2I9 924 aa15.76■□□□□ 0.11
NUP50-219ENST00000497960 SNX10Q9Y5X0 201 aa15.76■□□□□ 0.11
NUP50-219ENST00000497960 NUMA1Q14980 2115 aa15.76■□□□□ 0.11
NUP50-219ENST00000497960 MUC22E2RYF6 1773 aaPredicted RBP15.75■□□□□ 0.11
NUP50-219ENST00000497960 CDX4O14627 284 aaPredicted RBP15.75■□□□□ 0.11
NUP50-219ENST00000497960 TM4SF5O14894 197 aa15.75■□□□□ 0.11
NUP50-219ENST00000497960 CNTN5O94779 1100 aa15.75■□□□□ 0.11
NUP50-219ENST00000497960 RHOCP08134 193 aa15.75■□□□□ 0.11
NUP50-219ENST00000497960 SYPP08247 313 aa15.75■□□□□ 0.11
NUP50-219ENST00000497960 MAOBP27338 520 aa15.75■□□□□ 0.11
NUP50-219ENST00000497960 MAPK8P45983 427 aa15.75■□□□□ 0.11
NUP50-219ENST00000497960 NUMBP49757 651 aa15.75■□□□□ 0.11
NUP50-219ENST00000497960 STK19P49842 368 aaPredicted RBP15.75■□□□□ 0.11
NUP50-219ENST00000497960 GSCP56915 257 aaPredicted RBP15.75■□□□□ 0.11
NUP50-219ENST00000497960 GSE1Q14687 1217 aa15.75■□□□□ 0.11
NUP50-219ENST00000497960 CDO1Q16878 200 aa15.75■□□□□ 0.11
NUP50-219ENST00000497960 UAP1L1Q3KQV9 507 aa15.75■□□□□ 0.11
NUP50-219ENST00000497960 ARL13BQ3SXY8 428 aa15.75■□□□□ 0.11
NUP50-219ENST00000497960 DCAF12L1Q5VU92 463 aa15.75■□□□□ 0.11
NUP50-219ENST00000497960 HGSNATQ68CP4 663 aa15.75■□□□□ 0.11
NUP50-219ENST00000497960 USP30Q70CQ3 517 aa15.75■□□□□ 0.11
NUP50-219ENST00000497960 BNIPLQ7Z465 357 aa15.75■□□□□ 0.11
NUP50-219ENST00000497960 DNASE2BQ8WZ79 361 aa15.75■□□□□ 0.11
NUP50-219ENST00000497960 ANP32BQ92688 251 aaKnown RBP15.75■□□□□ 0.11
NUP50-219ENST00000497960 SYT11Q9BT88 431 aa15.75■□□□□ 0.11
NUP50-219ENST00000497960 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.75■□□□□ 0.11
NUP50-219ENST00000497960 GTPBP2Q9BX10 602 aaKnown RBP15.75■□□□□ 0.11
NUP50-219ENST00000497960 MIR1-1HGQ9H1L0 117 aa15.75■□□□□ 0.11
NUP50-219ENST00000497960 PABPC3Q9H361 631 aaKnown RBP15.75■□□□□ 0.11
NUP50-219ENST00000497960 SGK2Q9HBY8 427 aa15.75■□□□□ 0.11
NUP50-219ENST00000497960 CAPN10Q9HC96 672 aa15.75■□□□□ 0.11
NUP50-219ENST00000497960 IMPACTQ9P2X3 320 aa15.75■□□□□ 0.11
NUP50-219ENST00000497960 CACNA1EQ15878 2313 aa15.74■□□□□ 0.11
NUP50-219ENST00000497960 ASCC3Q8N3C0 2202 aaKnown RBP15.74■□□□□ 0.11
NUP50-219ENST00000497960 TNRC6BQ9UPQ9 1833 aaKnown RBP15.74■□□□□ 0.11
NUP50-219ENST00000497960 ANKRD62A6NC57 917 aa15.74■□□□□ 0.11
NUP50-219ENST00000497960 C2CD4BA6NLJ0 364 aa15.74■□□□□ 0.11
NUP50-219ENST00000497960 DRGXA6NNA5 263 aa15.74■□□□□ 0.11
NUP50-219ENST00000497960 E9PAM4 449 aa15.74■□□□□ 0.11
NUP50-219ENST00000497960 I6L893 689 aaPredicted RBP15.74■□□□□ 0.11
NUP50-219ENST00000497960 SRGAP2O75044 1071 aa15.74■□□□□ 0.11
NUP50-219ENST00000497960 ENDOD1O94919 500 aa15.74■□□□□ 0.11
NUP50-219ENST00000497960 SEMA4FO95754 770 aa15.74■□□□□ 0.11
NUP50-219ENST00000497960 PLEKP08567 350 aaPredicted RBP15.74■□□□□ 0.11
NUP50-219ENST00000497960 HNRNPH3P31942 346 aaKnown RBP15.74■□□□□ 0.11
NUP50-219ENST00000497960 ACSL1P33121 698 aa15.74■□□□□ 0.11
NUP50-219ENST00000497960 PTPN9P43378 593 aa15.74■□□□□ 0.11
NUP50-219ENST00000497960 VASPP50552 380 aaPredicted RBP15.74■□□□□ 0.11
NUP50-219ENST00000497960 KRT83P78385 493 aa15.74■□□□□ 0.11
NUP50-219ENST00000497960 C1QBPQ07021 282 aaKnown RBP15.74■□□□□ 0.11
NUP50-219ENST00000497960 PTP4A2Q12974 167 aa15.74■□□□□ 0.11
NUP50-219ENST00000497960 ELAVL3Q14576 367 aaKnown RBP15.74■□□□□ 0.11
NUP50-219ENST00000497960 CST6Q15828 149 aa15.74■□□□□ 0.11
NUP50-219ENST00000497960 C15orf59Q2T9L4 293 aaPredicted RBP15.74■□□□□ 0.11
NUP50-219ENST00000497960 CCDC14Q49A88 953 aa15.74■□□□□ 0.11
NUP50-219ENST00000497960 ACCSLQ4AC99 568 aa15.74■□□□□ 0.11
NUP50-219ENST00000497960 ALFQ53S48 1182 aa15.74■□□□□ 0.11
NUP50-219ENST00000497960 C6orf118Q5T5N4 469 aa15.74■□□□□ 0.11
NUP50-219ENST00000497960 PPP1R2P3Q6NXS1 205 aa15.74■□□□□ 0.11
NUP50-219ENST00000497960 STRADAQ7RTN6 431 aa15.74■□□□□ 0.11
NUP50-219ENST00000497960 SETD3Q86TU7 594 aaPredicted RBP15.74■□□□□ 0.11
NUP50-219ENST00000497960 MMAAQ8IVH4 418 aaKnown RBP15.74■□□□□ 0.11
NUP50-219ENST00000497960 ZNF683Q8IZ20 524 aa15.74■□□□□ 0.11
NUP50-219ENST00000497960 STK40Q8N2I9 435 aa15.74■□□□□ 0.11
NUP50-219ENST00000497960 TC2NQ8N9U0 490 aa15.74■□□□□ 0.11
NUP50-219ENST00000497960 C3orf20Q8ND61 904 aa15.74■□□□□ 0.11
NUP50-219ENST00000497960 JOSD2Q8TAC2 188 aa15.74■□□□□ 0.11
NUP50-219ENST00000497960 SNX19Q92543 992 aa15.74■□□□□ 0.11
NUP50-219ENST00000497960 ALG14Q96F25 216 aa15.74■□□□□ 0.11
NUP50-219ENST00000497960 C2orf49Q9BVC5 232 aaPredicted RBP15.74■□□□□ 0.11
NUP50-219ENST00000497960 TMPRSS4Q9NRS4 437 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms