RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 ANKRD20A12PQ8NF67 263 aa6.37□□□□□ -1.39
BRCA1-224ENST00000497488 CADM4Q8NFZ8 388 aa6.37□□□□□ -1.39
BRCA1-224ENST00000497488 NEK9Q8TD19 979 aa6.37□□□□□ -1.39
BRCA1-224ENST00000497488 SLC7A6OSQ96CW6 309 aaPredicted RBP6.37□□□□□ -1.39
BRCA1-224ENST00000497488 TRIM44Q96DX7 344 aaPredicted RBP6.37□□□□□ -1.39
BRCA1-224ENST00000497488 LIN37Q96GY3 246 aaPredicted RBP6.37□□□□□ -1.39
BRCA1-224ENST00000497488 CFAP57Q96MR6 1250 aa6.37□□□□□ -1.39
BRCA1-224ENST00000497488 EIF3CQ99613 913 aaKnown RBP6.37□□□□□ -1.39
BRCA1-224ENST00000497488 STRA6Q9BX79 667 aa6.37□□□□□ -1.39
BRCA1-224ENST00000497488 C19orf44Q9H6X5 657 aa6.37□□□□□ -1.39
BRCA1-224ENST00000497488 MRPL44Q9H9J2 332 aaKnown RBP6.37□□□□□ -1.39
BRCA1-224ENST00000497488 FBXO28Q9NVF7 368 aa6.37□□□□□ -1.39
BRCA1-224ENST00000497488 THAP1Q9NVV9 213 aa6.37□□□□□ -1.39
BRCA1-224ENST00000497488 WSB2Q9NYS7 404 aaPredicted RBP6.37□□□□□ -1.39
BRCA1-224ENST00000497488 FBXL17Q9UF56 701 aa6.37□□□□□ -1.39
BRCA1-224ENST00000497488 HOOK1Q9UJC3 728 aaKnown RBP6.37□□□□□ -1.39
BRCA1-224ENST00000497488 OSGIN1Q9UJX0 560 aa6.37□□□□□ -1.39
BRCA1-224ENST00000497488 MKLN1Q9UL63 735 aa6.37□□□□□ -1.39
BRCA1-224ENST00000497488 NENFQ9UMX5 172 aa6.37□□□□□ -1.39
BRCA1-224ENST00000497488 UBE2J1Q9Y385 318 aaPredicted RBP6.37□□□□□ -1.39
BRCA1-224ENST00000497488 ARHGEF37A1IGU5 675 aa6.36□□□□□ -1.39
BRCA1-224ENST00000497488 PER2O15055 1255 aa6.36□□□□□ -1.39
BRCA1-224ENST00000497488 PAGE4O60829 102 aa6.36□□□□□ -1.39
BRCA1-224ENST00000497488 TRIM13O60858 407 aa6.36□□□□□ -1.39
BRCA1-224ENST00000497488 DIAPH2O60879 1101 aa6.36□□□□□ -1.39
BRCA1-224ENST00000497488 CYP2A6P11509 494 aaPredicted RBP6.36□□□□□ -1.39
BRCA1-224ENST00000497488 ZNF8P17098 575 aaPredicted RBP6.36□□□□□ -1.39
BRCA1-224ENST00000497488 SDHBP21912 280 aa6.36□□□□□ -1.39
BRCA1-224ENST00000497488 AVPR2P30518 371 aa6.36□□□□□ -1.39
BRCA1-224ENST00000497488 HOXA11P31270 313 aaPredicted RBP6.36□□□□□ -1.39
BRCA1-224ENST00000497488 CSF2RBP32927 897 aa6.36□□□□□ -1.39
BRCA1-224ENST00000497488 PBX1P40424 430 aa6.36□□□□□ -1.39
BRCA1-224ENST00000497488 ETV4P43268 484 aa6.36□□□□□ -1.39
BRCA1-224ENST00000497488 GCLCP48506 637 aaPredicted RBP6.36□□□□□ -1.39
BRCA1-224ENST00000497488 TKTL1P51854 596 aa6.36□□□□□ -1.39
BRCA1-224ENST00000497488 PMS2P54278 862 aa6.36□□□□□ -1.39
BRCA1-224ENST00000497488 HMGN5P82970 282 aaKnown RBP6.36□□□□□ -1.39
BRCA1-224ENST00000497488 LRRC74AQ0VAA2 488 aa6.36□□□□□ -1.39
BRCA1-224ENST00000497488 TOP3AQ13472 1001 aaPredicted RBP6.36□□□□□ -1.39
BRCA1-224ENST00000497488 TUBB2AQ13885 445 aa6.36□□□□□ -1.39
BRCA1-224ENST00000497488 RAB3GAP1Q15042 981 aa6.36□□□□□ -1.39
BRCA1-224ENST00000497488 RABEP1Q15276 862 aa6.36□□□□□ -1.39
BRCA1-224ENST00000497488 HYAL4Q2M3T9 481 aa6.36□□□□□ -1.39
BRCA1-224ENST00000497488 DPCR1Q3MIW9 517 aa6.36□□□□□ -1.39
BRCA1-224ENST00000497488 KBTBD12Q3ZCT8 623 aa6.36□□□□□ -1.39
BRCA1-224ENST00000497488 CERCAMQ5T4B2 595 aa6.36□□□□□ -1.39
BRCA1-224ENST00000497488 KIAA0930Q6ICG6 404 aaPredicted RBP6.36□□□□□ -1.39
BRCA1-224ENST00000497488 HMBOX1Q6NT76 420 aa6.36□□□□□ -1.39
BRCA1-224ENST00000497488 TMEM81Q6P7N7 255 aa6.36□□□□□ -1.39
BRCA1-224ENST00000497488 KDELC1Q6UW63 502 aa6.36□□□□□ -1.39
BRCA1-224ENST00000497488 KIAA1324Q6UXG2 1013 aaKnown RBP6.36□□□□□ -1.39
BRCA1-224ENST00000497488 LINC00696Q6ZRV3 163 aa6.36□□□□□ -1.39
BRCA1-224ENST00000497488 ERN2Q76MJ5 926 aaKnown RBP6.36□□□□□ -1.39
BRCA1-224ENST00000497488 PPP1R42Q7Z4L9 355 aa6.36□□□□□ -1.39
BRCA1-224ENST00000497488 MINDY1Q8N5J2 469 aa6.36□□□□□ -1.39
BRCA1-224ENST00000497488 PSD4Q8NDX1 1056 aa6.36□□□□□ -1.39
BRCA1-224ENST00000497488 CTCFLQ8NI51 663 aaPredicted RBP6.36□□□□□ -1.39
BRCA1-224ENST00000497488 SHKBP1Q8TBC3 707 aa6.36□□□□□ -1.39
BRCA1-224ENST00000497488 CPA5Q8WXQ8 436 aa6.36□□□□□ -1.39
BRCA1-224ENST00000497488 LRIG1Q96JA1 1093 aa6.36□□□□□ -1.39
BRCA1-224ENST00000497488 FAM84AQ96KN4 292 aa6.36□□□□□ -1.39
BRCA1-224ENST00000497488 ZSWIM3Q96MP5 696 aa6.36□□□□□ -1.39
BRCA1-224ENST00000497488 TUBB2BQ9BVA1 445 aa6.36□□□□□ -1.39
BRCA1-224ENST00000497488 TEX13BQ9BXU2 312 aa6.36□□□□□ -1.39
BRCA1-224ENST00000497488 EPHX3Q9H6B9 360 aa6.36□□□□□ -1.39
BRCA1-224ENST00000497488 FBRSL1Q9HCM7 1045 aaKnown RBP6.36□□□□□ -1.39
BRCA1-224ENST00000497488 PDE11AQ9HCR9 933 aa6.36□□□□□ -1.39
BRCA1-224ENST00000497488 IL1RAPL2Q9NP60 686 aa6.36□□□□□ -1.39
BRCA1-224ENST00000497488 RIMKLBQ9ULI2 386 aa6.36□□□□□ -1.39
BRCA1-224ENST00000497488 PLA2G2DQ9UNK4 145 aa6.36□□□□□ -1.39
BRCA1-224ENST00000497488 MTMR6Q9Y217 621 aa6.36□□□□□ -1.39
BRCA1-224ENST00000497488 RAD54BQ9Y620 910 aa6.36□□□□□ -1.39
BRCA1-224ENST00000497488 AOX1Q06278 1338 aa6.35□□□□□ -1.39
BRCA1-224ENST00000497488 A0A1W2PRV1 198 aa6.35□□□□□ -1.39
BRCA1-224ENST00000497488 TCRBV21S2A2A0A5A6 115 aa6.35□□□□□ -1.39
BRCA1-224ENST00000497488 OR6C76A6NM76 312 aa6.35□□□□□ -1.39
BRCA1-224ENST00000497488 M0QZQ0 153 aa6.35□□□□□ -1.39
BRCA1-224ENST00000497488 GRM8O00222 908 aa6.35□□□□□ -1.39
BRCA1-224ENST00000497488 ADAMDEC1O15204 470 aa6.35□□□□□ -1.39
BRCA1-224ENST00000497488 NKX2-8O15522 239 aa6.35□□□□□ -1.39
BRCA1-224ENST00000497488 PRPF4O43172 522 aaKnown RBP eCLIP6.35□□□□□ -1.395e-17■■■■■ 29.7
BRCA1-224ENST00000497488 LIASO43766 372 aa6.35□□□□□ -1.39
BRCA1-224ENST00000497488 APBB3O95704 486 aa6.35□□□□□ -1.39
BRCA1-224ENST00000497488 HPXP02790 462 aa6.35□□□□□ -1.39
BRCA1-224ENST00000497488 FYNP06241 537 aa6.35□□□□□ -1.39
BRCA1-224ENST00000497488 PEPDP12955 493 aa6.35□□□□□ -1.39
BRCA1-224ENST00000497488 DRD1P21728 446 aa6.35□□□□□ -1.39
BRCA1-224ENST00000497488 IL10P22301 178 aa6.35□□□□□ -1.39
BRCA1-224ENST00000497488 SLC6A2P23975 617 aa6.35□□□□□ -1.39
BRCA1-224ENST00000497488 PRKAR1BP31321 381 aa6.35□□□□□ -1.39
BRCA1-224ENST00000497488 HNF1BP35680 557 aa6.35□□□□□ -1.39
BRCA1-224ENST00000497488 CD96P40200 585 aa6.35□□□□□ -1.39
BRCA1-224ENST00000497488 AKAP17AQ02040 695 aaKnown RBP6.35□□□□□ -1.39
BRCA1-224ENST00000497488 ZP2Q05996 745 aa6.35□□□□□ -1.39
BRCA1-224ENST00000497488 CSTF3Q12996 717 aaKnown RBP6.35□□□□□ -1.39
BRCA1-224ENST00000497488 MTAPQ13126 283 aa6.35□□□□□ -1.39
BRCA1-224ENST00000497488 CCNIQ14094 377 aa6.35□□□□□ -1.39
BRCA1-224ENST00000497488 ZNF667Q5HYK9 610 aa6.35□□□□□ -1.39
BRCA1-224ENST00000497488 FAM90A2PQ658T7 463 aa6.35□□□□□ -1.39
BRCA1-224ENST00000497488 KRT40Q6A162 431 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms