RNA–Protein interactions for RNA: ENST00000497216.2

SPTAN1-209, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 351 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-209ENST00000497216 RTP5Q14D33 572 aa13.93□□□□□ -0.18
SPTAN1-209ENST00000497216 RABGAP1LQ5R372 815 aa13.93□□□□□ -0.18
SPTAN1-209ENST00000497216 DSG4Q86SJ6 1040 aa13.93□□□□□ -0.18
SPTAN1-209ENST00000497216 PRPF39Q86UA1 669 aaKnown RBP13.93□□□□□ -0.18
SPTAN1-209ENST00000497216 TRIM69Q86WT6 500 aa13.93□□□□□ -0.18
SPTAN1-209ENST00000497216 ZNF606Q8WXB4 792 aa13.93□□□□□ -0.18
SPTAN1-209ENST00000497216 RFFLQ8WZ73 363 aa13.93□□□□□ -0.18
SPTAN1-209ENST00000497216 MED15Q96RN5 788 aa13.93□□□□□ -0.18
SPTAN1-209ENST00000497216 PPP1R9BQ96SB3 815 aa13.93□□□□□ -0.18
SPTAN1-209ENST00000497216 SLC12A6Q9UHW9 1150 aa13.93□□□□□ -0.18
SPTAN1-209ENST00000497216 BPTFQ12830 3046 aa13.93□□□□□ -0.18
SPTAN1-209ENST00000497216 TBC1D3DA0A087WVF3 549 aa13.92□□□□□ -0.18
SPTAN1-209ENST00000497216 TBC1D3IA0A087WXS9 549 aa13.92□□□□□ -0.18
SPTAN1-209ENST00000497216 TBC1D3EA0A087X179 549 aa13.92□□□□□ -0.18
SPTAN1-209ENST00000497216 TBC1D3KA0A087X1G2 549 aa13.92□□□□□ -0.18
SPTAN1-209ENST00000497216 BICDL2A1A5D9 508 aa13.92□□□□□ -0.18
SPTAN1-209ENST00000497216 GOLGA6L4A6NEF3 574 aa13.92□□□□□ -0.18
SPTAN1-209ENST00000497216 TBC1D3FA6NER0 549 aaPredicted RBP13.92□□□□□ -0.18
SPTAN1-209ENST00000497216 PPP1R3GB7ZBB8 358 aa13.92□□□□□ -0.18
SPTAN1-209ENST00000497216 TBC1D3LB9A6J9 549 aa13.92□□□□□ -0.18
SPTAN1-209ENST00000497216 ATP9BO43861 1147 aa13.92□□□□□ -0.18
SPTAN1-209ENST00000497216 MAGEC1O60732 1142 aa13.92□□□□□ -0.18
SPTAN1-209ENST00000497216 GNA14O95837 355 aa13.92□□□□□ -0.18
SPTAN1-209ENST00000497216 GLI1P08151 1106 aa13.92□□□□□ -0.18
SPTAN1-209ENST00000497216 TBC1D3HP0C7X1 549 aa13.92□□□□□ -0.18
SPTAN1-209ENST00000497216 VAV1P15498 845 aa13.92□□□□□ -0.18
SPTAN1-209ENST00000497216 PDGFRAP16234 1089 aa13.92□□□□□ -0.18
SPTAN1-209ENST00000497216 EIF2S3P41091 472 aaKnown RBP13.92□□□□□ -0.18
SPTAN1-209ENST00000497216 PITX1P78337 314 aaPredicted RBP13.92□□□□□ -0.18
SPTAN1-209ENST00000497216 MTA1Q13330 715 aa13.92□□□□□ -0.18
SPTAN1-209ENST00000497216 PDCLQ13371 301 aa13.92□□□□□ -0.18
SPTAN1-209ENST00000497216 HES3Q5TGS1 186 aa13.92□□□□□ -0.18
SPTAN1-209ENST00000497216 FAM46CQ5VWP2 391 aa13.92□□□□□ -0.18
SPTAN1-209ENST00000497216 TBC1D3GQ6DHY5 549 aa13.92□□□□□ -0.18
SPTAN1-209ENST00000497216 SMYD5Q6GMV2 418 aa13.92□□□□□ -0.18
SPTAN1-209ENST00000497216 TBC1D3CQ6IPX1 549 aa13.92□□□□□ -0.18
SPTAN1-209ENST00000497216 CXorf57Q6NSI4 855 aaKnown RBP13.92□□□□□ -0.18
SPTAN1-209ENST00000497216 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.92□□□□□ -0.18
SPTAN1-209ENST00000497216 ENOSF1Q7L5Y1 443 aa13.92□□□□□ -0.18
SPTAN1-209ENST00000497216 SPATS2Q86XZ4 545 aaKnown RBP13.92□□□□□ -0.18
SPTAN1-209ENST00000497216 TBC1D3Q8IZP1 549 aaPredicted RBP13.92□□□□□ -0.18
SPTAN1-209ENST00000497216 OR8D1Q8WZ84 308 aa13.92□□□□□ -0.18
SPTAN1-209ENST00000497216 ALG14Q96F25 216 aa13.92□□□□□ -0.18
SPTAN1-209ENST00000497216 CRELD1Q96HD1 420 aa13.92□□□□□ -0.18
SPTAN1-209ENST00000497216 SLC2A13Q96QE2 648 aa13.92□□□□□ -0.18
SPTAN1-209ENST00000497216 UBL7Q96S82 380 aaPredicted RBP13.92□□□□□ -0.18
SPTAN1-209ENST00000497216 INTS2Q9H0H0 1204 aaKnown RBP13.92□□□□□ -0.18
SPTAN1-209ENST00000497216 ASNSD1Q9NWL6 643 aa13.92□□□□□ -0.18
SPTAN1-209ENST00000497216 MAN1B1Q9UKM7 699 aa13.92□□□□□ -0.18
SPTAN1-209ENST00000497216 TRPM6Q9BX84 2022 aa13.91□□□□□ -0.18
SPTAN1-209ENST00000497216 KALRNO60229 2985 aa13.91□□□□□ -0.18
SPTAN1-209ENST00000497216 MCF2LO15068 1137 aa13.91□□□□□ -0.18
SPTAN1-209ENST00000497216 RTN2O75298 545 aa13.91□□□□□ -0.18
SPTAN1-209ENST00000497216 LETM1O95202 739 aaPredicted RBP13.91□□□□□ -0.18
SPTAN1-209ENST00000497216 AFPP02771 609 aaKnown RBP13.91□□□□□ -0.18
SPTAN1-209ENST00000497216 KRT5P13647 590 aa13.91□□□□□ -0.18
SPTAN1-209ENST00000497216 CKMT2P17540 419 aa13.91□□□□□ -0.18
SPTAN1-209ENST00000497216 BMP6P22004 513 aa13.91□□□□□ -0.18
SPTAN1-209ENST00000497216 METAP1P53582 386 aa13.91□□□□□ -0.18
SPTAN1-209ENST00000497216 BNIP3Q12983 259 aa13.91□□□□□ -0.18
SPTAN1-209ENST00000497216 TARDBPQ13148 414 aaKnown RBP eCLIP13.91□□□□□ -0.18
SPTAN1-209ENST00000497216 AGBL4Q5VU57 503 aa13.91□□□□□ -0.18
SPTAN1-209ENST00000497216 FBXL22Q6P050 247 aa13.91□□□□□ -0.18
SPTAN1-209ENST00000497216 SNIP1Q8TAD8 396 aaKnown RBP13.91□□□□□ -0.18
SPTAN1-209ENST00000497216 NELFBQ8WX92 580 aa13.91□□□□□ -0.18
SPTAN1-209ENST00000497216 SLC25A13Q9UJS0 675 aa13.91□□□□□ -0.18
SPTAN1-209ENST00000497216 SARDHQ9UL12 918 aa13.91□□□□□ -0.18
SPTAN1-209ENST00000497216 PPM1HQ9ULR3 514 aa13.91□□□□□ -0.18
SPTAN1-209ENST00000497216 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.91□□□□□ -0.18
SPTAN1-209ENST00000497216 OR51B4Q9Y5P0 310 aa13.91□□□□□ -0.18
SPTAN1-209ENST00000497216 C1QTNF3-AMACRE9PGA6 284 aa13.9□□□□□ -0.18
SPTAN1-209ENST00000497216 PRAMEF26H0Y7S4 382 aa13.9□□□□□ -0.18
SPTAN1-209ENST00000497216 TK2O00142 265 aa13.9□□□□□ -0.18
SPTAN1-209ENST00000497216 TLX3O43711 291 aaPredicted RBP13.9□□□□□ -0.18
SPTAN1-209ENST00000497216 RNGTTO60942 597 aaKnown RBP13.9□□□□□ -0.18
SPTAN1-209ENST00000497216 ACP1P24666 158 aa13.9□□□□□ -0.18
SPTAN1-209ENST00000497216 GNA15P30679 374 aa13.9□□□□□ -0.18
SPTAN1-209ENST00000497216 CCR1P32246 355 aa13.9□□□□□ -0.18
SPTAN1-209ENST00000497216 CLDN6P56747 220 aa13.9□□□□□ -0.18
SPTAN1-209ENST00000497216 CDK17Q00537 523 aa13.9□□□□□ -0.18
SPTAN1-209ENST00000497216 CNTN1Q12860 1018 aa13.9□□□□□ -0.18
SPTAN1-209ENST00000497216 TAF5Q15542 800 aa13.9□□□□□ -0.18
SPTAN1-209ENST00000497216 PROX2Q3B8N5 592 aa13.9□□□□□ -0.18
SPTAN1-209ENST00000497216 C5orf22Q49AR2 442 aa13.9□□□□□ -0.18
SPTAN1-209ENST00000497216 SETMARQ53H47 684 aaPredicted RBP13.9□□□□□ -0.18
SPTAN1-209ENST00000497216 EFHC1Q5JVL4 640 aa13.9□□□□□ -0.18
SPTAN1-209ENST00000497216 KLHL10Q6JEL2 608 aa13.9□□□□□ -0.18
SPTAN1-209ENST00000497216 CIR1Q86X95 450 aaPredicted RBP13.9□□□□□ -0.18
SPTAN1-209ENST00000497216 FAM81BQ96LP2 452 aa13.9□□□□□ -0.18
SPTAN1-209ENST00000497216 DCBLD2Q96PD2 775 aa13.9□□□□□ -0.18
SPTAN1-209ENST00000497216 FEM1AQ9BSK4 669 aa13.9□□□□□ -0.18
SPTAN1-209ENST00000497216 PRORYQ9H606 182 aa13.9□□□□□ -0.18
SPTAN1-209ENST00000497216 FAM204AQ9H8W3 233 aa13.9□□□□□ -0.18
SPTAN1-209ENST00000497216 PREBQ9HCU5 417 aa13.9□□□□□ -0.18
SPTAN1-209ENST00000497216 UBE2TQ9NPD8 197 aaPredicted RBP13.9□□□□□ -0.18
SPTAN1-209ENST00000497216 DDIT4Q9NX09 232 aa13.9□□□□□ -0.18
SPTAN1-209ENST00000497216 CHD5Q8TDI0 1954 aa13.9□□□□□ -0.18
SPTAN1-209ENST00000497216 CFAP46Q8IYW2 2715 aa13.9□□□□□ -0.18
SPTAN1-209ENST00000497216 SETXQ7Z333 2677 aaKnown RBP13.89□□□□□ -0.19
SPTAN1-209ENST00000497216 EIF4E1BA6NMX2 242 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms