RNA–Protein interactions for RNA: ENST00000496527.1

CHRD-217, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 588 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-217ENST00000496527 MIPP30301 263 aa23.31■■□□□ 1.32
CHRD-217ENST00000496527 MAPKAPK2P49137 400 aa23.31■■□□□ 1.32
CHRD-217ENST00000496527 PIGHQ14442 188 aaPredicted RBP23.31■■□□□ 1.32
CHRD-217ENST00000496527 ERMARDQ5T6L9 678 aa23.31■■□□□ 1.32
CHRD-217ENST00000496527 H2AFVQ71UI9 128 aa23.31■■□□□ 1.32
CHRD-217ENST00000496527 METTL3Q86U44 580 aaKnown RBP23.31■■□□□ 1.32
CHRD-217ENST00000496527 TC2NQ8N9U0 490 aa23.31■■□□□ 1.32
CHRD-217ENST00000496527 DUSP15Q9H1R2 295 aaPredicted RBP23.31■■□□□ 1.32
CHRD-217ENST00000496527 MTG2Q9H4K7 406 aa23.31■■□□□ 1.32
CHRD-217ENST00000496527 TMEM248Q9NWD8 314 aa23.31■■□□□ 1.32
CHRD-217ENST00000496527 ANAPC7Q9UJX3 599 aa23.31■■□□□ 1.32
CHRD-217ENST00000496527 CYP8B1Q9UNU6 501 aa23.31■■□□□ 1.32
CHRD-217ENST00000496527 AP4E1Q9UPM8 1137 aa23.31■■□□□ 1.32
CHRD-217ENST00000496527 CKAP5Q14008 2032 aa23.3■■□□□ 1.32
CHRD-217ENST00000496527 EDDM13A0A1B0GTR0 161 aa23.3■■□□□ 1.32
CHRD-217ENST00000496527 TARSL2A2RTX5 802 aaKnown RBP23.3■■□□□ 1.32
CHRD-217ENST00000496527 LRCH4O75427 683 aa23.3■■□□□ 1.32
CHRD-217ENST00000496527 BCKDHBP21953 392 aa23.3■■□□□ 1.32
CHRD-217ENST00000496527 EPHB2P29323 1055 aa23.3■■□□□ 1.32
CHRD-217ENST00000496527 GNA12Q03113 381 aa23.3■■□□□ 1.32
CHRD-217ENST00000496527 NLRP14Q86W24 1093 aa23.3■■□□□ 1.32
CHRD-217ENST00000496527 FRMD1Q8N878 549 aa23.3■■□□□ 1.32
CHRD-217ENST00000496527 DCAF4L2Q8NA75 395 aa23.3■■□□□ 1.32
CHRD-217ENST00000496527 OR7D4Q8NG98 312 aa23.3■■□□□ 1.32
CHRD-217ENST00000496527 LOXL4Q96JB6 756 aa23.3■■□□□ 1.32
CHRD-217ENST00000496527 PSMB7Q99436 277 aa23.3■■□□□ 1.32
CHRD-217ENST00000496527 SPON2Q9BUD6 331 aa23.3■■□□□ 1.32
CHRD-217ENST00000496527 PACSIN1Q9BY11 444 aa23.3■■□□□ 1.32
CHRD-217ENST00000496527 DHX35Q9H5Z1 703 aaKnown RBP23.3■■□□□ 1.32
CHRD-217ENST00000496527 SPTLC3Q9NUV7 552 aa23.3■■□□□ 1.32
CHRD-217ENST00000496527 GPATCH2LQ9NWQ4 482 aa23.3■■□□□ 1.32
CHRD-217ENST00000496527 CTTNBP2NLQ9P2B4 639 aa23.3■■□□□ 1.32
CHRD-217ENST00000496527 DNAI1Q9UI46 699 aa23.3■■□□□ 1.32
CHRD-217ENST00000496527 USP18Q9UMW8 372 aa23.3■■□□□ 1.32
CHRD-217ENST00000496527 GPR179Q6PRD1 2367 aa23.3■■□□□ 1.32
CHRD-217ENST00000496527 DOCK4Q8N1I0 1966 aa23.29■■□□□ 1.32
CHRD-217ENST00000496527 VPS13AQ96RL7 3174 aa23.29■■□□□ 1.32
CHRD-217ENST00000496527 EIF3CLB5ME19 914 aaKnown RBP23.29■■□□□ 1.32
CHRD-217ENST00000496527 MYO1FO00160 1098 aa23.29■■□□□ 1.32
CHRD-217ENST00000496527 SIN3BO75182 1162 aa23.29■■□□□ 1.32
CHRD-217ENST00000496527 PCK1P35558 622 aa23.29■■□□□ 1.32
CHRD-217ENST00000496527 ETFBP38117 255 aa23.29■■□□□ 1.32
CHRD-217ENST00000496527 VASPP50552 380 aaPredicted RBP23.29■■□□□ 1.32
CHRD-217ENST00000496527 ACCSLQ4AC99 568 aa23.29■■□□□ 1.32
CHRD-217ENST00000496527 SLC36A4Q6YBV0 504 aa23.29■■□□□ 1.32
CHRD-217ENST00000496527 CACUL1Q86Y37 369 aa23.29■■□□□ 1.32
CHRD-217ENST00000496527 DCLK2Q8N568 766 aa23.29■■□□□ 1.32
CHRD-217ENST00000496527 ZNF564Q8TBZ8 553 aaPredicted RBP23.29■■□□□ 1.32
CHRD-217ENST00000496527 BTBD6Q96KE9 485 aa23.29■■□□□ 1.32
CHRD-217ENST00000496527 PEBP4Q96S96 227 aa23.29■■□□□ 1.32
CHRD-217ENST00000496527 EIF3CQ99613 913 aaKnown RBP23.29■■□□□ 1.32
CHRD-217ENST00000496527 SNRNP25Q9BV90 132 aaKnown RBP23.29■■□□□ 1.32
CHRD-217ENST00000496527 CATSPERBQ9H7T0 1116 aa23.29■■□□□ 1.32
CHRD-217ENST00000496527 ATP13A1Q9HD20 1204 aa23.29■■□□□ 1.32
CHRD-217ENST00000496527 UVRAGQ9P2Y5 699 aa23.29■■□□□ 1.32
CHRD-217ENST00000496527 VPS51Q9UID3 782 aa23.29■■□□□ 1.32
CHRD-217ENST00000496527 MBD1Q9UIS9 605 aaPredicted RBP23.29■■□□□ 1.32
CHRD-217ENST00000496527 MYO15AQ9UKN7 3530 aa23.29■■□□□ 1.32
CHRD-217ENST00000496527 NEU3Q9UQ49 428 aa23.29■■□□□ 1.32
CHRD-217ENST00000496527 RIF1Q5UIP0 2472 aaKnown RBP23.28■■□□□ 1.32
CHRD-217ENST00000496527 IGHV1OR15-9A0A0B4J2B8 117 aa23.28■■□□□ 1.32
CHRD-217ENST00000496527 SNAP91O60641 907 aa23.28■■□□□ 1.32
CHRD-217ENST00000496527 RNASEH1O60930 286 aaKnown RBP23.28■■□□□ 1.32
CHRD-217ENST00000496527 HTR7P34969 479 aa23.28■■□□□ 1.32
CHRD-217ENST00000496527 TPI1P60174 286 aa23.28■■□□□ 1.32
CHRD-217ENST00000496527 SEMA3BQ13214 749 aa23.28■■□□□ 1.32
CHRD-217ENST00000496527 C9orf64Q5T6V5 341 aa23.28■■□□□ 1.32
CHRD-217ENST00000496527 PMS2CLQ68D20 193 aa23.28■■□□□ 1.32
CHRD-217ENST00000496527 IL31Q6EBC2 164 aa23.28■■□□□ 1.32
CHRD-217ENST00000496527 LPCAT2Q7L5N7 544 aa23.28■■□□□ 1.32
CHRD-217ENST00000496527 PSTKQ8IV42 348 aaKnown RBP23.28■■□□□ 1.32
CHRD-217ENST00000496527 NIPA2Q8N8Q9 360 aa23.28■■□□□ 1.32
CHRD-217ENST00000496527 ITM2CQ9NQX7 267 aa23.28■■□□□ 1.32
CHRD-217ENST00000496527 NDFIP2Q9NV92 336 aa23.28■■□□□ 1.32
CHRD-217ENST00000496527 CBX4O00257 560 aa23.27■■□□□ 1.32
CHRD-217ENST00000496527 ATP9BO43861 1147 aa23.27■■□□□ 1.32
CHRD-217ENST00000496527 TMEM253P0C7T8 217 aa23.27■■□□□ 1.32
CHRD-217ENST00000496527 RPS14P62263 151 aaKnown RBP23.27■■□□□ 1.32
CHRD-217ENST00000496527 RPL6Q02878 288 aaKnown RBP23.27■■□□□ 1.32
CHRD-217ENST00000496527 CA9Q16790 459 aa23.27■■□□□ 1.32
CHRD-217ENST00000496527 DAB2IPQ5VWQ8 1189 aa23.27■■□□□ 1.32
CHRD-217ENST00000496527 ZNF776Q68DI1 518 aaPredicted RBP23.27■■□□□ 1.32
CHRD-217ENST00000496527 SH2D3CQ8N5H7 860 aa23.27■■□□□ 1.32
CHRD-217ENST00000496527 RTL3Q8N8U3 475 aaKnown RBP23.27■■□□□ 1.32
CHRD-217ENST00000496527 ATP11CQ8NB49 1132 aa23.27■■□□□ 1.32
CHRD-217ENST00000496527 PTPRN2Q92932 1015 aa23.27■■□□□ 1.32
CHRD-217ENST00000496527 MAGEH1Q9H213 219 aa23.27■■□□□ 1.32
CHRD-217ENST00000496527 CD93Q9NPY3 652 aa23.27■■□□□ 1.32
CHRD-217ENST00000496527 USP36Q9P275 1121 aaKnown RBP23.27■■□□□ 1.32
CHRD-217ENST00000496527 HS3ST2Q9Y278 367 aa23.27■■□□□ 1.32
CHRD-217ENST00000496527 OTOGLQ3ZCN5 2332 aa23.26■■□□□ 1.31
CHRD-217ENST00000496527 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa23.26■■□□□ 1.31
CHRD-217ENST00000496527 EEF2KO00418 725 aaKnown RBP23.26■■□□□ 1.31
CHRD-217ENST00000496527 FGF10O15520 208 aaPredicted RBP23.26■■□□□ 1.31
CHRD-217ENST00000496527 RAMP2O60895 175 aa23.26■■□□□ 1.31
CHRD-217ENST00000496527 NDUFS2O75306 463 aa23.26■■□□□ 1.31
CHRD-217ENST00000496527 EPN2O95208 641 aa23.26■■□□□ 1.31
CHRD-217ENST00000496527 DNTTP04053 509 aa23.26■■□□□ 1.31
CHRD-217ENST00000496527 OXTRP30559 389 aa23.26■■□□□ 1.31
CHRD-217ENST00000496527 DHPSP49366 369 aaPredicted RBP23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms