RNA–Protein interactions for RNA: ENST00000496222.1

TRIM59-207, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-207ENST00000496222 FAM72DQ6L9T8 149 aa12.66□□□□□ -0.38
TRIM59-207ENST00000496222 SLC23A3Q6PIS1 610 aa12.66□□□□□ -0.38
TRIM59-207ENST00000496222 ERMP1Q7Z2K6 904 aa12.66□□□□□ -0.38
TRIM59-207ENST00000496222 SETD3Q86TU7 594 aaPredicted RBP12.66□□□□□ -0.38
TRIM59-207ENST00000496222 NLRP14Q86W24 1093 aa12.66□□□□□ -0.38
TRIM59-207ENST00000496222 FAM72BQ86X60 149 aa12.66□□□□□ -0.38
TRIM59-207ENST00000496222 CACUL1Q86Y37 369 aa12.66□□□□□ -0.38
TRIM59-207ENST00000496222 CCDC185Q8N715 623 aa12.66□□□□□ -0.38
TRIM59-207ENST00000496222 C12orf50Q8NA57 414 aaPredicted RBP12.66□□□□□ -0.38
TRIM59-207ENST00000496222 CADM4Q8NFZ8 388 aa12.66□□□□□ -0.38
TRIM59-207ENST00000496222 C1orf216Q8TAB5 229 aa12.66□□□□□ -0.38
TRIM59-207ENST00000496222 FAM172AQ8WUF8 416 aa12.66□□□□□ -0.38
TRIM59-207ENST00000496222 DNASE2BQ8WZ79 361 aa12.66□□□□□ -0.38
TRIM59-207ENST00000496222 VCPIP1Q96JH7 1222 aa12.66□□□□□ -0.38
TRIM59-207ENST00000496222 RTKNQ9BST9 563 aa12.66□□□□□ -0.38
TRIM59-207ENST00000496222 NUP58Q9BVL2 599 aa12.66□□□□□ -0.38
TRIM59-207ENST00000496222 SELENOOQ9BVL4 669 aa12.66□□□□□ -0.38
TRIM59-207ENST00000496222 GPR174Q9BXC1 333 aa12.66□□□□□ -0.38
TRIM59-207ENST00000496222 CAPN10Q9HC96 672 aa12.66□□□□□ -0.38
TRIM59-207ENST00000496222 SEPT11Q9NVA2 429 aaKnown RBP12.66□□□□□ -0.38
TRIM59-207ENST00000496222 PPARGC1AQ9UBK2 798 aaKnown RBP12.66□□□□□ -0.38
TRIM59-207ENST00000496222 SPTBN2O15020 2390 aa12.65□□□□□ -0.38
TRIM59-207ENST00000496222 ADAMTS9Q9P2N4 1935 aa12.65□□□□□ -0.38
TRIM59-207ENST00000496222 EDDM13A0A1B0GTR0 161 aa12.65□□□□□ -0.38
TRIM59-207ENST00000496222 DCDC2BA2VCK2 349 aa12.65□□□□□ -0.38
TRIM59-207ENST00000496222 METTL12A8MUP2 240 aa12.65□□□□□ -0.38
TRIM59-207ENST00000496222 KHNYNO15037 678 aaKnown RBP12.65□□□□□ -0.38
TRIM59-207ENST00000496222 CCP110O43303 1012 aa12.65□□□□□ -0.38
TRIM59-207ENST00000496222 SNAP91O60641 907 aa12.65□□□□□ -0.38
TRIM59-207ENST00000496222 SRGAP2O75044 1071 aa12.65□□□□□ -0.38
TRIM59-207ENST00000496222 MT-CO1P00395 513 aa12.65□□□□□ -0.38
TRIM59-207ENST00000496222 ACADMP11310 421 aa12.65□□□□□ -0.38
TRIM59-207ENST00000496222 SKILP12757 684 aa12.65□□□□□ -0.38
TRIM59-207ENST00000496222 GPD1P21695 349 aa12.65□□□□□ -0.38
TRIM59-207ENST00000496222 SCAPQ12770 1279 aa12.65□□□□□ -0.38
TRIM59-207ENST00000496222 MAMLD1Q13495 774 aa12.65□□□□□ -0.38
TRIM59-207ENST00000496222 TRIM61Q5EBN2 209 aa12.65□□□□□ -0.38
TRIM59-207ENST00000496222 ZNF776Q68DI1 518 aaPredicted RBP12.65□□□□□ -0.38
TRIM59-207ENST00000496222 PLEKHA7Q6IQ23 1121 aa12.65□□□□□ -0.38
TRIM59-207ENST00000496222 DNAJC24Q6P3W2 148 aa12.65□□□□□ -0.38
TRIM59-207ENST00000496222 LRRC31Q6UY01 552 aa12.65□□□□□ -0.38
TRIM59-207ENST00000496222 TFAP2DQ7Z6R9 452 aa12.65□□□□□ -0.38
TRIM59-207ENST00000496222 STK40Q8N2I9 435 aa12.65□□□□□ -0.38
TRIM59-207ENST00000496222 ARFGAP1Q8N6T3 406 aa12.65□□□□□ -0.38
TRIM59-207ENST00000496222 SYN2Q92777 582 aaPredicted RBP12.65□□□□□ -0.38
TRIM59-207ENST00000496222 NTAN1Q96AB6 310 aa12.65□□□□□ -0.38
TRIM59-207ENST00000496222 MCEEQ96PE7 176 aa12.65□□□□□ -0.38
TRIM59-207ENST00000496222 NDFIP2Q9NV92 336 aa12.65□□□□□ -0.38
TRIM59-207ENST00000496222 OR12D3Q9UGF7 316 aa12.65□□□□□ -0.38
TRIM59-207ENST00000496222 SERGEFQ9UGK8 458 aa12.65□□□□□ -0.38
TRIM59-207ENST00000496222 HS3ST2Q9Y278 367 aa12.65□□□□□ -0.38
TRIM59-207ENST00000496222 CNOT1A5YKK6 2376 aaKnown RBP12.64□□□□□ -0.39
TRIM59-207ENST00000496222 ILVBLA1L0T0 632 aa12.64□□□□□ -0.39
TRIM59-207ENST00000496222 TMCO5BA8MYB1 307 aa12.64□□□□□ -0.39
TRIM59-207ENST00000496222 NDUFS2O75306 463 aa12.64□□□□□ -0.39
TRIM59-207ENST00000496222 ZNF821O75541 412 aaPredicted RBP12.64□□□□□ -0.39
TRIM59-207ENST00000496222 ZMPSTE24O75844 475 aa12.64□□□□□ -0.39
TRIM59-207ENST00000496222 CD160O95971 181 aa12.64□□□□□ -0.39
TRIM59-207ENST00000496222 FTLP02792 175 aaPredicted RBP12.64□□□□□ -0.39
TRIM59-207ENST00000496222 RHOCP08134 193 aa12.64□□□□□ -0.39
TRIM59-207ENST00000496222 PLEKP08567 350 aaPredicted RBP12.64□□□□□ -0.39
TRIM59-207ENST00000496222 SRCP12931 536 aa12.64□□□□□ -0.39
TRIM59-207ENST00000496222 GLDCP23378 1020 aa12.64□□□□□ -0.39
TRIM59-207ENST00000496222 MAOBP27338 520 aa12.64□□□□□ -0.39
TRIM59-207ENST00000496222 DPP6P42658 865 aa12.64□□□□□ -0.39
TRIM59-207ENST00000496222 KLHL30Q0D2K2 578 aa12.64□□□□□ -0.39
TRIM59-207ENST00000496222 ZNF252P-AS1Q0IIN9 211 aa12.64□□□□□ -0.39
TRIM59-207ENST00000496222 CST6Q15828 149 aa12.64□□□□□ -0.39
TRIM59-207ENST00000496222 DUOXA1Q1HG43 343 aa12.64□□□□□ -0.39
TRIM59-207ENST00000496222 DGLUCYQ7Z3D6 616 aa12.64□□□□□ -0.39
TRIM59-207ENST00000496222 FAM124AQ86V42 546 aa12.64□□□□□ -0.39
TRIM59-207ENST00000496222 MMAAQ8IVH4 418 aaKnown RBP12.64□□□□□ -0.39
TRIM59-207ENST00000496222 SH2D3CQ8N5H7 860 aa12.64□□□□□ -0.39
TRIM59-207ENST00000496222 AADATQ8N5Z0 425 aa12.64□□□□□ -0.39
TRIM59-207ENST00000496222 FOXJ1Q92949 421 aa12.64□□□□□ -0.39
TRIM59-207ENST00000496222 FAM131CQ96AQ9 280 aa12.64□□□□□ -0.39
TRIM59-207ENST00000496222 ORAI3Q9BRQ5 295 aa12.64□□□□□ -0.39
TRIM59-207ENST00000496222 CNPY3Q9BT09 278 aa12.64□□□□□ -0.39
TRIM59-207ENST00000496222 EDEM2Q9BV94 578 aa12.64□□□□□ -0.39
TRIM59-207ENST00000496222 ZYG11BQ9C0D3 744 aa12.64□□□□□ -0.39
TRIM59-207ENST00000496222 ISCUQ9H1K1 167 aa12.64□□□□□ -0.39
TRIM59-207ENST00000496222 PCED1AQ9H1Q7 454 aa12.64□□□□□ -0.39
TRIM59-207ENST00000496222 PABPC3Q9H361 631 aaKnown RBP12.64□□□□□ -0.39
TRIM59-207ENST00000496222 C6orf106Q9H6K1 298 aaPredicted RBP12.64□□□□□ -0.39
TRIM59-207ENST00000496222 FSCN3Q9NQT6 498 aa12.64□□□□□ -0.39
TRIM59-207ENST00000496222 IFNKQ9P0W0 207 aa12.64□□□□□ -0.39
TRIM59-207ENST00000496222 VPS51Q9UID3 782 aa12.64□□□□□ -0.39
TRIM59-207ENST00000496222 VPS28Q9UK41 221 aa12.64□□□□□ -0.39
TRIM59-207ENST00000496222 CAPN11Q9UMQ6 739 aa12.64□□□□□ -0.39
TRIM59-207ENST00000496222 SLCO1B1Q9Y6L6 691 aa12.64□□□□□ -0.39
TRIM59-207ENST00000496222 NCOR2Q9Y618 2525 aa12.64□□□□□ -0.39
TRIM59-207ENST00000496222 ASCC3Q8N3C0 2202 aaKnown RBP12.64□□□□□ -0.39
TRIM59-207ENST00000496222 MED19A0JLT2 244 aaPredicted RBP12.63□□□□□ -0.39
TRIM59-207ENST00000496222 TMEM191CA6NGB0 347 aa12.63□□□□□ -0.39
TRIM59-207ENST00000496222 K7ERQ8 282 aa12.63□□□□□ -0.39
TRIM59-207ENST00000496222 MID1O15344 667 aa12.63□□□□□ -0.39
TRIM59-207ENST00000496222 ATMINO43313 823 aaPredicted RBP12.63□□□□□ -0.39
TRIM59-207ENST00000496222 SMAD6O43541 496 aaKnown RBP12.63□□□□□ -0.39
TRIM59-207ENST00000496222 LRIG2O94898 1065 aa12.63□□□□□ -0.39
TRIM59-207ENST00000496222 DNTTP04053 509 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms