RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, human

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS52-222	ENST00000495981	NKAPL	Q5M9Q1	402 aa		4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	PPP4R3A	Q6IN85	833 aa		4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	MOXD1	Q6UVY6	613 aa		4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	PARM1	Q6UWI2	310 aa		4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	RPTN	Q6XPR3	784 aa		4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	PDZD4	Q76G19	769 aa	Predicted RBP	4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	TRMT1L	Q7Z2T5	733 aa	Known RBP	4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	ZNF410	Q86VK4	478 aa		4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	PPP1R3B	Q86XI6	285 aa		4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	ZNF280B	Q86YH2	543 aa		4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	SYTL1	Q8IYJ3	562 aa		4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	VPS52	Q8N1B4	723 aa		4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	SH2D3C	Q8N5H7	860 aa		4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	CCDC33	Q8N5R6	958 aa		4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	DTX3	Q8N9I9	347 aa		4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	ZNF527	Q8NB42	609 aa		4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	RNF169	Q8NCN4	708 aa		4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	CCDC148	Q8NFR7	591 aa		4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	CMAS	Q8NFW8	434 aa	Predicted RBP	4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	MAML1	Q92585	1016 aa		4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	ZNF707	Q96C28	371 aa	Predicted RBP	4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	NLRP4	Q96MN2	994 aa		4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	SH2D3A	Q9BRG2	576 aa		4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	TEKT3	Q9BXF9	490 aa		4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	DHX33	Q9H6R0	707 aa	Known RBP	4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	MINDY3	Q9H8M7	445 aa		4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	CNTD2	Q9H8S5	307 aa		4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	PNPLA8	Q9NP80	782 aa		4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	KCNMB3	Q9NPA1	279 aa		4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	LTB4R2	Q9NPC1	389 aa		4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	ITM2C	Q9NQX7	267 aa		4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	TDP1	Q9NUW8	608 aa		4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	DACT1	Q9NYF0	836 aa		4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	PDP2	Q9P2J9	529 aa		4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	MYO1A	Q9UBC5	1043 aa		4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	SNX14	Q9Y5W7	946 aa		4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	CLUH	O75153	1309 aa		4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	ZFHX3	Q15911	3703 aa		4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	MGA	Q8IWI9	3026 aa		4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	PRSS47	A8MTI9	375 aa		4.63	□□□□□ -1.67
VPS52-222	ENST00000495981	FFAR2	O15552	330 aa		4.63	□□□□□ -1.67
VPS52-222	ENST00000495981	AKR1B10	O60218	316 aa		4.63	□□□□□ -1.67
VPS52-222	ENST00000495981	NRP2	O60462	931 aa		4.63	□□□□□ -1.67
VPS52-222	ENST00000495981	TSPAN1	O60635	241 aa		4.63	□□□□□ -1.67
VPS52-222	ENST00000495981	ZNF623	O75123	536 aa		4.63	□□□□□ -1.67
VPS52-222	ENST00000495981	KRT38	O76015	456 aa		4.63	□□□□□ -1.67
VPS52-222	ENST00000495981	DDHD2	O94830	711 aa		4.63	□□□□□ -1.67
VPS52-222	ENST00000495981	PYGL	P06737	847 aa		4.63	□□□□□ -1.67
VPS52-222	ENST00000495981	CNP	P09543	421 aa	Known RBP	4.63	□□□□□ -1.67
VPS52-222	ENST00000495981	LAMP2	P13473	410 aa		4.63	□□□□□ -1.67
VPS52-222	ENST00000495981	BRAF	P15056	766 aa		4.63	□□□□□ -1.67
VPS52-222	ENST00000495981	TNFAIP3	P21580	790 aa		4.63	□□□□□ -1.67
VPS52-222	ENST00000495981	TMOD1	P28289	359 aa		4.63	□□□□□ -1.67
VPS52-222	ENST00000495981	HOXA11	P31270	313 aa	Predicted RBP	4.63	□□□□□ -1.67
VPS52-222	ENST00000495981	MAPK9	P45984	424 aa		4.63	□□□□□ -1.67
VPS52-222	ENST00000495981	SATB1	Q01826	763 aa		4.63	□□□□□ -1.67
VPS52-222	ENST00000495981	KRT17	Q04695	432 aa		4.63	□□□□□ -1.67
VPS52-222	ENST00000495981	PPP2R5C	Q13362	524 aa		4.63	□□□□□ -1.67
VPS52-222	ENST00000495981	ADAM9	Q13443	819 aa		4.63	□□□□□ -1.67
VPS52-222	ENST00000495981	DOC2B	Q14184	412 aa		4.63	□□□□□ -1.67
VPS52-222	ENST00000495981	KRT32	Q14532	448 aa		4.63	□□□□□ -1.67
VPS52-222	ENST00000495981	MLF2	Q15773	248 aa	Predicted RBP	4.63	□□□□□ -1.67
VPS52-222	ENST00000495981	SKIDA1	Q1XH10	827 aa		4.63	□□□□□ -1.67
VPS52-222	ENST00000495981	AASDH	Q4L235	1098 aa	Predicted RBP	4.63	□□□□□ -1.67
VPS52-222	ENST00000495981	XKR3	Q5GH77	459 aa		4.63	□□□□□ -1.67
VPS52-222	ENST00000495981	C3orf38	Q5JPI3	329 aa		4.63	□□□□□ -1.67
VPS52-222	ENST00000495981	PHF19	Q5T6S3	580 aa		4.63	□□□□□ -1.67
VPS52-222	ENST00000495981	TWF2	Q6IBS0	349 aa	Known RBP	4.63	□□□□□ -1.67
VPS52-222	ENST00000495981	GLB1L	Q6UWU2	654 aa		4.63	□□□□□ -1.67
VPS52-222	ENST00000495981	SYNE3	Q6ZMZ3	975 aa		4.63	□□□□□ -1.67
VPS52-222	ENST00000495981	C15orf39	Q6ZRI6	1047 aa		4.63	□□□□□ -1.67
VPS52-222	ENST00000495981		Q6ZUG5	572 aa		4.63	□□□□□ -1.67
VPS52-222	ENST00000495981	FAM90A1	Q86YD7	464 aa		4.63	□□□□□ -1.67
VPS52-222	ENST00000495981	LILRA3	Q8N6C8	439 aa	Predicted RBP	4.63	□□□□□ -1.67
VPS52-222	ENST00000495981	PIK3C3	Q8NEB9	887 aa		4.63	□□□□□ -1.67
VPS52-222	ENST00000495981	PPHLN1	Q8NEY8	458 aa	Known RBP	4.63	□□□□□ -1.67
VPS52-222	ENST00000495981	TBCK	Q8TEA7	893 aa		4.63	□□□□□ -1.67
VPS52-222	ENST00000495981	CCDC12	Q8WUD4	166 aa	Predicted RBP	4.63	□□□□□ -1.67
VPS52-222	ENST00000495981	SKA1	Q96BD8	255 aa		4.63	□□□□□ -1.67
VPS52-222	ENST00000495981	MTFMT	Q96DP5	389 aa	Known RBP	4.63	□□□□□ -1.67
VPS52-222	ENST00000495981	LRIG1	Q96JA1	1093 aa		4.63	□□□□□ -1.67
VPS52-222	ENST00000495981	JAKMIP1	Q96N16	626 aa	Known RBP	4.63	□□□□□ -1.67
VPS52-222	ENST00000495981	KLHL5	Q96PQ7	755 aa		4.63	□□□□□ -1.67
VPS52-222	ENST00000495981	SYT3	Q9BQG1	590 aa		4.63	□□□□□ -1.67
VPS52-222	ENST00000495981	SLC26A6	Q9BXS9	759 aa		4.63	□□□□□ -1.67
VPS52-222	ENST00000495981	STK33	Q9BYT3	514 aa		4.63	□□□□□ -1.67
VPS52-222	ENST00000495981	DPH1	Q9BZG8	443 aa		4.63	□□□□□ -1.67
VPS52-222	ENST00000495981	MAGEH1	Q9H213	219 aa		4.63	□□□□□ -1.67
VPS52-222	ENST00000495981	ARRDC1-AS1	Q9H2J1	176 aa		4.63	□□□□□ -1.67
VPS52-222	ENST00000495981	C6orf50	Q9HD87	102 aa		4.63	□□□□□ -1.67
VPS52-222	ENST00000495981	WDR6	Q9NNW5	1121 aa	Known RBP	4.63	□□□□□ -1.67
VPS52-222	ENST00000495981	XPNPEP1	Q9NQW7	623 aa		4.63	□□□□□ -1.67
VPS52-222	ENST00000495981	CALCOCO1	Q9P1Z2	691 aa		4.63	□□□□□ -1.67
VPS52-222	ENST00000495981	ANKFY1	Q9P2R3	1169 aa		4.63	□□□□□ -1.67
VPS52-222	ENST00000495981	GPR160	Q9UJ42	338 aa		4.63	□□□□□ -1.67
VPS52-222	ENST00000495981	ADAMTS6	Q9UKP5	1117 aa		4.63	□□□□□ -1.67
VPS52-222	ENST00000495981	PCDHB2	Q9Y5E7	798 aa		4.63	□□□□□ -1.67
VPS52-222	ENST00000495981	URB1	O60287	2271 aa	Known RBP	4.63	□□□□□ -1.67
VPS52-222	ENST00000495981	STK36	Q9NRP7	1315 aa		4.63	□□□□□ -1.67

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