RNA–Protein interactions for RNA: ENST00000495955.5

GAPVD1-219, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 5,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-219ENST00000495955 TTC7BQ86TV6 843 aa9.66□□□□□ -0.86
GAPVD1-219ENST00000495955 CMTM8Q8IZV2 173 aa9.66□□□□□ -0.86
GAPVD1-219ENST00000495955 SMOC2Q9H3U7 446 aa9.66□□□□□ -0.86
GAPVD1-219ENST00000495955 PIGVQ9NUD9 493 aa9.66□□□□□ -0.86
GAPVD1-219ENST00000495955 ZDHHC7Q9NXF8 308 aa9.66□□□□□ -0.86
GAPVD1-219ENST00000495955 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.66□□□□□ -0.86
GAPVD1-219ENST00000495955 AGO1Q9UL18 857 aaKnown RBP9.66□□□□□ -0.86
GAPVD1-219ENST00000495955 PLAAQ9Y263 795 aa9.66□□□□□ -0.86
GAPVD1-219ENST00000495955 ADAM12O43184 909 aa9.66□□□□□ -0.86
GAPVD1-219ENST00000495955 SNX2O60749 519 aa9.66□□□□□ -0.86
GAPVD1-219ENST00000495955 L1CAMP32004 1257 aa9.66□□□□□ -0.86
GAPVD1-219ENST00000495955 NKX3-2P78367 333 aa9.66□□□□□ -0.86
GAPVD1-219ENST00000495955 POU6F1Q14863 301 aa9.66□□□□□ -0.86
GAPVD1-219ENST00000495955 FAM46CQ5VWP2 391 aa9.66□□□□□ -0.86
GAPVD1-219ENST00000495955 PDCD7Q8N8D1 485 aaKnown RBP9.66□□□□□ -0.86
GAPVD1-219ENST00000495955 OR7D4Q8NG98 312 aa9.66□□□□□ -0.86
GAPVD1-219ENST00000495955 CALML6Q8TD86 181 aa9.66□□□□□ -0.86
GAPVD1-219ENST00000495955 SH3KBP1Q96B97 665 aa9.66□□□□□ -0.86
GAPVD1-219ENST00000495955 HCFC1R1Q9NWW0 138 aa9.66□□□□□ -0.86
GAPVD1-219ENST00000495955 GNA12Q03113 381 aa9.66□□□□□ -0.86
GAPVD1-219ENST00000495955 ALS2CLQ60I27 953 aa9.66□□□□□ -0.86
GAPVD1-219ENST00000495955 FAM171BQ6P995 826 aa9.66□□□□□ -0.86
GAPVD1-219ENST00000495955 USP45Q70EL2 814 aa9.66□□□□□ -0.86
GAPVD1-219ENST00000495955 IRF7Q92985 503 aa9.66□□□□□ -0.86
GAPVD1-219ENST00000495955 SEMA3CQ99985 751 aa9.66□□□□□ -0.86
GAPVD1-219ENST00000495955 TBL1YQ9BQ87 522 aa9.66□□□□□ -0.86
GAPVD1-219ENST00000495955 SCNN1AP37088 669 aa9.65□□□□□ -0.86
GAPVD1-219ENST00000495955 CXorf40AQ8TE69 158 aa9.65□□□□□ -0.86
GAPVD1-219ENST00000495955 ZBP1Q9H171 429 aa9.65□□□□□ -0.86
GAPVD1-219ENST00000495955 CWH43Q9H720 699 aa9.65□□□□□ -0.86
GAPVD1-219ENST00000495955 RPS6KL1Q9Y6S9 549 aa9.65□□□□□ -0.86
GAPVD1-219ENST00000495955 ZNF840PA6NDX5 716 aa9.65□□□□□ -0.86
GAPVD1-219ENST00000495955 LCA5LO95447 670 aa9.65□□□□□ -0.86
GAPVD1-219ENST00000495955 MAPK8P45983 427 aa9.65□□□□□ -0.86
GAPVD1-219ENST00000495955 USP46P62068 366 aa9.65□□□□□ -0.86
GAPVD1-219ENST00000495955 PDAP1Q13442 181 aaKnown RBP9.65□□□□□ -0.86
GAPVD1-219ENST00000495955 DPYSL3Q14195 570 aa9.65□□□□□ -0.86
GAPVD1-219ENST00000495955 PDGFRLQ15198 375 aa9.65□□□□□ -0.86
GAPVD1-219ENST00000495955 C2orf27AQ580R0 203 aa9.65□□□□□ -0.86
GAPVD1-219ENST00000495955 ANKRD20A2Q5SQ80 823 aa9.65□□□□□ -0.86
GAPVD1-219ENST00000495955 ANKRD20A1Q5TYW2 823 aa9.65□□□□□ -0.86
GAPVD1-219ENST00000495955 ANKRD20A3Q5VUR7 823 aa9.65□□□□□ -0.86
GAPVD1-219ENST00000495955 DDX1Q92499 740 aaKnown RBP9.65□□□□□ -0.86
GAPVD1-219ENST00000495955 HDAC11Q96DB2 347 aa9.65□□□□□ -0.86
GAPVD1-219ENST00000495955 MRPL38Q96DV4 380 aaKnown RBP9.65□□□□□ -0.86
GAPVD1-219ENST00000495955 ELMO2Q96JJ3 720 aa9.65□□□□□ -0.86
GAPVD1-219ENST00000495955 EGFL8Q99944 293 aa9.65□□□□□ -0.86
GAPVD1-219ENST00000495955 PCDH9Q9HC56 1237 aa9.65□□□□□ -0.86
GAPVD1-219ENST00000495955 GREB1LQ9C091 1923 aaPredicted RBP9.65□□□□□ -0.86
GAPVD1-219ENST00000495955 CCDC151A5D8V7 595 aa9.65□□□□□ -0.86
GAPVD1-219ENST00000495955 SDR42E2A6NKP2 422 aa9.65□□□□□ -0.86
GAPVD1-219ENST00000495955 H3BNC9 293 aa9.65□□□□□ -0.86
GAPVD1-219ENST00000495955 SEC24AO95486 1093 aa9.65□□□□□ -0.86
GAPVD1-219ENST00000495955 STAMBPO95630 424 aa9.65□□□□□ -0.86
GAPVD1-219ENST00000495955 SYF2O95926 243 aaKnown RBP9.65□□□□□ -0.86
GAPVD1-219ENST00000495955 CD48P09326 243 aa9.65□□□□□ -0.86
GAPVD1-219ENST00000495955 CEP68Q76N32 757 aa9.65□□□□□ -0.86
GAPVD1-219ENST00000495955 RD3Q7Z3Z2 195 aa9.65□□□□□ -0.86
GAPVD1-219ENST00000495955 GLT6D1Q7Z4J2 308 aa9.65□□□□□ -0.86
GAPVD1-219ENST00000495955 NOA1Q8NC60 698 aaKnown RBP9.65□□□□□ -0.86
GAPVD1-219ENST00000495955 HLA-CQ95604 372 aa9.65□□□□□ -0.86
GAPVD1-219ENST00000495955 RPL10LQ96L21 214 aaKnown RBP9.65□□□□□ -0.86
GAPVD1-219ENST00000495955 MIR1-1HGQ9H1L0 117 aa9.65□□□□□ -0.86
GAPVD1-219ENST00000495955 GOLGA8KD6RF30 607 aa9.65□□□□□ -0.87
GAPVD1-219ENST00000495955 LOC285556D6RIA3 1793 aa9.65□□□□□ -0.87
GAPVD1-219ENST00000495955 ITGALP20701 1170 aa9.65□□□□□ -0.87
GAPVD1-219ENST00000495955 CSE1LP55060 971 aaKnown RBP9.65□□□□□ -0.87
GAPVD1-219ENST00000495955 EIF3BP55884 814 aaKnown RBP9.65□□□□□ -0.87
GAPVD1-219ENST00000495955 PFKPQ01813 784 aa9.65□□□□□ -0.87
GAPVD1-219ENST00000495955 RNF187Q5TA31 235 aaPredicted RBP9.65□□□□□ -0.87
GAPVD1-219ENST00000495955 SLC8B1Q6J4K2 584 aa9.65□□□□□ -0.87
GAPVD1-219ENST00000495955 C3orf62Q6ZUJ4 267 aa9.65□□□□□ -0.87
GAPVD1-219ENST00000495955 PSTKQ8IV42 348 aaKnown RBP9.65□□□□□ -0.87
GAPVD1-219ENST00000495955 CFAP61Q8NHU2 1237 aa9.65□□□□□ -0.87
GAPVD1-219ENST00000495955 N4BP2L2Q92802 583 aaPredicted RBP9.65□□□□□ -0.87
GAPVD1-219ENST00000495955 SMARCD2Q92925 531 aa9.65□□□□□ -0.87
GAPVD1-219ENST00000495955 SHDQ96IW2 340 aa9.65□□□□□ -0.87
GAPVD1-219ENST00000495955 HAPLN3Q96S86 360 aa9.65□□□□□ -0.87
GAPVD1-219ENST00000495955 TNKS2Q9H2K2 1166 aa9.65□□□□□ -0.87
GAPVD1-219ENST00000495955 OTOFQ9HC10 1997 aa9.65□□□□□ -0.87
GAPVD1-219ENST00000495955 SHOC2Q9UQ13 582 aa9.65□□□□□ -0.87
GAPVD1-219ENST00000495955 MFSD11O43934 449 aa9.64□□□□□ -0.87
GAPVD1-219ENST00000495955 USP12O75317 370 aa9.64□□□□□ -0.87
GAPVD1-219ENST00000495955 CHRM3P20309 590 aa9.64□□□□□ -0.87
GAPVD1-219ENST00000495955 ITGB8P26012 769 aa9.64□□□□□ -0.87
GAPVD1-219ENST00000495955 PSMB4P28070 264 aa9.64□□□□□ -0.87
GAPVD1-219ENST00000495955 HTR7P34969 479 aa9.64□□□□□ -0.87
GAPVD1-219ENST00000495955 IRS1P35568 1242 aa9.64□□□□□ -0.87
GAPVD1-219ENST00000495955 MAGEA4P43358 317 aa9.64□□□□□ -0.87
GAPVD1-219ENST00000495955 MXRA7P84157 204 aa9.64□□□□□ -0.87
GAPVD1-219ENST00000495955 ADCY2Q08462 1091 aa9.64□□□□□ -0.87
GAPVD1-219ENST00000495955 HMCESQ96FZ2 354 aa9.64□□□□□ -0.87
GAPVD1-219ENST00000495955 HES6Q96HZ4 224 aa9.64□□□□□ -0.87
GAPVD1-219ENST00000495955 ADAM33Q9BZ11 813 aa9.64□□□□□ -0.87
GAPVD1-219ENST00000495955 FRMD8Q9BZ67 464 aaPredicted RBP9.64□□□□□ -0.87
GAPVD1-219ENST00000495955 RCOR3Q9P2K3 495 aaPredicted RBP9.64□□□□□ -0.87
GAPVD1-219ENST00000495955 LIMD1Q9UGP4 676 aa9.64□□□□□ -0.87
GAPVD1-219ENST00000495955 RAB23Q9ULC3 237 aa9.64□□□□□ -0.87
GAPVD1-219ENST00000495955 TARSL2A2RTX5 802 aaKnown RBP9.64□□□□□ -0.87
GAPVD1-219ENST00000495955 HEPACAM2A8MVW5 462 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms