RNA–Protein interactions for RNA: ENST00000495327.1

RBM28-208, Transcript of RNA binding motif protein 28, human

TSL 2

Gene RBM28, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM28-208	ENST00000495327	PTPRN2	Q92932	1015 aa		13.7	□□□□□ -0.22
RBM28-208	ENST00000495327	NTAN1	Q96AB6	310 aa		13.7	□□□□□ -0.22
RBM28-208	ENST00000495327	VCPIP1	Q96JH7	1222 aa		13.7	□□□□□ -0.22
RBM28-208	ENST00000495327	PABPC3	Q9H361	631 aa	Known RBP	13.7	□□□□□ -0.22
RBM28-208	ENST00000495327	MTG2	Q9H4K7	406 aa		13.7	□□□□□ -0.22
RBM28-208	ENST00000495327	RETREG1	Q9H6L5	497 aa		13.7	□□□□□ -0.22
RBM28-208	ENST00000495327	AIPL1	Q9NZN9	384 aa		13.7	□□□□□ -0.22
RBM28-208	ENST00000495327	PPARGC1A	Q9UBK2	798 aa	Known RBP	13.7	□□□□□ -0.22
RBM28-208	ENST00000495327	SLCO3A1	Q9UIG8	710 aa		13.7	□□□□□ -0.22
RBM28-208	ENST00000495327	VPS28	Q9UK41	221 aa		13.7	□□□□□ -0.22
RBM28-208	ENST00000495327	SLC6A14	Q9UN76	642 aa		13.7	□□□□□ -0.22
RBM28-208	ENST00000495327	SNX10	Q9Y5X0	201 aa		13.7	□□□□□ -0.22
RBM28-208	ENST00000495327	NCOR2	Q9Y618	2525 aa		13.69	□□□□□ -0.22
RBM28-208	ENST00000495327	MED19	A0JLT2	244 aa	Predicted RBP	13.69	□□□□□ -0.22
RBM28-208	ENST00000495327	DCDC2B	A2VCK2	349 aa		13.69	□□□□□ -0.22
RBM28-208	ENST00000495327	METTL12	A8MUP2	240 aa		13.69	□□□□□ -0.22
RBM28-208	ENST00000495327	CDX4	O14627	284 aa	Predicted RBP	13.69	□□□□□ -0.22
RBM28-208	ENST00000495327	ATP9B	O43861	1147 aa		13.69	□□□□□ -0.22
RBM28-208	ENST00000495327	GJB6	O95452	261 aa		13.69	□□□□□ -0.22
RBM28-208	ENST00000495327	ADH1B	P00325	375 aa		13.69	□□□□□ -0.22
RBM28-208	ENST00000495327	CFI	P05156	583 aa		13.69	□□□□□ -0.22
RBM28-208	ENST00000495327	ENG	P17813	658 aa		13.69	□□□□□ -0.22
RBM28-208	ENST00000495327	ACSL1	P33121	698 aa		13.69	□□□□□ -0.22
RBM28-208	ENST00000495327	RFC1	P35251	1148 aa	Predicted RBP	13.69	□□□□□ -0.22
RBM28-208	ENST00000495327	ADRA1B	P35368	520 aa		13.69	□□□□□ -0.22
RBM28-208	ENST00000495327	PBX1	P40424	430 aa		13.69	□□□□□ -0.22
RBM28-208	ENST00000495327	HDAC4	P56524	1084 aa		13.69	□□□□□ -0.22
RBM28-208	ENST00000495327	FANCC	Q00597	558 aa		13.69	□□□□□ -0.22
RBM28-208	ENST00000495327	SFSWAP	Q12872	951 aa	Known RBP	13.69	□□□□□ -0.22
RBM28-208	ENST00000495327	ASIC2	Q16515	512 aa		13.69	□□□□□ -0.22
RBM28-208	ENST00000495327	SKOR2	Q2VWA4	1001 aa	Predicted RBP	13.69	□□□□□ -0.22
RBM28-208	ENST00000495327	ZSCAN23	Q3MJ62	389 aa		13.69	□□□□□ -0.22
RBM28-208	ENST00000495327	RAB6C	Q53S08	254 aa		13.69	□□□□□ -0.22
RBM28-208	ENST00000495327	C6orf118	Q5T5N4	469 aa		13.69	□□□□□ -0.22
RBM28-208	ENST00000495327	SH3PXD2A	Q5TCZ1	1133 aa		13.69	□□□□□ -0.22
RBM28-208	ENST00000495327	DCAF12L1	Q5VU92	463 aa		13.69	□□□□□ -0.22
RBM28-208	ENST00000495327	E4F1	Q66K89	784 aa	Predicted RBP	13.69	□□□□□ -0.22
RBM28-208	ENST00000495327	ACAD10	Q6JQN1	1059 aa		13.69	□□□□□ -0.22
RBM28-208	ENST00000495327	WDR59	Q6PJI9	974 aa		13.69	□□□□□ -0.22
RBM28-208	ENST00000495327	ZNF783	Q6ZMS7	281 aa		13.69	□□□□□ -0.22
RBM28-208	ENST00000495327	PHLDB2	Q86SQ0	1253 aa		13.69	□□□□□ -0.22
RBM28-208	ENST00000495327	RGL4	Q8IZJ4	473 aa		13.69	□□□□□ -0.22
RBM28-208	ENST00000495327	MCOLN2	Q8IZK6	566 aa		13.69	□□□□□ -0.22
RBM28-208	ENST00000495327	DCAF4L2	Q8NA75	395 aa		13.69	□□□□□ -0.22
RBM28-208	ENST00000495327	FAM172A	Q8WUF8	416 aa		13.69	□□□□□ -0.22
RBM28-208	ENST00000495327	PSMB7	Q99436	277 aa		13.69	□□□□□ -0.22
RBM28-208	ENST00000495327	C2orf49	Q9BVC5	232 aa	Predicted RBP	13.69	□□□□□ -0.22
RBM28-208	ENST00000495327	ZYG11B	Q9C0D3	744 aa		13.69	□□□□□ -0.22
RBM28-208	ENST00000495327	BTBD1	Q9H0C5	482 aa		13.69	□□□□□ -0.22
RBM28-208	ENST00000495327	RAB6C	Q9H0N0	254 aa		13.69	□□□□□ -0.22
RBM28-208	ENST00000495327	MUC3B	Q9H195	1237 aa		13.69	□□□□□ -0.22
RBM28-208	ENST00000495327	OSBPL2	Q9H1P3	480 aa		13.69	□□□□□ -0.22
RBM28-208	ENST00000495327	SGK2	Q9HBY8	427 aa		13.69	□□□□□ -0.22
RBM28-208	ENST00000495327	ADAMTS1	Q9UHI8	967 aa		13.69	□□□□□ -0.22
RBM28-208	ENST00000495327	FZD4	Q9ULV1	537 aa		13.69	□□□□□ -0.22
RBM28-208	ENST00000495327	HS3ST2	Q9Y278	367 aa		13.69	□□□□□ -0.22
RBM28-208	ENST00000495327	TMEM131	Q92545	1883 aa		13.69	□□□□□ -0.22
RBM28-208	ENST00000495327	SPTBN2	O15020	2390 aa		13.68	□□□□□ -0.22
RBM28-208	ENST00000495327		A0A1B0GTW7	788 aa		13.68	□□□□□ -0.22
RBM28-208	ENST00000495327	ILVBL	A1L0T0	632 aa		13.68	□□□□□ -0.22
RBM28-208	ENST00000495327	ANKRD62	A6NC57	917 aa		13.68	□□□□□ -0.22
RBM28-208	ENST00000495327	C4orf47	A7E2U8	309 aa		13.68	□□□□□ -0.22
RBM28-208	ENST00000495327	GOLGA6L19	H0YKK7	550 aa		13.68	□□□□□ -0.22
RBM28-208	ENST00000495327	ALOX15B	O15296	676 aa		13.68	□□□□□ -0.22
RBM28-208	ENST00000495327	MID1	O15344	667 aa		13.68	□□□□□ -0.22
RBM28-208	ENST00000495327	CCP110	O43303	1012 aa		13.68	□□□□□ -0.22
RBM28-208	ENST00000495327	SEMA4F	O95754	770 aa		13.68	□□□□□ -0.22
RBM28-208	ENST00000495327	GNS	P15586	552 aa		13.68	□□□□□ -0.22
RBM28-208	ENST00000495327	TNFAIP3	P21580	790 aa		13.68	□□□□□ -0.22
RBM28-208	ENST00000495327	RRM1	P23921	792 aa		13.68	□□□□□ -0.22
RBM28-208	ENST00000495327	ZNF143	P52747	638 aa	Predicted RBP	13.68	□□□□□ -0.22
RBM28-208	ENST00000495327	KRT83	P78385	493 aa		13.68	□□□□□ -0.22
RBM28-208	ENST00000495327	GFPT1	Q06210	699 aa	Predicted RBP	13.68	□□□□□ -0.22
RBM28-208	ENST00000495327	SCAP	Q12770	1279 aa		13.68	□□□□□ -0.22
RBM28-208	ENST00000495327	SFMBT2	Q5VUG0	894 aa		13.68	□□□□□ -0.22
RBM28-208	ENST00000495327	DAB2IP	Q5VWQ8	1189 aa		13.68	□□□□□ -0.22
RBM28-208	ENST00000495327	TFAP2D	Q7Z6R9	452 aa		13.68	□□□□□ -0.22
RBM28-208	ENST00000495327	FAM124A	Q86V42	546 aa		13.68	□□□□□ -0.22
RBM28-208	ENST00000495327	SH2D3C	Q8N5H7	860 aa		13.68	□□□□□ -0.22
RBM28-208	ENST00000495327	IQCD	Q96DY2	449 aa		13.68	□□□□□ -0.22
RBM28-208	ENST00000495327	MCEE	Q96PE7	176 aa		13.68	□□□□□ -0.22
RBM28-208	ENST00000495327	FAM129B	Q96TA1	746 aa		13.68	□□□□□ -0.22
RBM28-208	ENST00000495327	MPP6	Q9NZW5	540 aa		13.68	□□□□□ -0.22
RBM28-208	ENST00000495327	OR12D3	Q9UGF7	316 aa		13.68	□□□□□ -0.22
RBM28-208	ENST00000495327	NEU3	Q9UQ49	428 aa		13.68	□□□□□ -0.22
RBM28-208	ENST00000495327	NCKAP1	Q9Y2A7	1128 aa		13.68	□□□□□ -0.22
RBM28-208	ENST00000495327	CXorf51A	A0A1B0GTR3	108 aa		13.67	□□□□□ -0.22
RBM28-208	ENST00000495327		A0A1W2PQJ5	194 aa		13.67	□□□□□ -0.22
RBM28-208	ENST00000495327	SRGAP2	O75044	1071 aa		13.67	□□□□□ -0.22
RBM28-208	ENST00000495327	GZMA	P12544	262 aa		13.67	□□□□□ -0.22
RBM28-208	ENST00000495327	SRC	P12931	536 aa		13.67	□□□□□ -0.22
RBM28-208	ENST00000495327	VAV1	P15498	845 aa		13.67	□□□□□ -0.22
RBM28-208	ENST00000495327	C5AR1	P21730	350 aa		13.67	□□□□□ -0.22
RBM28-208	ENST00000495327	OR1E1	P30953	314 aa		13.67	□□□□□ -0.22
RBM28-208	ENST00000495327	PSMD8	P48556	350 aa		13.67	□□□□□ -0.22
RBM28-208	ENST00000495327	NUMB	P49757	651 aa		13.67	□□□□□ -0.22
RBM28-208	ENST00000495327	CLCN6	P51797	869 aa		13.67	□□□□□ -0.22
RBM28-208	ENST00000495327	AIF1	P55008	147 aa		13.67	□□□□□ -0.22
RBM28-208	ENST00000495327	PPM1J	Q5JR12	505 aa		13.67	□□□□□ -0.22
RBM28-208	ENST00000495327	LRSAM1	Q6UWE0	723 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms