RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 SIM2Q14190 667 aaPredicted RBP17.58■□□□□ 0.4
SNX17-209ENST00000494893 SETD3Q86TU7 594 aaPredicted RBP17.58■□□□□ 0.4
SNX17-209ENST00000494893 KBTBD6Q86V97 674 aa17.58■□□□□ 0.4
SNX17-209ENST00000494893 FAM160A2Q8N612 972 aaPredicted RBP17.58■□□□□ 0.4
SNX17-209ENST00000494893 OR7D4Q8NG98 312 aa17.58■□□□□ 0.4
SNX17-209ENST00000494893 SNRNP25Q9BV90 132 aaKnown RBP17.58■□□□□ 0.4
SNX17-209ENST00000494893 PRSS16Q9NQE7 514 aa17.58■□□□□ 0.4
SNX17-209ENST00000494893 BCCIPQ9P287 314 aaKnown RBP eCLIP17.58■□□□□ 0.4
SNX17-209ENST00000494893 PCSK1NQ9UHG2 260 aa17.58■□□□□ 0.4
SNX17-209ENST00000494893 MBD1Q9UIS9 605 aaPredicted RBP17.58■□□□□ 0.4
SNX17-209ENST00000494893 ADGRG1Q9Y653 693 aa17.58■□□□□ 0.4
SNX17-209ENST00000494893 CKAP5Q14008 2032 aa17.58■□□□□ 0.4
SNX17-209ENST00000494893 SNAP91O60641 907 aa17.57■□□□□ 0.4
SNX17-209ENST00000494893 IPO7O95373 1038 aaKnown RBP17.57■□□□□ 0.4
SNX17-209ENST00000494893 MOCS3O95396 460 aa17.57■□□□□ 0.4
SNX17-209ENST00000494893 SRPRAP08240 638 aaKnown RBP17.57■□□□□ 0.4
SNX17-209ENST00000494893 RHOQP17081 205 aa17.57■□□□□ 0.4
SNX17-209ENST00000494893 GLDCP23378 1020 aa17.57■□□□□ 0.4
SNX17-209ENST00000494893 AIF1P55008 147 aa17.57■□□□□ 0.4
SNX17-209ENST00000494893 OXCT1P55809 520 aa17.57■□□□□ 0.4
SNX17-209ENST00000494893 KRT83P78385 493 aa17.57■□□□□ 0.4
SNX17-209ENST00000494893 STARD3Q14849 445 aa17.57■□□□□ 0.4
SNX17-209ENST00000494893 SPA17Q15506 151 aa17.57■□□□□ 0.4
SNX17-209ENST00000494893 HNRNPA1L2Q32P51 320 aaKnown RBP17.57■□□□□ 0.4
SNX17-209ENST00000494893 EFHC2Q5JST6 749 aa17.57■□□□□ 0.4
SNX17-209ENST00000494893 TXNRD3NBQ6F5E7 133 aa17.57■□□□□ 0.4
SNX17-209ENST00000494893 RWDD4Q6NW29 188 aaKnown RBP17.57■□□□□ 0.4
SNX17-209ENST00000494893 KDM1BQ8NB78 822 aa17.57■□□□□ 0.4
SNX17-209ENST00000494893 TBC1D31Q96DN5 1066 aa17.57■□□□□ 0.4
SNX17-209ENST00000494893 KCTD15Q96SI1 283 aaPredicted RBP17.57■□□□□ 0.4
SNX17-209ENST00000494893 DESI2Q9BSY9 194 aa17.57■□□□□ 0.4
SNX17-209ENST00000494893 DUSP15Q9H1R2 295 aaPredicted RBP17.57■□□□□ 0.4
SNX17-209ENST00000494893 KCND1Q9NSA2 647 aa17.57■□□□□ 0.4
SNX17-209ENST00000494893 TMEM248Q9NWD8 314 aa17.57■□□□□ 0.4
SNX17-209ENST00000494893 ANAPC7Q9UJX3 599 aa17.57■□□□□ 0.4
SNX17-209ENST00000494893 VPS28Q9UK41 221 aa17.57■□□□□ 0.4
SNX17-209ENST00000494893 AP4E1Q9UPM8 1137 aa17.57■□□□□ 0.4
SNX17-209ENST00000494893 REXO2Q9Y3B8 237 aaKnown RBP17.57■□□□□ 0.4
SNX17-209ENST00000494893 PIEZO1Q92508 2521 aa17.57■□□□□ 0.4
SNX17-209ENST00000494893 DOCK4Q8N1I0 1966 aa17.57■□□□□ 0.4
SNX17-209ENST00000494893 ILVBLA1L0T0 632 aa17.56■□□□□ 0.4
SNX17-209ENST00000494893 ZMPSTE24O75844 475 aa17.56■□□□□ 0.4
SNX17-209ENST00000494893 MT-CO1P00395 513 aa17.56■□□□□ 0.4
SNX17-209ENST00000494893 H2AFZP0C0S5 128 aa17.56■□□□□ 0.4
SNX17-209ENST00000494893 CCDC175P0C221 793 aa17.56■□□□□ 0.4
SNX17-209ENST00000494893 TMEM253P0C7T8 217 aa17.56■□□□□ 0.4
SNX17-209ENST00000494893 VAV1P15498 845 aa17.56■□□□□ 0.4
SNX17-209ENST00000494893 OR1E1P30953 314 aa17.56■□□□□ 0.4
SNX17-209ENST00000494893 PCK1P35558 622 aa17.56■□□□□ 0.4
SNX17-209ENST00000494893 E2F5Q15329 346 aa17.56■□□□□ 0.4
SNX17-209ENST00000494893 PLK5Q496M5 336 aa17.56■□□□□ 0.4
SNX17-209ENST00000494893 PRR23BQ6ZRT6 265 aa17.56■□□□□ 0.4
SNX17-209ENST00000494893 H2AFVQ71UI9 128 aa17.56■□□□□ 0.4
SNX17-209ENST00000494893 CEP68Q76N32 757 aa17.56■□□□□ 0.4
SNX17-209ENST00000494893 PGBD3Q8N328 593 aa17.56■□□□□ 0.4
SNX17-209ENST00000494893 NIPA2Q8N8Q9 360 aa17.56■□□□□ 0.4
SNX17-209ENST00000494893 ACRBPQ8NEB7 543 aa17.56■□□□□ 0.4
SNX17-209ENST00000494893 OR2T3Q8NH03 318 aa17.56■□□□□ 0.4
SNX17-209ENST00000494893 ZNF564Q8TBZ8 553 aaPredicted RBP17.56■□□□□ 0.4
SNX17-209ENST00000494893 FRS2Q8WU20 508 aa17.56■□□□□ 0.4
SNX17-209ENST00000494893 MUC3BQ9H195 1237 aa17.56■□□□□ 0.4
SNX17-209ENST00000494893 NOL6Q9H6R4 1146 aaKnown RBP17.56■□□□□ 0.4
SNX17-209ENST00000494893 VPS51Q9UID3 782 aa17.56■□□□□ 0.4
SNX17-209ENST00000494893 PPP2R2CQ9Y2T4 447 aa17.56■□□□□ 0.4
SNX17-209ENST00000494893 OTOGLQ3ZCN5 2332 aa17.55■□□□□ 0.4
SNX17-209ENST00000494893 ZSCAN12O43309 604 aa17.55■□□□□ 0.4
SNX17-209ENST00000494893 CREB3O43889 395 aa17.55■□□□□ 0.4
SNX17-209ENST00000494893 SYNCRIPO60506 623 aaKnown RBP17.55■□□□□ 0.4
SNX17-209ENST00000494893 SIN3BO75182 1162 aa17.55■□□□□ 0.4
SNX17-209ENST00000494893 RNF8O76064 485 aa17.55■□□□□ 0.4
SNX17-209ENST00000494893 ACVRL1P37023 503 aa17.55■□□□□ 0.4
SNX17-209ENST00000494893 VASPP50552 380 aaPredicted RBP17.55■□□□□ 0.4
SNX17-209ENST00000494893 GNA12Q03113 381 aa17.55■□□□□ 0.4
SNX17-209ENST00000494893 USP39Q53GS9 565 aaKnown RBP17.55■□□□□ 0.4
SNX17-209ENST00000494893 C6orf118Q5T5N4 469 aa17.55■□□□□ 0.4
SNX17-209ENST00000494893 ERMARDQ5T6L9 678 aa17.55■□□□□ 0.4
SNX17-209ENST00000494893 C9orf64Q5T6V5 341 aa17.55■□□□□ 0.4
SNX17-209ENST00000494893 KIAA1324Q6UXG2 1013 aaKnown RBP17.55■□□□□ 0.4
SNX17-209ENST00000494893 CACUL1Q86Y37 369 aa17.55■□□□□ 0.4
SNX17-209ENST00000494893 TMPRSS6Q8IU80 811 aa17.55■□□□□ 0.4
SNX17-209ENST00000494893 DCLK2Q8N568 766 aa17.55■□□□□ 0.4
SNX17-209ENST00000494893 DCAF4L2Q8NA75 395 aa17.55■□□□□ 0.4
SNX17-209ENST00000494893 PTPRN2Q92932 1015 aa17.55■□□□□ 0.4
SNX17-209ENST00000494893 ZC3H10Q96K80 434 aaKnown RBP17.55■□□□□ 0.4
SNX17-209ENST00000494893 DHX35Q9H5Z1 703 aaKnown RBP17.55■□□□□ 0.4
SNX17-209ENST00000494893 PRDM16Q9HAZ2 1276 aa17.55■□□□□ 0.4
SNX17-209ENST00000494893 OSGEPQ9NPF4 335 aa17.55■□□□□ 0.4
SNX17-209ENST00000494893 DNAI1Q9UI46 699 aa17.55■□□□□ 0.4
SNX17-209ENST00000494893 USP18Q9UMW8 372 aa17.55■□□□□ 0.4
SNX17-209ENST00000494893 PCDHA13Q9Y5I0 950 aa17.55■□□□□ 0.4
SNX17-209ENST00000494893 IGHV1OR15-9A0A0B4J2B8 117 aa17.54■□□□□ 0.4
SNX17-209ENST00000494893 WASH4PA8MWX3 477 aa17.54■□□□□ 0.4
SNX17-209ENST00000494893 K7ERQ8 282 aa17.54■□□□□ 0.4
SNX17-209ENST00000494893 ATP9BO43861 1147 aa17.54■□□□□ 0.4
SNX17-209ENST00000494893 PRPSAP2O60256 369 aa17.54■□□□□ 0.4
SNX17-209ENST00000494893 CD160O95971 181 aa17.54■□□□□ 0.4
SNX17-209ENST00000494893 MSNP26038 577 aaKnown RBP17.54■□□□□ 0.4
SNX17-209ENST00000494893 EPHB2P29323 1055 aa17.54■□□□□ 0.4
SNX17-209ENST00000494893 MAPKAPK2P49137 400 aa17.54■□□□□ 0.4
SNX17-209ENST00000494893 ST8SIA6P61647 398 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms