RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 TBC1D3FA6NER0 549 aaPredicted RBP9.87□□□□□ -0.83
MSH5-218ENST00000494646 TBC1D3LB9A6J9 549 aa9.87□□□□□ -0.83
MSH5-218ENST00000494646 F8VZ95 297 aa9.87□□□□□ -0.83
MSH5-218ENST00000494646 IGHV4-34P06331 123 aa9.87□□□□□ -0.83
MSH5-218ENST00000494646 TBC1D3HP0C7X1 549 aa9.87□□□□□ -0.83
MSH5-218ENST00000494646 CHRNB2P17787 502 aa9.87□□□□□ -0.83
MSH5-218ENST00000494646 CDK11BP21127 795 aaKnown RBP9.87□□□□□ -0.83
MSH5-218ENST00000494646 CD27P26842 260 aa9.87□□□□□ -0.83
MSH5-218ENST00000494646 CDH5P33151 784 aaPredicted RBP9.87□□□□□ -0.83
MSH5-218ENST00000494646 FLT3P36888 993 aa9.87□□□□□ -0.83
MSH5-218ENST00000494646 CXCR3P49682 368 aa9.87□□□□□ -0.83
MSH5-218ENST00000494646 AFF3P51826 1226 aaKnown RBP9.87□□□□□ -0.83
MSH5-218ENST00000494646 PLK1P53350 603 aa9.87□□□□□ -0.83
MSH5-218ENST00000494646 METAP1P53582 386 aa9.87□□□□□ -0.83
MSH5-218ENST00000494646 COPB1P53618 953 aaKnown RBP9.87□□□□□ -0.83
MSH5-218ENST00000494646 SULT2A1Q06520 285 aa9.87□□□□□ -0.83
MSH5-218ENST00000494646 SLC14A1Q13336 389 aa9.87□□□□□ -0.83
MSH5-218ENST00000494646 DLG2Q15700 870 aa9.87□□□□□ -0.83
MSH5-218ENST00000494646 POM121L1PQ3SYA9 428 aa9.87□□□□□ -0.83
MSH5-218ENST00000494646 RAB6CQ53S08 254 aa9.87□□□□□ -0.83
MSH5-218ENST00000494646 TTC39BQ5VTQ0 682 aaPredicted RBP9.87□□□□□ -0.83
MSH5-218ENST00000494646 CDKAL1Q5VV42 579 aa9.87□□□□□ -0.83
MSH5-218ENST00000494646 NAA35Q5VZE5 725 aa9.87□□□□□ -0.83
MSH5-218ENST00000494646 KIAA0895LQ68EN5 471 aa9.87□□□□□ -0.83
MSH5-218ENST00000494646 TBC1D3GQ6DHY5 549 aa9.87□□□□□ -0.83
MSH5-218ENST00000494646 TBC1D3CQ6IPX1 549 aa9.87□□□□□ -0.83
MSH5-218ENST00000494646 TRNP1Q6NT89 227 aa9.87□□□□□ -0.83
MSH5-218ENST00000494646 NCEH1Q6PIU2 408 aa9.87□□□□□ -0.83
MSH5-218ENST00000494646 LRSAM1Q6UWE0 723 aa9.87□□□□□ -0.83
MSH5-218ENST00000494646 USP30Q70CQ3 517 aa9.87□□□□□ -0.83
MSH5-218ENST00000494646 NAXDQ8IW45 347 aa9.87□□□□□ -0.83
MSH5-218ENST00000494646 TBC1D3Q8IZP1 549 aaPredicted RBP9.87□□□□□ -0.83
MSH5-218ENST00000494646 AADATQ8N5Z0 425 aa9.87□□□□□ -0.83
MSH5-218ENST00000494646 EMC1Q8N766 993 aa9.87□□□□□ -0.83
MSH5-218ENST00000494646 OR14C36Q8NHC7 312 aa9.87□□□□□ -0.83
MSH5-218ENST00000494646 SLC30A5Q8TAD4 765 aa9.87□□□□□ -0.83
MSH5-218ENST00000494646 ALG14Q96F25 216 aa9.87□□□□□ -0.83
MSH5-218ENST00000494646 CFAP57Q96MR6 1250 aa9.87□□□□□ -0.83
MSH5-218ENST00000494646 GBP4Q96PP9 640 aa9.87□□□□□ -0.83
MSH5-218ENST00000494646 PPP1R9BQ96SB3 815 aa9.87□□□□□ -0.83
MSH5-218ENST00000494646 RAB6CQ9H0N0 254 aa9.87□□□□□ -0.83
MSH5-218ENST00000494646 MUC3BQ9H195 1237 aa9.87□□□□□ -0.83
MSH5-218ENST00000494646 GANQ9H2C0 597 aa9.87□□□□□ -0.83
MSH5-218ENST00000494646 TM7SF3Q9NS93 570 aa9.87□□□□□ -0.83
MSH5-218ENST00000494646 ARHGEF38Q9NXL2 777 aa9.87□□□□□ -0.83
MSH5-218ENST00000494646 RRN3Q9NYV6 651 aa9.87□□□□□ -0.83
MSH5-218ENST00000494646 MPP6Q9NZW5 540 aa9.87□□□□□ -0.83
MSH5-218ENST00000494646 SLC25A13Q9UJS0 675 aa9.87□□□□□ -0.83
MSH5-218ENST00000494646 VPS28Q9UK41 221 aa9.87□□□□□ -0.83
MSH5-218ENST00000494646 SARDHQ9UL12 918 aa9.87□□□□□ -0.83
MSH5-218ENST00000494646 STAP1Q9ULZ2 295 aa9.87□□□□□ -0.83
MSH5-218ENST00000494646 SCML1Q9UN30 329 aa9.87□□□□□ -0.83
MSH5-218ENST00000494646 WASF3Q9UPY6 502 aa9.87□□□□□ -0.83
MSH5-218ENST00000494646 ITIH6Q6UXX5 1313 aa9.86□□□□□ -0.83
MSH5-218ENST00000494646 PLXNB3Q9ULL4 1909 aa9.86□□□□□ -0.83
MSH5-218ENST00000494646 ZFHX4Q86UP3 3567 aa9.86□□□□□ -0.83
MSH5-218ENST00000494646 LRRC72A6NJI9 287 aa9.86□□□□□ -0.83
MSH5-218ENST00000494646 GOLGA8CPA6NN73 597 aa9.86□□□□□ -0.83
MSH5-218ENST00000494646 WNT9AO14904 365 aa9.86□□□□□ -0.83
MSH5-218ENST00000494646 EPHB6O15197 1021 aa9.86□□□□□ -0.83
MSH5-218ENST00000494646 SNAP91O60641 907 aa9.86□□□□□ -0.83
MSH5-218ENST00000494646 CLDN11O75508 207 aa9.86□□□□□ -0.83
MSH5-218ENST00000494646 GJB6O95452 261 aa9.86□□□□□ -0.83
MSH5-218ENST00000494646 MT-CO1P00395 513 aa9.86□□□□□ -0.83
MSH5-218ENST00000494646 F9P00740 461 aa9.86□□□□□ -0.83
MSH5-218ENST00000494646 TPM2P07951 284 aa9.86□□□□□ -0.83
MSH5-218ENST00000494646 RHOCP08134 193 aa9.86□□□□□ -0.83
MSH5-218ENST00000494646 C7P10643 843 aa9.86□□□□□ -0.83
MSH5-218ENST00000494646 GOT1P17174 413 aa9.86□□□□□ -0.83
MSH5-218ENST00000494646 CDH4P55283 916 aa9.86□□□□□ -0.83
MSH5-218ENST00000494646 NOMO3P69849 1222 aa9.86□□□□□ -0.83
MSH5-218ENST00000494646 ATP11AP98196 1134 aa9.86□□□□□ -0.83
MSH5-218ENST00000494646 SFSWAPQ12872 951 aaKnown RBP9.86□□□□□ -0.83
MSH5-218ENST00000494646 ARID5BQ14865 1188 aa9.86□□□□□ -0.83
MSH5-218ENST00000494646 TEAD4Q15561 434 aa9.86□□□□□ -0.83
MSH5-218ENST00000494646 CDO1Q16878 200 aa9.86□□□□□ -0.83
MSH5-218ENST00000494646 SLC25A52Q3SY17 297 aa9.86□□□□□ -0.83
MSH5-218ENST00000494646 C5orf22Q49AR2 442 aa9.86□□□□□ -0.83
MSH5-218ENST00000494646 KCNT1Q5JUK3 1230 aa9.86□□□□□ -0.83
MSH5-218ENST00000494646 BRMS1LQ5PSV4 323 aa9.86□□□□□ -0.83
MSH5-218ENST00000494646 FKBP15Q5T1M5 1219 aa9.86□□□□□ -0.83
MSH5-218ENST00000494646 ADAT2Q7Z6V5 191 aaKnown RBP9.86□□□□□ -0.83
MSH5-218ENST00000494646 EPS8L1Q8TE68 723 aa9.86□□□□□ -0.83
MSH5-218ENST00000494646 RHBDD1Q8TEB9 315 aa9.86□□□□□ -0.83
MSH5-218ENST00000494646 FRS2Q8WU20 508 aa9.86□□□□□ -0.83
MSH5-218ENST00000494646 NT5C3BQ969T7 300 aa9.86□□□□□ -0.83
MSH5-218ENST00000494646 SLC6A18Q96N87 628 aa9.86□□□□□ -0.83
MSH5-218ENST00000494646 ORAI3Q9BRQ5 295 aa9.86□□□□□ -0.83
MSH5-218ENST00000494646 MAGEB5Q9BZ81 275 aa9.86□□□□□ -0.83
MSH5-218ENST00000494646 PCED1AQ9H1Q7 454 aa9.86□□□□□ -0.83
MSH5-218ENST00000494646 TMEM59LQ9UK28 342 aa9.86□□□□□ -0.83
MSH5-218ENST00000494646 KLK13Q9UKR3 277 aa9.86□□□□□ -0.83
MSH5-218ENST00000494646 ANKRD6Q9Y2G4 727 aa9.86□□□□□ -0.83
MSH5-218ENST00000494646 FNDC3AQ9Y2H6 1198 aaKnown RBP9.86□□□□□ -0.83
MSH5-218ENST00000494646 OR51B4Q9Y5P0 310 aa9.86□□□□□ -0.83
MSH5-218ENST00000494646 PTPRBP23467 1997 aa9.86□□□□□ -0.83
MSH5-218ENST00000494646 USP24Q9UPU5 2620 aa9.86□□□□□ -0.83
MSH5-218ENST00000494646 GOLGA4Q13439 2230 aaKnown RBP9.85□□□□□ -0.83
MSH5-218ENST00000494646 A0A0D9SEW6 157 aa9.85□□□□□ -0.83
MSH5-218ENST00000494646 A0A1W2PPC4 97 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms