RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 RNF8O76064 485 aa4.87□□□□□ -1.63
SMC4-224ENST00000494612 PKMP14618 531 aaKnown RBP4.87□□□□□ -1.63
SMC4-224ENST00000494612 ARSAP15289 507 aa4.87□□□□□ -1.63
SMC4-224ENST00000494612 IGFBP2P18065 325 aa4.87□□□□□ -1.63
SMC4-224ENST00000494612 CD53P19397 219 aa4.87□□□□□ -1.63
SMC4-224ENST00000494612 PRKCHP24723 683 aa4.87□□□□□ -1.63
SMC4-224ENST00000494612 PGM1P36871 562 aa4.87□□□□□ -1.63
SMC4-224ENST00000494612 LIFRP42702 1097 aa4.87□□□□□ -1.63
SMC4-224ENST00000494612 LAMB3Q13751 1172 aa4.87□□□□□ -1.63
SMC4-224ENST00000494612 EFR3AQ14156 821 aa4.87□□□□□ -1.63
SMC4-224ENST00000494612 ZNF268Q14587 947 aaPredicted RBP4.87□□□□□ -1.63
SMC4-224ENST00000494612 NFIL3Q16649 462 aa4.87□□□□□ -1.63
SMC4-224ENST00000494612 AP5B1Q2VPB7 878 aa4.87□□□□□ -1.63
SMC4-224ENST00000494612 TMEM63BQ5T3F8 832 aa4.87□□□□□ -1.63
SMC4-224ENST00000494612 MIS18BP1Q6P0N0 1132 aa4.87□□□□□ -1.63
SMC4-224ENST00000494612 SLC30A9Q6PML9 568 aa4.87□□□□□ -1.63
SMC4-224ENST00000494612 MDGA2Q7Z553 956 aa4.87□□□□□ -1.63
SMC4-224ENST00000494612 UEVLDQ8IX04 471 aa4.87□□□□□ -1.63
SMC4-224ENST00000494612 ADPRHL1Q8NDY3 354 aa4.87□□□□□ -1.63
SMC4-224ENST00000494612 C2CD4CQ8TF44 421 aa4.87□□□□□ -1.63
SMC4-224ENST00000494612 MAP4K1Q92918 833 aa4.87□□□□□ -1.63
SMC4-224ENST00000494612 RNFT2Q96EX2 444 aa4.87□□□□□ -1.63
SMC4-224ENST00000494612 SEC62Q99442 399 aaKnown RBP4.87□□□□□ -1.63
SMC4-224ENST00000494612 SLC26A6Q9BXS9 759 aa4.87□□□□□ -1.63
SMC4-224ENST00000494612 MROH8Q9H579 483 aa4.87□□□□□ -1.63
SMC4-224ENST00000494612 TUBA8Q9NY65 449 aaPredicted RBP4.87□□□□□ -1.63
SMC4-224ENST00000494612 PNMA2Q9UL42 364 aa4.87□□□□□ -1.63
SMC4-224ENST00000494612 UNC13AQ9UPW8 1703 aa4.86□□□□□ -1.63
SMC4-224ENST00000494612 CXorf65A6NEN9 183 aa4.86□□□□□ -1.63
SMC4-224ENST00000494612 INPPL1O15357 1258 aa4.86□□□□□ -1.63
SMC4-224ENST00000494612 NFATC1O95644 943 aa4.86□□□□□ -1.63
SMC4-224ENST00000494612 PLAUP00749 431 aa4.86□□□□□ -1.63
SMC4-224ENST00000494612 CYP4B1P13584 511 aa4.86□□□□□ -1.63
SMC4-224ENST00000494612 TNFAIP3P21580 790 aa4.86□□□□□ -1.63
SMC4-224ENST00000494612 TGM2P21980 687 aa4.86□□□□□ -1.63
SMC4-224ENST00000494612 GSTM2P28161 218 aa4.86□□□□□ -1.63
SMC4-224ENST00000494612 HOXA7P31268 230 aaPredicted RBP4.86□□□□□ -1.63
SMC4-224ENST00000494612 GGT5P36269 586 aa4.86□□□□□ -1.63
SMC4-224ENST00000494612 SOX2P48431 317 aa4.86□□□□□ -1.63
SMC4-224ENST00000494612 MCM2P49736 904 aa4.86□□□□□ -1.63
SMC4-224ENST00000494612 ARHGAP8P85298 464 aa4.86□□□□□ -1.63
SMC4-224ENST00000494612 TLE2Q04725 743 aa4.86□□□□□ -1.63
SMC4-224ENST00000494612 THOC5Q13769 683 aaKnown RBP4.86□□□□□ -1.63
SMC4-224ENST00000494612 GLE1Q53GS7 698 aaKnown RBP4.86□□□□□ -1.63
SMC4-224ENST00000494612 WDR45BQ5MNZ6 344 aa4.86□□□□□ -1.63
SMC4-224ENST00000494612 SLC9C2Q5TAH2 1124 aa4.86□□□□□ -1.63
SMC4-224ENST00000494612 LIPMQ5VYY2 423 aa4.86□□□□□ -1.63
SMC4-224ENST00000494612 SLC22A25Q6T423 547 aa4.86□□□□□ -1.63
SMC4-224ENST00000494612 BBS12Q6ZW61 710 aa4.86□□□□□ -1.63
SMC4-224ENST00000494612 CNGA4Q8IV77 575 aa4.86□□□□□ -1.63
SMC4-224ENST00000494612 SCN4BQ8IWT1 228 aa4.86□□□□□ -1.63
SMC4-224ENST00000494612 TMEM217Q8N7C4 229 aa4.86□□□□□ -1.63
SMC4-224ENST00000494612 C8orf58Q8NAV2 365 aa4.86□□□□□ -1.63
SMC4-224ENST00000494612 ATP2A3Q93084 1043 aa4.86□□□□□ -1.63
SMC4-224ENST00000494612 MASTLQ96GX5 879 aa4.86□□□□□ -1.63
SMC4-224ENST00000494612 GATA5Q9BWX5 397 aaPredicted RBP4.86□□□□□ -1.63
SMC4-224ENST00000494612 TTYH1Q9H313 450 aaPredicted RBP4.86□□□□□ -1.63
SMC4-224ENST00000494612 WASH6PQ9NQA3 447 aa4.86□□□□□ -1.63
SMC4-224ENST00000494612 RASSF1Q9NS23 344 aa4.86□□□□□ -1.63
SMC4-224ENST00000494612 PI4KBQ9UBF8 816 aa4.86□□□□□ -1.63
SMC4-224ENST00000494612 SLC8A2Q9UPR5 921 aa4.86□□□□□ -1.63
SMC4-224ENST00000494612 GDAQ9Y2T3 454 aa4.86□□□□□ -1.63
SMC4-224ENST00000494612 EMSYQ7Z589 1322 aa4.86□□□□□ -1.63
SMC4-224ENST00000494612 A0A1B0GVC2 190 aa4.85□□□□□ -1.63
SMC4-224ENST00000494612 SAC3D1A6NKF1 404 aa4.85□□□□□ -1.63
SMC4-224ENST00000494612 ARHGAP25P42331 645 aa4.85□□□□□ -1.63
SMC4-224ENST00000494612 ADPRHP54922 357 aa4.85□□□□□ -1.63
SMC4-224ENST00000494612 ZBTB16Q05516 673 aa4.85□□□□□ -1.63
SMC4-224ENST00000494612 GALNT2Q10471 571 aa4.85□□□□□ -1.63
SMC4-224ENST00000494612 NAA25Q14CX7 972 aa4.85□□□□□ -1.63
SMC4-224ENST00000494612 GXYLT1Q4G148 440 aa4.85□□□□□ -1.63
SMC4-224ENST00000494612 RBM44Q6ZP01 1051 aaKnown RBP4.85□□□□□ -1.63
SMC4-224ENST00000494612 BRSK2Q8IWQ3 736 aa4.85□□□□□ -1.63
SMC4-224ENST00000494612 ADGRF4Q8IZF3 695 aa4.85□□□□□ -1.63
SMC4-224ENST00000494612 TCP11L2Q8N4U5 519 aa4.85□□□□□ -1.63
SMC4-224ENST00000494612 ENDOVQ8N8Q3 282 aaKnown RBP4.85□□□□□ -1.63
SMC4-224ENST00000494612 ARL14EPQ8N8R7 260 aaPredicted RBP4.85□□□□□ -1.63
SMC4-224ENST00000494612 NAXEQ8NCW5 288 aa4.85□□□□□ -1.63
SMC4-224ENST00000494612 IL17REQ8NFR9 667 aa4.85□□□□□ -1.63
SMC4-224ENST00000494612 KAT2BQ92831 832 aa4.85□□□□□ -1.63
SMC4-224ENST00000494612 HMCESQ96FZ2 354 aa4.85□□□□□ -1.63
SMC4-224ENST00000494612 MPP4Q96JB8 637 aa4.85□□□□□ -1.63
SMC4-224ENST00000494612 NPAS1Q99742 590 aa4.85□□□□□ -1.63
SMC4-224ENST00000494612 UBN1Q9NPG3 1134 aa4.85□□□□□ -1.63
SMC4-224ENST00000494612 IPO11Q9UI26 975 aaKnown RBP4.85□□□□□ -1.63
SMC4-224ENST00000494612 GJD2Q9UKL4 321 aa4.85□□□□□ -1.63
SMC4-224ENST00000494612 MAFFQ9ULX9 164 aa4.85□□□□□ -1.63
SMC4-224ENST00000494612 PKP3Q9Y446 797 aa4.85□□□□□ -1.63
SMC4-224ENST00000494612 AFG3L2Q9Y4W6 797 aa4.85□□□□□ -1.63
SMC4-224ENST00000494612 WDR17Q8IZU2 1322 aa4.85□□□□□ -1.63
SMC4-224ENST00000494612 KCNU1A8MYU2 1149 aa4.84□□□□□ -1.63
SMC4-224ENST00000494612 MCIDASD6RGH6 385 aa4.84□□□□□ -1.63
SMC4-224ENST00000494612 J3KRW8 73 aa4.84□□□□□ -1.63
SMC4-224ENST00000494612 INSIG1O15503 277 aa4.84□□□□□ -1.63
SMC4-224ENST00000494612 EPB41L2O43491 1005 aaKnown RBP4.84□□□□□ -1.63
SMC4-224ENST00000494612 TSPAN3O60637 253 aa4.84□□□□□ -1.63
SMC4-224ENST00000494612 UGDHO60701 494 aa4.84□□□□□ -1.63
SMC4-224ENST00000494612 CBX6O95503 412 aa4.84□□□□□ -1.63
SMC4-224ENST00000494612 IFIT1P09914 478 aaKnown RBP4.84□□□□□ -1.63
SMC4-224ENST00000494612 HOXB9P17482 250 aaPredicted RBP4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms