RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 CDK4P11802 303 aa9.92□□□□□ -0.82
UBR4-216ENST00000494503 ACADVLP49748 655 aa9.92□□□□□ -0.82
UBR4-216ENST00000494503 METAP1P53582 386 aa9.92□□□□□ -0.82
UBR4-216ENST00000494503 NXPH1P58417 271 aa9.92□□□□□ -0.82
UBR4-216ENST00000494503 YWHAZP63104 245 aaKnown RBP9.92□□□□□ -0.82
UBR4-216ENST00000494503 PITX1P78337 314 aaPredicted RBP9.92□□□□□ -0.82
UBR4-216ENST00000494503 CDK17Q00537 523 aa9.92□□□□□ -0.82
UBR4-216ENST00000494503 GCNT1Q02742 428 aa9.92□□□□□ -0.82
UBR4-216ENST00000494503 CCDC173Q0VFZ6 552 aa9.92□□□□□ -0.82
UBR4-216ENST00000494503 KCNH2Q12809 1159 aa9.92□□□□□ -0.82
UBR4-216ENST00000494503 NNTQ13423 1086 aa9.92□□□□□ -0.82
UBR4-216ENST00000494503 ARHGAP44Q17R89 818 aa9.92□□□□□ -0.82
UBR4-216ENST00000494503 SETMARQ53H47 684 aaPredicted RBP9.92□□□□□ -0.82
UBR4-216ENST00000494503 KDM7AQ6ZMT4 941 aa9.92□□□□□ -0.82
UBR4-216ENST00000494503 Q6ZVU0 165 aa9.92□□□□□ -0.82
UBR4-216ENST00000494503 KDM1BQ8NB78 822 aa9.92□□□□□ -0.82
UBR4-216ENST00000494503 KLK6Q92876 244 aa9.92□□□□□ -0.82
UBR4-216ENST00000494503 PTPRN2Q92932 1015 aa9.92□□□□□ -0.82
UBR4-216ENST00000494503 SLC39A13Q96H72 371 aa9.92□□□□□ -0.82
UBR4-216ENST00000494503 NAF1Q96HR8 494 aaKnown RBP9.92□□□□□ -0.82
UBR4-216ENST00000494503 DHTKD1Q96HY7 919 aaPredicted RBP9.92□□□□□ -0.82
UBR4-216ENST00000494503 FCRL3Q96P31 734 aaPredicted RBP9.92□□□□□ -0.82
UBR4-216ENST00000494503 FAM129BQ96TA1 746 aa9.92□□□□□ -0.82
UBR4-216ENST00000494503 SIK2Q9H0K1 926 aa9.92□□□□□ -0.82
UBR4-216ENST00000494503 DYRK4Q9NR20 520 aa9.92□□□□□ -0.82
UBR4-216ENST00000494503 WDR70Q9NW82 654 aa9.92□□□□□ -0.82
UBR4-216ENST00000494503 VANGL2Q9ULK5 521 aa9.92□□□□□ -0.82
UBR4-216ENST00000494503 PTPRQQ9UMZ3 2332 aa9.91□□□□□ -0.82
UBR4-216ENST00000494503 A0A087WV48 116 aa9.91□□□□□ -0.82
UBR4-216ENST00000494503 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.91□□□□□ -0.82
UBR4-216ENST00000494503 A0A1B0GVM2 712 aa9.91□□□□□ -0.82
UBR4-216ENST00000494503 A0A1W2PR77 199 aa9.91□□□□□ -0.82
UBR4-216ENST00000494503 FAM170AA1A519 330 aa9.91□□□□□ -0.82
UBR4-216ENST00000494503 TCAF2A6NFQ2 919 aa9.91□□□□□ -0.82
UBR4-216ENST00000494503 KCNU1A8MYU2 1149 aa9.91□□□□□ -0.82
UBR4-216ENST00000494503 E9PAM4 449 aa9.91□□□□□ -0.82
UBR4-216ENST00000494503 KPNA3O00505 521 aaPredicted RBP9.91□□□□□ -0.82
UBR4-216ENST00000494503 SLC31A1O15431 190 aa9.91□□□□□ -0.82
UBR4-216ENST00000494503 P4HA2O15460 535 aa9.91□□□□□ -0.82
UBR4-216ENST00000494503 PAPSS1O43252 624 aaPredicted RBP9.91□□□□□ -0.82
UBR4-216ENST00000494503 C1SP09871 688 aa9.91□□□□□ -0.82
UBR4-216ENST00000494503 SLC2A3P11169 496 aa9.91□□□□□ -0.82
UBR4-216ENST00000494503 CD44P16070 742 aaKnown RBP9.91□□□□□ -0.82
UBR4-216ENST00000494503 PRLRP16471 622 aa9.91□□□□□ -0.82
UBR4-216ENST00000494503 CKMT2P17540 419 aa9.91□□□□□ -0.82
UBR4-216ENST00000494503 GLDCP23378 1020 aa9.91□□□□□ -0.82
UBR4-216ENST00000494503 CCR1P32246 355 aa9.91□□□□□ -0.82
UBR4-216ENST00000494503 DRD3P35462 400 aa9.91□□□□□ -0.82
UBR4-216ENST00000494503 EIF2S3P41091 472 aaKnown RBP9.91□□□□□ -0.82
UBR4-216ENST00000494503 PPP1R2P41236 205 aa9.91□□□□□ -0.82
UBR4-216ENST00000494503 GPD2P43304 727 aa9.91□□□□□ -0.82
UBR4-216ENST00000494503 OXCT1P55809 520 aa9.91□□□□□ -0.82
UBR4-216ENST00000494503 C19orf57Q0VDD7 668 aa9.91□□□□□ -0.82
UBR4-216ENST00000494503 CNTN1Q12860 1018 aa9.91□□□□□ -0.82
UBR4-216ENST00000494503 ZNF177Q13360 481 aaPredicted RBP9.91□□□□□ -0.82
UBR4-216ENST00000494503 PDCLQ13371 301 aa9.91□□□□□ -0.82
UBR4-216ENST00000494503 SLC12A1Q13621 1099 aa9.91□□□□□ -0.82
UBR4-216ENST00000494503 ARID5BQ14865 1188 aa9.91□□□□□ -0.82
UBR4-216ENST00000494503 SHBQ15464 509 aa9.91□□□□□ -0.82
UBR4-216ENST00000494503 TAF5Q15542 800 aa9.91□□□□□ -0.82
UBR4-216ENST00000494503 COBLL1Q53SF7 1204 aa9.91□□□□□ -0.82
UBR4-216ENST00000494503 TTC39BQ5VTQ0 682 aaPredicted RBP9.91□□□□□ -0.82
UBR4-216ENST00000494503 OR6B2Q6IFH4 312 aa9.91□□□□□ -0.82
UBR4-216ENST00000494503 TMC6Q7Z403 805 aa9.91□□□□□ -0.82
UBR4-216ENST00000494503 DEFB106AQ8N104 65 aa9.91□□□□□ -0.82
UBR4-216ENST00000494503 MFSD2AQ8NA29 543 aa9.91□□□□□ -0.82
UBR4-216ENST00000494503 ATP11CQ8NB49 1132 aa9.91□□□□□ -0.82
UBR4-216ENST00000494503 EHBP1Q8NDI1 1231 aa9.91□□□□□ -0.82
UBR4-216ENST00000494503 KLHDC7BQ96G42 594 aa9.91□□□□□ -0.82
UBR4-216ENST00000494503 KREMEN1Q96MU8 473 aa9.91□□□□□ -0.82
UBR4-216ENST00000494503 UBL7Q96S82 380 aaPredicted RBP9.91□□□□□ -0.82
UBR4-216ENST00000494503 PPP1R9BQ96SB3 815 aa9.91□□□□□ -0.82
UBR4-216ENST00000494503 CRACR2AQ9BSW2 395 aa9.91□□□□□ -0.82
UBR4-216ENST00000494503 CALN1Q9BXU9 219 aa9.91□□□□□ -0.82
UBR4-216ENST00000494503 THAP9Q9H5L6 903 aa9.91□□□□□ -0.82
UBR4-216ENST00000494503 FZD3Q9NPG1 666 aa9.91□□□□□ -0.82
UBR4-216ENST00000494503 ACP6Q9NPH0 428 aa9.91□□□□□ -0.82
UBR4-216ENST00000494503 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.91□□□□□ -0.82
UBR4-216ENST00000494503 CYTH4Q9UIA0 394 aa9.91□□□□□ -0.82
UBR4-216ENST00000494503 MAN1B1Q9UKM7 699 aa9.91□□□□□ -0.82
UBR4-216ENST00000494503 TPX2Q9ULW0 747 aaKnown RBP9.91□□□□□ -0.82
UBR4-216ENST00000494503 CLCA2Q9UQC9 943 aa9.91□□□□□ -0.82
UBR4-216ENST00000494503 FARP1Q9Y4F1 1045 aaPredicted RBP9.91□□□□□ -0.82
UBR4-216ENST00000494503 PLRG1O43660 514 aaKnown RBP9.9□□□□□ -0.82
UBR4-216ENST00000494503 TLX3O43711 291 aaPredicted RBP9.9□□□□□ -0.82
UBR4-216ENST00000494503 BRINP1O60477 761 aa9.9□□□□□ -0.82
UBR4-216ENST00000494503 RNGTTO60942 597 aaKnown RBP9.9□□□□□ -0.82
UBR4-216ENST00000494503 ENDOD1O94919 500 aa9.9□□□□□ -0.82
UBR4-216ENST00000494503 PCDH8O95206 1070 aa9.9□□□□□ -0.82
UBR4-216ENST00000494503 RHOCP08134 193 aa9.9□□□□□ -0.82
UBR4-216ENST00000494503 THEGLP0DJG4 465 aa9.9□□□□□ -0.82
UBR4-216ENST00000494503 MCCD1P59942 119 aaPredicted RBP9.9□□□□□ -0.82
UBR4-216ENST00000494503 PAK1Q13153 545 aa9.9□□□□□ -0.82
UBR4-216ENST00000494503 DLG2Q15700 870 aa9.9□□□□□ -0.82
UBR4-216ENST00000494503 FBXL22Q6P050 247 aa9.9□□□□□ -0.82
UBR4-216ENST00000494503 GJB7Q6PEY0 223 aa9.9□□□□□ -0.82
UBR4-216ENST00000494503 SPATS2Q86XZ4 545 aaKnown RBP9.9□□□□□ -0.82
UBR4-216ENST00000494503 GRIN3AQ8TCU5 1115 aa9.9□□□□□ -0.82
UBR4-216ENST00000494503 ZNF606Q8WXB4 792 aa9.9□□□□□ -0.82
UBR4-216ENST00000494503 SLC39A7Q92504 469 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms