RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 YPEL5P62699 121 aa2.62□□□□□ -1.99
LMNB1-207ENST00000494185 VAMP2P63027 116 aa2.62□□□□□ -1.99
LMNB1-207ENST00000494185 SSBP2P81877 361 aaPredicted RBP2.62□□□□□ -1.99
LMNB1-207ENST00000494185 B4GALNT1Q00973 533 aa2.62□□□□□ -1.99
LMNB1-207ENST00000494185 CFHR1Q03591 330 aa2.62□□□□□ -1.99
LMNB1-207ENST00000494185 TLE2Q04725 743 aa2.62□□□□□ -1.99
LMNB1-207ENST00000494185 DMWDQ09019 674 aa2.62□□□□□ -1.99
LMNB1-207ENST00000494185 PDE1CQ14123 709 aaPredicted RBP2.62□□□□□ -1.99
LMNB1-207ENST00000494185 RBMS2Q15434 407 aaKnown RBP2.62□□□□□ -1.99
LMNB1-207ENST00000494185 TAF5Q15542 800 aa2.62□□□□□ -1.99
LMNB1-207ENST00000494185 ETFDHQ16134 617 aa2.62□□□□□ -1.99
LMNB1-207ENST00000494185 SUPT20HL1Q3ZLR7 823 aa2.62□□□□□ -1.99
LMNB1-207ENST00000494185 RUNDC3AQ59EK9 446 aa2.62□□□□□ -1.99
LMNB1-207ENST00000494185 FAAH2Q6GMR7 532 aa2.62□□□□□ -1.99
LMNB1-207ENST00000494185 SLC2A7Q6PXP3 512 aa2.62□□□□□ -1.99
LMNB1-207ENST00000494185 BRINP3Q76B58 766 aa2.62□□□□□ -1.99
LMNB1-207ENST00000494185 B4GALNT4Q76KP1 1039 aa2.62□□□□□ -1.99
LMNB1-207ENST00000494185 ANKS1BQ7Z6G8 1248 aa2.62□□□□□ -1.99
LMNB1-207ENST00000494185 TFAP2DQ7Z6R9 452 aa2.62□□□□□ -1.99
LMNB1-207ENST00000494185 TMTC1Q8IUR5 882 aa2.62□□□□□ -1.99
LMNB1-207ENST00000494185 TMTC2Q8N394 836 aa2.62□□□□□ -1.99
LMNB1-207ENST00000494185 SLC2A12Q8TD20 617 aa2.62□□□□□ -1.99
LMNB1-207ENST00000494185 NTN5Q8WTR8 489 aaPredicted RBP2.62□□□□□ -1.99
LMNB1-207ENST00000494185 NSMCE1Q8WV22 266 aa2.62□□□□□ -1.99
LMNB1-207ENST00000494185 HERVK_113Q902F9 699 aa2.62□□□□□ -1.99
LMNB1-207ENST00000494185 SH3KBP1Q96B97 665 aa2.62□□□□□ -1.99
LMNB1-207ENST00000494185 SDCCAG3Q96C92 435 aa2.62□□□□□ -1.99
LMNB1-207ENST00000494185 PYM1Q9BRP8 204 aaKnown RBP2.62□□□□□ -1.99
LMNB1-207ENST00000494185 QTRT1Q9BXR0 403 aaKnown RBP2.62□□□□□ -1.99
LMNB1-207ENST00000494185 OSBPL5Q9H0X9 879 aaPredicted RBP2.62□□□□□ -1.99
LMNB1-207ENST00000494185 UBN1Q9NPG3 1134 aa2.62□□□□□ -1.99
LMNB1-207ENST00000494185 G6PC2Q9NQR9 355 aa2.62□□□□□ -1.99
LMNB1-207ENST00000494185 ELOVL5Q9NYP7 299 aa2.62□□□□□ -1.99
LMNB1-207ENST00000494185 RNF7Q9UBF6 113 aa2.62□□□□□ -1.99
LMNB1-207ENST00000494185 KCND3Q9UK17 655 aa2.62□□□□□ -1.99
LMNB1-207ENST00000494185 AGO2Q9UKV8 859 aaKnown RBP2.62□□□□□ -1.99
LMNB1-207ENST00000494185 B3GNT3Q9Y2A9 372 aa2.62□□□□□ -1.99
LMNB1-207ENST00000494185 PCDHA10Q9Y5I2 948 aa2.62□□□□□ -1.99
LMNB1-207ENST00000494185 COPG1Q9Y678 874 aaKnown RBP2.62□□□□□ -1.99
LMNB1-207ENST00000494185 CCDC196A0A1B0GTZ2 297 aa2.61□□□□□ -1.99
LMNB1-207ENST00000494185 CGB1A6NKQ9 187 aa2.61□□□□□ -1.99
LMNB1-207ENST00000494185 C2CD4BA6NLJ0 364 aa2.61□□□□□ -1.99
LMNB1-207ENST00000494185 B4E171 279 aa2.61□□□□□ -1.99
LMNB1-207ENST00000494185 MCIDASD6RGH6 385 aa2.61□□□□□ -1.99
LMNB1-207ENST00000494185 F5H0A9 414 aaPredicted RBP2.61□□□□□ -1.99
LMNB1-207ENST00000494185 H3BNX3 289 aa2.61□□□□□ -1.99
LMNB1-207ENST00000494185 RHODO00212 210 aa2.61□□□□□ -1.99
LMNB1-207ENST00000494185 HOXC11O43248 304 aaPredicted RBP2.61□□□□□ -1.99
LMNB1-207ENST00000494185 STRNO43815 780 aa2.61□□□□□ -1.99
LMNB1-207ENST00000494185 HBP1O60381 514 aa2.61□□□□□ -1.99
LMNB1-207ENST00000494185 KRT38O76015 456 aa2.61□□□□□ -1.99
LMNB1-207ENST00000494185 HEXIM1O94992 359 aaKnown RBP2.61□□□□□ -1.99
LMNB1-207ENST00000494185 KAT7O95251 611 aa2.61□□□□□ -1.99
LMNB1-207ENST00000494185 TFRCP02786 760 aaKnown RBP2.61□□□□□ -1.99
LMNB1-207ENST00000494185 TK1P04183 234 aa2.61□□□□□ -1.99
LMNB1-207ENST00000494185 MMP3P08254 477 aa2.61□□□□□ -1.99
LMNB1-207ENST00000494185 ALDOCP09972 364 aaKnown RBP2.61□□□□□ -1.99
LMNB1-207ENST00000494185 RFPL3SP0C7P2 107 aa2.61□□□□□ -1.99
LMNB1-207ENST00000494185 ELF1P32519 619 aa2.61□□□□□ -1.99
LMNB1-207ENST00000494185 IDUAP35475 653 aa2.61□□□□□ -1.99
LMNB1-207ENST00000494185 KRT9P35527 623 aa2.61□□□□□ -1.99
LMNB1-207ENST00000494185 TSPAN7P41732 249 aa2.61□□□□□ -1.99
LMNB1-207ENST00000494185 SKIV2L2P42285 1042 aaKnown RBP2.61□□□□□ -1.99
LMNB1-207ENST00000494185 SOX2P48431 317 aa2.61□□□□□ -1.99
LMNB1-207ENST00000494185 RPS6KA3P51812 740 aa2.61□□□□□ -1.99
LMNB1-207ENST00000494185 RBM5P52756 815 aaKnown RBP eCLIP2.61□□□□□ -1.99
LMNB1-207ENST00000494185 ACTR2P61160 394 aa2.61□□□□□ -1.99
LMNB1-207ENST00000494185 IRX6P78412 446 aaPredicted RBP2.61□□□□□ -1.99
LMNB1-207ENST00000494185 SRSF1Q07955 248 aaKnown RBP eCLIP2.61□□□□□ -1.99
LMNB1-207ENST00000494185 TRAF2Q12933 501 aa2.61□□□□□ -1.99
LMNB1-207ENST00000494185 G3BP1Q13283 466 aaKnown RBP eCLIP2.61□□□□□ -1.993e-7■■■■■ 30.8
LMNB1-207ENST00000494185 PDCLQ13371 301 aa2.61□□□□□ -1.99
LMNB1-207ENST00000494185 CUL4BQ13620 913 aa2.61□□□□□ -1.99
LMNB1-207ENST00000494185 ALKBH1Q13686 389 aaKnown RBP2.61□□□□□ -1.99
LMNB1-207ENST00000494185 RABEP1Q15276 862 aa2.61□□□□□ -1.99
LMNB1-207ENST00000494185 SMAD1Q15797 465 aaKnown RBP2.61□□□□□ -1.99
LMNB1-207ENST00000494185 Q4G0T1 1027 aa2.61□□□□□ -1.99
LMNB1-207ENST00000494185 C6orf10Q5SRN2 563 aa2.61□□□□□ -1.99
LMNB1-207ENST00000494185 ZNF280DQ6N043 979 aa2.61□□□□□ -1.99
LMNB1-207ENST00000494185 CFAP161Q6P656 301 aa2.61□□□□□ -1.99
LMNB1-207ENST00000494185 DSTYKQ6XUX3 929 aa2.61□□□□□ -1.99
LMNB1-207ENST00000494185 SYNE3Q6ZMZ3 975 aa2.61□□□□□ -1.99
LMNB1-207ENST00000494185 COLCA1Q6ZS62 124 aa2.61□□□□□ -1.99
LMNB1-207ENST00000494185 SYT13Q7L8C5 426 aa2.61□□□□□ -1.99
LMNB1-207ENST00000494185 C1QL2Q7Z5L3 287 aa2.61□□□□□ -1.99
LMNB1-207ENST00000494185 MOGAT3Q86VF5 341 aa2.61□□□□□ -1.99
LMNB1-207ENST00000494185 PALB2Q86YC2 1186 aa2.61□□□□□ -1.99
LMNB1-207ENST00000494185 C2CD5Q86YS7 1000 aa2.61□□□□□ -1.99
LMNB1-207ENST00000494185 RFX6Q8HWS3 928 aa2.61□□□□□ -1.99
LMNB1-207ENST00000494185 RHPN2Q8IUC4 686 aa2.61□□□□□ -1.99
LMNB1-207ENST00000494185 FTSJ3Q8IY81 847 aaKnown RBP2.61□□□□□ -1.99
LMNB1-207ENST00000494185 ADGRF3Q8IZF5 1079 aa2.61□□□□□ -1.99
LMNB1-207ENST00000494185 PAQR4Q8N4S7 273 aaPredicted RBP2.61□□□□□ -1.99
LMNB1-207ENST00000494185 ANKRD44Q8N8A2 993 aa2.61□□□□□ -1.99
LMNB1-207ENST00000494185 CCDC89Q8N998 374 aa2.61□□□□□ -1.99
LMNB1-207ENST00000494185 PCYOX1LQ8NBM8 494 aa2.61□□□□□ -1.99
LMNB1-207ENST00000494185 OR52N4Q8NGI2 321 aa2.61□□□□□ -1.99
LMNB1-207ENST00000494185 CSGALNACT1Q8TDX6 532 aa2.61□□□□□ -1.99
LMNB1-207ENST00000494185 CLEC4CQ8WTT0 213 aa2.61□□□□□ -1.99
LMNB1-207ENST00000494185 SCARB1Q8WTV0 552 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms