RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 ADIPOR2Q86V24 386 aa14.92□□□□□ -0.02
BRCA1-223ENST00000494123 OR7D4Q8NG98 312 aa14.92□□□□□ -0.02
BRCA1-223ENST00000494123 CELF6Q96J87 481 aaKnown RBP14.92□□□□□ -0.02
BRCA1-223ENST00000494123 C2orf49Q9BVC5 232 aaPredicted RBP14.92□□□□□ -0.02
BRCA1-223ENST00000494123 PRDM16Q9HAZ2 1276 aa14.92□□□□□ -0.02
BRCA1-223ENST00000494123 ATP13A1Q9HD20 1204 aa14.92□□□□□ -0.02
BRCA1-223ENST00000494123 ELOVL2Q9NXB9 296 aa14.92□□□□□ -0.02
BRCA1-223ENST00000494123 MFHAS1Q9Y4C4 1052 aa14.92□□□□□ -0.02
BRCA1-223ENST00000494123 hCG_1818297A0A087WSY0 165 aa14.92□□□□□ -0.02
BRCA1-223ENST00000494123 ARHGAP42A6NI28 874 aa14.92□□□□□ -0.02
BRCA1-223ENST00000494123 RASA4BC9J798 803 aa14.92□□□□□ -0.02
BRCA1-223ENST00000494123 K7EQS6 105 aa14.92□□□□□ -0.02
BRCA1-223ENST00000494123 DFFAO00273 331 aa14.92□□□□□ -0.02
BRCA1-223ENST00000494123 KCNK3O14649 394 aa14.92□□□□□ -0.02
BRCA1-223ENST00000494123 RASA4O43374 803 aa14.92□□□□□ -0.02
BRCA1-223ENST00000494123 TIMM44O43615 452 aa14.92□□□□□ -0.02
BRCA1-223ENST00000494123 ATP5BP06576 529 aaKnown RBP14.92□□□□□ -0.02
BRCA1-223ENST00000494123 PYGMP11217 842 aa14.92□□□□□ -0.02
BRCA1-223ENST00000494123 KRT10P13645 584 aa14.92□□□□□ -0.02
BRCA1-223ENST00000494123 PLK1P53350 603 aa14.92□□□□□ -0.02
BRCA1-223ENST00000494123 SULT2A1Q06520 285 aa14.92□□□□□ -0.02
BRCA1-223ENST00000494123 CCINQ13939 588 aa14.92□□□□□ -0.02
BRCA1-223ENST00000494123 E2F5Q15329 346 aa14.92□□□□□ -0.02
BRCA1-223ENST00000494123 NCBP2-AS2Q69YL0 99 aa14.92□□□□□ -0.02
BRCA1-223ENST00000494123 SFTPA1Q8IWL2 248 aa14.92□□□□□ -0.02
BRCA1-223ENST00000494123 NPWQ8N729 165 aa14.92□□□□□ -0.02
BRCA1-223ENST00000494123 PQLC3Q8N755 202 aa14.92□□□□□ -0.02
BRCA1-223ENST00000494123 PJA1Q8NG27 643 aa14.92□□□□□ -0.02
BRCA1-223ENST00000494123 ARHGEF2Q92974 986 aaKnown RBP14.92□□□□□ -0.02
BRCA1-223ENST00000494123 PSMB7Q99436 277 aa14.92□□□□□ -0.02
BRCA1-223ENST00000494123 TLR10Q9BXR5 811 aa14.92□□□□□ -0.02
BRCA1-223ENST00000494123 LMAN1LQ9HAT1 526 aa14.92□□□□□ -0.02
BRCA1-223ENST00000494123 INTS6Q9UL03 887 aaKnown RBP14.92□□□□□ -0.02
BRCA1-223ENST00000494123 HPCAL4Q9UM19 191 aa14.92□□□□□ -0.02
BRCA1-223ENST00000494123 PLA2G4CQ9UP65 541 aa14.92□□□□□ -0.02
BRCA1-223ENST00000494123 SIT1Q9Y3P8 196 aa14.92□□□□□ -0.02
BRCA1-223ENST00000494123 MTF2Q9Y483 593 aaPredicted RBP14.92□□□□□ -0.02
BRCA1-223ENST00000494123 CBX4O00257 560 aa14.91□□□□□ -0.02
BRCA1-223ENST00000494123 RNF40O75150 1001 aa14.91□□□□□ -0.02
BRCA1-223ENST00000494123 PDGFBP01127 241 aaPredicted RBP14.91□□□□□ -0.02
BRCA1-223ENST00000494123 ASLP04424 464 aa14.91□□□□□ -0.02
BRCA1-223ENST00000494123 ACVRL1P37023 503 aa14.91□□□□□ -0.02
BRCA1-223ENST00000494123 TAZQ16635 292 aa14.91□□□□□ -0.02
BRCA1-223ENST00000494123 CCDC181Q5TID7 509 aa14.91□□□□□ -0.02
BRCA1-223ENST00000494123 TMEM215Q68D42 235 aa14.91□□□□□ -0.02
BRCA1-223ENST00000494123 SLC9A4Q6AI14 798 aa14.91□□□□□ -0.02
BRCA1-223ENST00000494123 DCAF4L2Q8NA75 395 aa14.91□□□□□ -0.02
BRCA1-223ENST00000494123 EZH1Q92800 747 aaPredicted RBP14.91□□□□□ -0.02
BRCA1-223ENST00000494123 TTC17Q96AE7 1141 aa14.91□□□□□ -0.02
BRCA1-223ENST00000494123 HMCESQ96FZ2 354 aa14.91□□□□□ -0.02
BRCA1-223ENST00000494123 HEMGNQ9BXL5 484 aa14.91□□□□□ -0.02
BRCA1-223ENST00000494123 OSBPL8Q9BZF1 889 aa14.91□□□□□ -0.02
BRCA1-223ENST00000494123 OSBPL6Q9BZF3 934 aa14.91□□□□□ -0.02
BRCA1-223ENST00000494123 NOL6Q9H6R4 1146 aaKnown RBP14.91□□□□□ -0.02
BRCA1-223ENST00000494123 LRRC19Q9H756 370 aa14.91□□□□□ -0.02
BRCA1-223ENST00000494123 RBM12Q9NTZ6 932 aaKnown RBP14.91□□□□□ -0.02
BRCA1-223ENST00000494123 SLC25A13Q9UJS0 675 aa14.91□□□□□ -0.02
BRCA1-223ENST00000494123 OR51B4Q9Y5P0 310 aa14.91□□□□□ -0.02
BRCA1-223ENST00000494123 TECTAO75443 2155 aa14.9□□□□□ -0.02
BRCA1-223ENST00000494123 TRIOO75962 3097 aa14.9□□□□□ -0.02
BRCA1-223ENST00000494123 MFSD11O43934 449 aa14.9□□□□□ -0.02
BRCA1-223ENST00000494123 CST8O60676 142 aa14.9□□□□□ -0.02
BRCA1-223ENST00000494123 DLDP09622 509 aaKnown RBP14.9□□□□□ -0.02
BRCA1-223ENST00000494123 CHRNB1P11230 501 aa14.9□□□□□ -0.02
BRCA1-223ENST00000494123 PTPN7P35236 360 aa14.9□□□□□ -0.02
BRCA1-223ENST00000494123 TIE1P35590 1138 aa14.9□□□□□ -0.02
BRCA1-223ENST00000494123 ST8SIA6P61647 398 aa14.9□□□□□ -0.02
BRCA1-223ENST00000494123 ECT2LQ008S8 904 aa14.9□□□□□ -0.02
BRCA1-223ENST00000494123 PAFAH1B3Q15102 231 aaKnown RBP14.9□□□□□ -0.02
BRCA1-223ENST00000494123 C2orf27AQ580R0 203 aa14.9□□□□□ -0.02
BRCA1-223ENST00000494123 DCAF12L1Q5VU92 463 aa14.9□□□□□ -0.02
BRCA1-223ENST00000494123 AADACL2Q6P093 401 aa14.9□□□□□ -0.02
BRCA1-223ENST00000494123 SYNPOQ8N3V7 929 aa14.9□□□□□ -0.02
BRCA1-223ENST00000494123 PLD5Q8N7P1 536 aa14.9□□□□□ -0.02
BRCA1-223ENST00000494123 ZNF513Q8N8E2 541 aaPredicted RBP14.9□□□□□ -0.02
BRCA1-223ENST00000494123 NETO2Q8NC67 525 aa14.9□□□□□ -0.02
BRCA1-223ENST00000494123 CYB5D2Q8WUJ1 264 aa14.9□□□□□ -0.02
BRCA1-223ENST00000494123 SORCS1Q8WY21 1168 aa14.9□□□□□ -0.02
BRCA1-223ENST00000494123 ACDQ96AP0 544 aa14.9□□□□□ -0.02
BRCA1-223ENST00000494123 ALG14Q96F25 216 aa14.9□□□□□ -0.02
BRCA1-223ENST00000494123 SLC39A8Q9C0K1 460 aa14.9□□□□□ -0.02
BRCA1-223ENST00000494123 KLC2Q9H0B6 622 aa14.9□□□□□ -0.02
BRCA1-223ENST00000494123 CARD9Q9H257 536 aa14.9□□□□□ -0.02
BRCA1-223ENST00000494123 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.9□□□□□ -0.02
BRCA1-223ENST00000494123 STARD13Q9Y3M8 1113 aa14.9□□□□□ -0.02
BRCA1-223ENST00000494123 HEY1Q9Y5J3 304 aa14.9□□□□□ -0.02
BRCA1-223ENST00000494123 NUP205Q92621 2012 aa14.89□□□□□ -0.03
BRCA1-223ENST00000494123 TJP3O95049 919 aa14.89□□□□□ -0.03
BRCA1-223ENST00000494123 ATP1A1P05023 1023 aaKnown RBP14.89□□□□□ -0.03
BRCA1-223ENST00000494123 NNMTP40261 264 aa14.89□□□□□ -0.03
BRCA1-223ENST00000494123 PAPOLAP51003 745 aaKnown RBP14.89□□□□□ -0.03
BRCA1-223ENST00000494123 FNDC3BQ53EP0 1204 aaKnown RBP14.89□□□□□ -0.03
BRCA1-223ENST00000494123 EMC10Q5UCC4 262 aa14.89□□□□□ -0.03
BRCA1-223ENST00000494123 AFMIDQ63HM1 303 aa14.89□□□□□ -0.03
BRCA1-223ENST00000494123 RETSATQ6NUM9 610 aa14.89□□□□□ -0.03
BRCA1-223ENST00000494123 ARHGAP12Q8IWW6 846 aa14.89□□□□□ -0.03
BRCA1-223ENST00000494123 CCDC105Q8IYK2 499 aa14.89□□□□□ -0.03
BRCA1-223ENST00000494123 ZNF687Q8N1G0 1237 aa14.89□□□□□ -0.03
BRCA1-223ENST00000494123 KCNV2Q8TDN2 545 aa14.89□□□□□ -0.03
BRCA1-223ENST00000494123 PBXIP1Q96AQ6 731 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms