RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 ASAH2Q9NR71 780 aa10.94□□□□□ -0.66
PDLIM1-205ENST00000493949 NAALADL1Q9UQQ1 740 aa10.94□□□□□ -0.66
PDLIM1-205ENST00000493949 DRG1Q9Y295 367 aaKnown RBP10.94□□□□□ -0.66
PDLIM1-205ENST00000493949 EFR3BQ9Y2G0 817 aa10.94□□□□□ -0.66
PDLIM1-205ENST00000493949 LRCH1Q9Y2L9 728 aa10.94□□□□□ -0.66
PDLIM1-205ENST00000493949 PCDH15Q96QU1 1955 aa10.94□□□□□ -0.66
PDLIM1-205ENST00000493949 EXOC1LA0A1B0GW35 172 aa10.93□□□□□ -0.66
PDLIM1-205ENST00000493949 DNALI1O14645 258 aaPredicted RBP10.93□□□□□ -0.66
PDLIM1-205ENST00000493949 CCDC22O60826 627 aa10.93□□□□□ -0.66
PDLIM1-205ENST00000493949 DNAJC6O75061 913 aa10.93□□□□□ -0.66
PDLIM1-205ENST00000493949 PEX11AO75192 247 aa10.93□□□□□ -0.66
PDLIM1-205ENST00000493949 FAM155BO75949 473 aa10.93□□□□□ -0.66
PDLIM1-205ENST00000493949 B3GAT3O94766 335 aa10.93□□□□□ -0.66
PDLIM1-205ENST00000493949 PROSCO94903 275 aa10.93□□□□□ -0.66
PDLIM1-205ENST00000493949 APBB3O95704 486 aa10.93□□□□□ -0.66
PDLIM1-205ENST00000493949 P4HBP07237 508 aaKnown RBP10.93□□□□□ -0.66
PDLIM1-205ENST00000493949 TPBGLP0DKB5 382 aa10.93□□□□□ -0.66
PDLIM1-205ENST00000493949 MYL4P12829 197 aa10.93□□□□□ -0.66
PDLIM1-205ENST00000493949 PLA2G2AP14555 144 aa10.93□□□□□ -0.66
PDLIM1-205ENST00000493949 GLRA2P23416 452 aa10.93□□□□□ -0.66
PDLIM1-205ENST00000493949 ADCY8P40145 1251 aa10.93□□□□□ -0.66
PDLIM1-205ENST00000493949 MARCKSL1P49006 195 aa10.93□□□□□ -0.66
PDLIM1-205ENST00000493949 SARNPP82979 210 aaKnown RBP10.93□□□□□ -0.66
PDLIM1-205ENST00000493949 HNRNPDQ14103 355 aaKnown RBP10.93□□□□□ -0.66
PDLIM1-205ENST00000493949 TFDP1Q14186 410 aa10.93□□□□□ -0.66
PDLIM1-205ENST00000493949 MRPL58Q14197 206 aaKnown RBP10.93□□□□□ -0.66
PDLIM1-205ENST00000493949 TBCCQ15814 346 aa10.93□□□□□ -0.66
PDLIM1-205ENST00000493949 CCDC142Q17RM4 750 aa10.93□□□□□ -0.66
PDLIM1-205ENST00000493949 ITPRIPL2Q3MIP1 535 aa10.93□□□□□ -0.66
PDLIM1-205ENST00000493949 AP1ARQ63HQ0 302 aa10.93□□□□□ -0.66
PDLIM1-205ENST00000493949 CYP2U1Q7Z449 544 aa10.93□□□□□ -0.66
PDLIM1-205ENST00000493949 ADAT2Q7Z6V5 191 aaKnown RBP10.93□□□□□ -0.66
PDLIM1-205ENST00000493949 ERICH1Q86X53 443 aa10.93□□□□□ -0.66
PDLIM1-205ENST00000493949 LURAP1LQ8IV03 231 aa10.93□□□□□ -0.66
PDLIM1-205ENST00000493949 ARID3BQ8IVW6 561 aaPredicted RBP10.93□□□□□ -0.66
PDLIM1-205ENST00000493949 TPH2Q8IWU9 490 aa10.93□□□□□ -0.66
PDLIM1-205ENST00000493949 ARHGAP18Q8N392 663 aa10.93□□□□□ -0.66
PDLIM1-205ENST00000493949 RBBP8NLQ8NC74 664 aaPredicted RBP10.93□□□□□ -0.66
PDLIM1-205ENST00000493949 FBXL13Q8NEE6 735 aa10.93□□□□□ -0.66
PDLIM1-205ENST00000493949 ZNF483Q8TF39 744 aaPredicted RBP10.93□□□□□ -0.66
PDLIM1-205ENST00000493949 ZFYVE19Q96K21 471 aa10.93□□□□□ -0.66
PDLIM1-205ENST00000493949 HHIPQ96QV1 700 aa10.93□□□□□ -0.66
PDLIM1-205ENST00000493949 GOLGA2P5Q9HBQ8 144 aa10.93□□□□□ -0.66
PDLIM1-205ENST00000493949 LRRC4CQ9HCJ2 640 aa10.93□□□□□ -0.66
PDLIM1-205ENST00000493949 HSPBP1Q9NZL4 362 aa10.93□□□□□ -0.66
PDLIM1-205ENST00000493949 PSMC3IPQ9P2W1 217 aaPredicted RBP10.93□□□□□ -0.66
PDLIM1-205ENST00000493949 PHTF1Q9UMS5 762 aa10.93□□□□□ -0.66
PDLIM1-205ENST00000493949 L3MBTL1Q9Y468 752 aa10.93□□□□□ -0.66
PDLIM1-205ENST00000493949 ATMQ13315 3056 aa10.93□□□□□ -0.66
PDLIM1-205ENST00000493949 COL6A6A6NMZ7 2263 aa10.93□□□□□ -0.66
PDLIM1-205ENST00000493949 GOLGA4Q13439 2230 aaKnown RBP10.93□□□□□ -0.66
PDLIM1-205ENST00000493949 PTPN13Q12923 2485 aa10.93□□□□□ -0.66
PDLIM1-205ENST00000493949 ANKRD63C9JTQ0 380 aa10.92□□□□□ -0.66
PDLIM1-205ENST00000493949 CLDN3O15551 220 aa10.92□□□□□ -0.66
PDLIM1-205ENST00000493949 SPAG6O75602 509 aa10.92□□□□□ -0.66
PDLIM1-205ENST00000493949 DLATP10515 647 aaKnown RBP10.92□□□□□ -0.66
PDLIM1-205ENST00000493949 UNGP13051 313 aaPredicted RBP10.92□□□□□ -0.66
PDLIM1-205ENST00000493949 VHLP40337 213 aa10.92□□□□□ -0.66
PDLIM1-205ENST00000493949 MAGEA4P43358 317 aa10.92□□□□□ -0.66
PDLIM1-205ENST00000493949 BRCC3P46736 316 aa10.92□□□□□ -0.66
PDLIM1-205ENST00000493949 ROR2Q01974 943 aaKnown RBP10.92□□□□□ -0.66
PDLIM1-205ENST00000493949 KCNA1Q09470 495 aa10.92□□□□□ -0.66
PDLIM1-205ENST00000493949 GRSF1Q12849 480 aaKnown RBP eCLIP10.92□□□□□ -0.66
PDLIM1-205ENST00000493949 KRT72Q14CN4 511 aa10.92□□□□□ -0.66
PDLIM1-205ENST00000493949 DBN1Q16643 649 aa10.92□□□□□ -0.66
PDLIM1-205ENST00000493949 UPP1Q16831 310 aa10.92□□□□□ -0.66
PDLIM1-205ENST00000493949 KLHL38Q2WGJ6 581 aa10.92□□□□□ -0.66
PDLIM1-205ENST00000493949 ZC2HC1CQ53FD0 456 aaPredicted RBP10.92□□□□□ -0.66
PDLIM1-205ENST00000493949 GLRA4Q5JXX5 417 aa10.92□□□□□ -0.66
PDLIM1-205ENST00000493949 IZUMO3Q5VZ72 239 aa10.92□□□□□ -0.66
PDLIM1-205ENST00000493949 CGB2Q6NT52 195 aa10.92□□□□□ -0.66
PDLIM1-205ENST00000493949 MAEAQ7L5Y9 396 aa10.92□□□□□ -0.66
PDLIM1-205ENST00000493949 CHSY1Q86X52 802 aa10.92□□□□□ -0.66
PDLIM1-205ENST00000493949 TMC8Q8IU68 726 aa10.92□□□□□ -0.66
PDLIM1-205ENST00000493949 ARHGEF19Q8IW93 802 aa10.92□□□□□ -0.66
PDLIM1-205ENST00000493949 TRIM42Q8IWZ5 723 aa10.92□□□□□ -0.66
PDLIM1-205ENST00000493949 C4orf19Q8IY42 314 aa10.92□□□□□ -0.66
PDLIM1-205ENST00000493949 SRRM1Q8IYB3 904 aaKnown RBP10.92□□□□□ -0.66
PDLIM1-205ENST00000493949 TMEM130Q8N3G9 435 aa10.92□□□□□ -0.66
PDLIM1-205ENST00000493949 ANKRD42Q8N9B4 389 aa10.92□□□□□ -0.66
PDLIM1-205ENST00000493949 LSM14AQ8ND56 463 aaKnown RBP10.92□□□□□ -0.66
PDLIM1-205ENST00000493949 C3orf58Q8NDZ4 430 aa10.92□□□□□ -0.66
PDLIM1-205ENST00000493949 TTC8Q8TAM2 541 aa10.92□□□□□ -0.66
PDLIM1-205ENST00000493949 C10orf82Q8WW14 230 aa10.92□□□□□ -0.66
PDLIM1-205ENST00000493949 ADAMTS14Q8WXS8 1223 aa10.92□□□□□ -0.66
PDLIM1-205ENST00000493949 ERP27Q96DN0 273 aa10.92□□□□□ -0.66
PDLIM1-205ENST00000493949 CHFRQ96EP1 664 aa10.92□□□□□ -0.66
PDLIM1-205ENST00000493949 DTNBP1Q96EV8 351 aa10.92□□□□□ -0.66
PDLIM1-205ENST00000493949 RMDN2Q96LZ7 410 aa10.92□□□□□ -0.66
PDLIM1-205ENST00000493949 UROC1Q96N76 676 aa10.92□□□□□ -0.66
PDLIM1-205ENST00000493949 PCDHB18PQ96TA0 734 aa10.92□□□□□ -0.66
PDLIM1-205ENST00000493949 OSBPL1AQ9BXW6 950 aa10.92□□□□□ -0.66
PDLIM1-205ENST00000493949 VPS11Q9H270 941 aa10.92□□□□□ -0.66
PDLIM1-205ENST00000493949 GPRC5CQ9NQ84 441 aa10.92□□□□□ -0.66
PDLIM1-205ENST00000493949 CYLDQ9NQC7 956 aa10.92□□□□□ -0.66
PDLIM1-205ENST00000493949 ANKEF1Q9NU02 776 aa10.92□□□□□ -0.66
PDLIM1-205ENST00000493949 CPSF2Q9P2I0 782 aaKnown RBP10.92□□□□□ -0.66
PDLIM1-205ENST00000493949 AFF4Q9UHB7 1163 aaKnown RBP10.92□□□□□ -0.66
PDLIM1-205ENST00000493949 ANAPC7Q9UJX3 599 aa10.92□□□□□ -0.66
PDLIM1-205ENST00000493949 RAXQ9Y2V3 346 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms