RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 AGO1Q9UL18 857 aaKnown RBP8.46□□□□□ -1.06
HDAC6-234ENST00000493923 NFE2L3Q9Y4A8 694 aa8.46□□□□□ -1.06
HDAC6-234ENST00000493923 SLC12A8A0AV02 714 aa8.45□□□□□ -1.06
HDAC6-234ENST00000493923 YJEFN3A6XGL0 299 aa8.45□□□□□ -1.06
HDAC6-234ENST00000493923 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.45□□□□□ -1.06
HDAC6-234ENST00000493923 O00370 1275 aa8.45□□□□□ -1.06
HDAC6-234ENST00000493923 GFRA2O00451 464 aa8.45□□□□□ -1.06
HDAC6-234ENST00000493923 SLC16A3O15427 465 aaKnown RBP8.45□□□□□ -1.06
HDAC6-234ENST00000493923 MSI1O43347 362 aaKnown RBP8.45□□□□□ -1.06
HDAC6-234ENST00000493923 RNF8O76064 485 aa8.45□□□□□ -1.06
HDAC6-234ENST00000493923 RHOBTB1O94844 696 aa8.45□□□□□ -1.06
HDAC6-234ENST00000493923 KCNK5O95279 499 aa8.45□□□□□ -1.06
HDAC6-234ENST00000493923 HOXB2P14652 356 aa8.45□□□□□ -1.06
HDAC6-234ENST00000493923 DESP17661 470 aa8.45□□□□□ -1.06
HDAC6-234ENST00000493923 TCP1P17987 556 aaKnown RBP8.45□□□□□ -1.06
HDAC6-234ENST00000493923 SDHBP21912 280 aa8.45□□□□□ -1.06
HDAC6-234ENST00000493923 ITPKAP23677 461 aa8.45□□□□□ -1.06
HDAC6-234ENST00000493923 NTSR1P30989 418 aa8.45□□□□□ -1.06
HDAC6-234ENST00000493923 CORO1AP31146 461 aaKnown RBP8.45□□□□□ -1.06
HDAC6-234ENST00000493923 CYLC1P35663 651 aaPredicted RBP8.45□□□□□ -1.06
HDAC6-234ENST00000493923 PBX1P40424 430 aa8.45□□□□□ -1.06
HDAC6-234ENST00000493923 PAFAH1B1P43034 410 aa8.45□□□□□ -1.06
HDAC6-234ENST00000493923 RGS7P49802 495 aa8.45□□□□□ -1.06
HDAC6-234ENST00000493923 SGSHP51688 502 aa8.45□□□□□ -1.06
HDAC6-234ENST00000493923 TKTL1P51854 596 aa8.45□□□□□ -1.06
HDAC6-234ENST00000493923 STX17P56962 302 aa8.45□□□□□ -1.06
HDAC6-234ENST00000493923 YWHAGP61981 247 aaKnown RBP eCLIP8.45□□□□□ -1.06
HDAC6-234ENST00000493923 ATP11AP98196 1134 aa8.45□□□□□ -1.06
HDAC6-234ENST00000493923 EOGTQ5NDL2 527 aa8.45□□□□□ -1.06
HDAC6-234ENST00000493923 BTBD8Q5XKL5 378 aa8.45□□□□□ -1.06
HDAC6-234ENST00000493923 TMEM215Q68D42 235 aa8.45□□□□□ -1.06
HDAC6-234ENST00000493923 RNF43Q68DV7 783 aa8.45□□□□□ -1.06
HDAC6-234ENST00000493923 PM20D1Q6GTS8 502 aa8.45□□□□□ -1.06
HDAC6-234ENST00000493923 KLHL10Q6JEL2 608 aa8.45□□□□□ -1.06
HDAC6-234ENST00000493923 TTI2Q6NXR4 508 aa8.45□□□□□ -1.06
HDAC6-234ENST00000493923 KLHDC10Q6PID8 442 aa8.45□□□□□ -1.06
HDAC6-234ENST00000493923 CYP2U1Q7Z449 544 aa8.45□□□□□ -1.06
HDAC6-234ENST00000493923 MAATS1Q7Z4T9 603 aa8.45□□□□□ -1.06
HDAC6-234ENST00000493923 CROCCP2Q86T23 111 aa8.45□□□□□ -1.06
HDAC6-234ENST00000493923 ANKRD52Q8NB46 1076 aa8.45□□□□□ -1.06
HDAC6-234ENST00000493923 RBBP8NLQ8NC74 664 aaPredicted RBP8.45□□□□□ -1.06
HDAC6-234ENST00000493923 CCDC197Q8NCU1 140 aa8.45□□□□□ -1.06
HDAC6-234ENST00000493923 CLEC4CQ8WTT0 213 aa8.45□□□□□ -1.06
HDAC6-234ENST00000493923 EDEM1Q92611 657 aa8.45□□□□□ -1.06
HDAC6-234ENST00000493923 MYEOVQ96EZ4 313 aa8.45□□□□□ -1.06
HDAC6-234ENST00000493923 PIWIL1Q96J94 861 aaKnown RBP8.45□□□□□ -1.06
HDAC6-234ENST00000493923 SEC16BQ96JE7 1060 aa8.45□□□□□ -1.06
HDAC6-234ENST00000493923 MED15Q96RN5 788 aa8.45□□□□□ -1.06
HDAC6-234ENST00000493923 NUP58Q9BVL2 599 aa8.45□□□□□ -1.06
HDAC6-234ENST00000493923 LSM14BQ9BX40 385 aaKnown RBP8.45□□□□□ -1.06
HDAC6-234ENST00000493923 OSBPL1AQ9BXW6 950 aa8.45□□□□□ -1.06
HDAC6-234ENST00000493923 TRIM7Q9C029 511 aa8.45□□□□□ -1.06
HDAC6-234ENST00000493923 ZWILCHQ9H900 591 aa8.45□□□□□ -1.06
HDAC6-234ENST00000493923 STIM2Q9P246 746 aa8.45□□□□□ -1.06
HDAC6-234ENST00000493923 SFMBT1Q9UHJ3 866 aa8.45□□□□□ -1.06
HDAC6-234ENST00000493923 TSPAN16Q9UKR8 245 aa8.45□□□□□ -1.06
HDAC6-234ENST00000493923 STARD13Q9Y3M8 1113 aa8.45□□□□□ -1.06
HDAC6-234ENST00000493923 MUC22E2RYF6 1773 aaPredicted RBP8.45□□□□□ -1.06
HDAC6-234ENST00000493923 PKD1L2Q7Z442 2459 aa8.44□□□□□ -1.06
HDAC6-234ENST00000493923 ZFHX4Q86UP3 3567 aa8.44□□□□□ -1.06
HDAC6-234ENST00000493923 IGHV1OR15-9A0A0B4J2B8 117 aa8.44□□□□□ -1.06
HDAC6-234ENST00000493923 CCT8L1PA6NM43 557 aa8.44□□□□□ -1.06
HDAC6-234ENST00000493923 TSPAN3O60637 253 aa8.44□□□□□ -1.06
HDAC6-234ENST00000493923 ZBED1O96006 694 aa8.44□□□□□ -1.06
HDAC6-234ENST00000493923 CD19P15391 556 aa8.44□□□□□ -1.06
HDAC6-234ENST00000493923 SPINK2P20155 84 aa8.44□□□□□ -1.06
HDAC6-234ENST00000493923 TPP2P29144 1249 aaPredicted RBP8.44□□□□□ -1.06
HDAC6-234ENST00000493923 PMLP29590 882 aa8.44□□□□□ -1.06
HDAC6-234ENST00000493923 IL12RB1P42701 662 aa8.44□□□□□ -1.06
HDAC6-234ENST00000493923 FMO5P49326 533 aa8.44□□□□□ -1.06
HDAC6-234ENST00000493923 PSMD7P51665 324 aa8.44□□□□□ -1.06
HDAC6-234ENST00000493923 MFAP3P55082 362 aa8.44□□□□□ -1.06
HDAC6-234ENST00000493923 FKBP3Q00688 224 aaKnown RBP8.44□□□□□ -1.06
HDAC6-234ENST00000493923 ADIGQ0VDE8 80 aa8.44□□□□□ -1.06
HDAC6-234ENST00000493923 PPP1R7Q15435 360 aa8.44□□□□□ -1.06
HDAC6-234ENST00000493923 TSNAXIP1Q2TAA8 658 aa8.44□□□□□ -1.06
HDAC6-234ENST00000493923 IL31Q6EBC2 164 aa8.44□□□□□ -1.06
HDAC6-234ENST00000493923 HIBCHQ6NVY1 386 aaPredicted RBP8.44□□□□□ -1.06
HDAC6-234ENST00000493923 PMF1Q6P1K2 205 aa8.44□□□□□ -1.06
HDAC6-234ENST00000493923 DENND1CQ8IV53 801 aa8.44□□□□□ -1.06
HDAC6-234ENST00000493923 PGBD3Q8N328 593 aa8.44□□□□□ -1.06
HDAC6-234ENST00000493923 ZNF276Q8N554 614 aa8.44□□□□□ -1.06
HDAC6-234ENST00000493923 WFDC5Q8TCV5 224 aa8.44□□□□□ -1.06
HDAC6-234ENST00000493923 FBF1Q8TES7 1133 aa8.44□□□□□ -1.06
HDAC6-234ENST00000493923 TEKT4Q8WW24 435 aa8.44□□□□□ -1.06
HDAC6-234ENST00000493923 CCT6BQ92526 530 aa8.44□□□□□ -1.06
HDAC6-234ENST00000493923 LRRC45Q96CN5 670 aa8.44□□□□□ -1.06
HDAC6-234ENST00000493923 STAMBPL1Q96FJ0 436 aa8.44□□□□□ -1.06
HDAC6-234ENST00000493923 KREMEN1Q96MU8 473 aa8.44□□□□□ -1.06
HDAC6-234ENST00000493923 GSDMAQ96QA5 445 aa8.44□□□□□ -1.06
HDAC6-234ENST00000493923 GABRG3Q99928 467 aa8.44□□□□□ -1.06
HDAC6-234ENST00000493923 IRX2Q9BZI1 471 aaPredicted RBP8.44□□□□□ -1.06
HDAC6-234ENST00000493923 NDST4Q9H3R1 872 aa8.44□□□□□ -1.06
HDAC6-234ENST00000493923 POLMQ9NP87 494 aaPredicted RBP8.44□□□□□ -1.06
HDAC6-234ENST00000493923 CLIC5Q9NZA1 410 aa8.44□□□□□ -1.06
HDAC6-234ENST00000493923 MARCH2Q9P0N8 246 aa8.44□□□□□ -1.06
HDAC6-234ENST00000493923 ATXN10Q9UBB4 475 aa8.44□□□□□ -1.06
HDAC6-234ENST00000493923 ARMCX3Q9UH62 379 aaPredicted RBP8.44□□□□□ -1.06
HDAC6-234ENST00000493923 LSM7Q9UK45 103 aaKnown RBP8.44□□□□□ -1.06
HDAC6-234ENST00000493923 CYP8B1Q9UNU6 501 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms