RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 MX2P20592 715 aa14.09□□□□□ -0.15
VCP-207ENST00000493886 GRIK1P39086 918 aa14.09□□□□□ -0.15
VCP-207ENST00000493886 SLC5A3P53794 718 aa14.09□□□□□ -0.15
VCP-207ENST00000493886 CLLU1OSQ5K130 101 aa14.09□□□□□ -0.15
VCP-207ENST00000493886 CDHR3Q6ZTQ4 885 aa14.09□□□□□ -0.15
VCP-207ENST00000493886 BEND5Q7L4P6 421 aa14.09□□□□□ -0.15
VCP-207ENST00000493886 DEPDC1BQ8WUY9 529 aa14.09□□□□□ -0.15
VCP-207ENST00000493886 LINC01599Q8WXQ3 324 aa14.09□□□□□ -0.15
VCP-207ENST00000493886 ARNTL2Q8WYA1 636 aa14.09□□□□□ -0.15
VCP-207ENST00000493886 HDAC11Q96DB2 347 aa14.09□□□□□ -0.15
VCP-207ENST00000493886 TMEM120AQ9BXJ8 343 aa14.09□□□□□ -0.15
VCP-207ENST00000493886 BRD8Q9H0E9 1235 aa14.09□□□□□ -0.15
VCP-207ENST00000493886 ZNF395Q9H8N7 513 aaPredicted RBP14.09□□□□□ -0.15
VCP-207ENST00000493886 NUP205Q92621 2012 aa14.09□□□□□ -0.15
VCP-207ENST00000493886 MOXD2PA6NHM9 499 aa14.08□□□□□ -0.15
VCP-207ENST00000493886 COPEO14579 308 aa14.08□□□□□ -0.15
VCP-207ENST00000493886 ATP5HO75947 161 aa14.08□□□□□ -0.15
VCP-207ENST00000493886 IGLV3-25P01717 112 aa14.08□□□□□ -0.15
VCP-207ENST00000493886 OR4Q2P0C623 313 aa14.08□□□□□ -0.15
VCP-207ENST00000493886 CALB2P22676 271 aa14.08□□□□□ -0.15
VCP-207ENST00000493886 HOXD10P28358 340 aa14.08□□□□□ -0.15
VCP-207ENST00000493886 SERPINB6P35237 376 aa14.08□□□□□ -0.15
VCP-207ENST00000493886 DSC1Q08554 894 aa14.08□□□□□ -0.15
VCP-207ENST00000493886 GALNT2Q10471 571 aa14.08□□□□□ -0.15
VCP-207ENST00000493886 CD99L2Q8TCZ2 262 aa14.08□□□□□ -0.15
VCP-207ENST00000493886 APBB2Q92870 758 aa14.08□□□□□ -0.15
VCP-207ENST00000493886 MTBPQ96DY7 904 aa14.08□□□□□ -0.15
VCP-207ENST00000493886 TRIM55Q9BYV6 548 aa14.08□□□□□ -0.15
VCP-207ENST00000493886 FRMPD3Q5JV73 1810 aa14.08□□□□□ -0.16
VCP-207ENST00000493886 ALDH1A2O94788 518 aa14.08□□□□□ -0.16
VCP-207ENST00000493886 KITP10721 976 aa14.08□□□□□ -0.16
VCP-207ENST00000493886 GARSP41250 739 aaKnown RBP14.08□□□□□ -0.16
VCP-207ENST00000493886 ARFIP2P53365 341 aa14.08□□□□□ -0.16
VCP-207ENST00000493886 CTC1Q2NKJ3 1217 aa14.08□□□□□ -0.16
VCP-207ENST00000493886 NOMO2Q5JPE7 1267 aa14.08□□□□□ -0.16
VCP-207ENST00000493886 CCNJLQ8IV13 435 aa14.08□□□□□ -0.16
VCP-207ENST00000493886 UNC5BQ8IZJ1 945 aa14.08□□□□□ -0.16
VCP-207ENST00000493886 MAB21L3Q8N8X9 362 aa14.08□□□□□ -0.16
VCP-207ENST00000493886 INPP5DQ92835 1189 aa14.08□□□□□ -0.16
VCP-207ENST00000493886 NAF1Q96HR8 494 aaKnown RBP14.08□□□□□ -0.16
VCP-207ENST00000493886 SRPK1Q96SB4 655 aaKnown RBP14.08□□□□□ -0.16
VCP-207ENST00000493886 SLC13A1Q9BZW2 595 aa14.08□□□□□ -0.16
VCP-207ENST00000493886 NACA2Q9H009 215 aa14.08□□□□□ -0.16
VCP-207ENST00000493886 OSBPL2Q9H1P3 480 aa14.08□□□□□ -0.16
VCP-207ENST00000493886 PATJQ8NI35 1801 aa14.08□□□□□ -0.16
VCP-207ENST00000493886 FAM237BA0A1B0GVD1 139 aa14.08□□□□□ -0.16
VCP-207ENST00000493886 TNFRSF10BO14763 440 aa14.08□□□□□ -0.16
VCP-207ENST00000493886 IRAK2O43187 625 aa14.08□□□□□ -0.16
VCP-207ENST00000493886 RFPL1O75677 317 aa14.08□□□□□ -0.16
VCP-207ENST00000493886 TOP3BO95985 862 aaKnown RBP14.08□□□□□ -0.16
VCP-207ENST00000493886 PGAM1P18669 254 aa14.08□□□□□ -0.16
VCP-207ENST00000493886 PTDSS1P48651 473 aaKnown RBP14.08□□□□□ -0.16
VCP-207ENST00000493886 SERPINB9P50453 376 aa14.08□□□□□ -0.16
VCP-207ENST00000493886 EIF4EBP2Q13542 120 aaPredicted RBP14.08□□□□□ -0.16
VCP-207ENST00000493886 KHDC1Q4VXA5 237 aaKnown RBP14.08□□□□□ -0.16
VCP-207ENST00000493886 BTBD8Q5XKL5 378 aa14.08□□□□□ -0.16
VCP-207ENST00000493886 ALYREFQ86V81 257 aaKnown RBP14.08□□□□□ -0.16
VCP-207ENST00000493886 CHSY1Q86X52 802 aa14.08□□□□□ -0.16
VCP-207ENST00000493886 URGCPQ8TCY9 931 aa14.08□□□□□ -0.16
VCP-207ENST00000493886 DTX3LQ8TDB6 740 aa14.08□□□□□ -0.16
VCP-207ENST00000493886 AGAP3Q96P47 875 aa14.08□□□□□ -0.16
VCP-207ENST00000493886 GORASP1Q9BQQ3 440 aa14.08□□□□□ -0.16
VCP-207ENST00000493886 CADM1Q9BY67 442 aaKnown RBP14.08□□□□□ -0.16
VCP-207ENST00000493886 ABCC13Q9NSE7 274 aa14.08□□□□□ -0.16
VCP-207ENST00000493886 SYBUQ9NX95 663 aa14.08□□□□□ -0.16
VCP-207ENST00000493886 CEP350Q5VT06 3117 aa14.07□□□□□ -0.16
VCP-207ENST00000493886 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.07□□□□□ -0.16
VCP-207ENST00000493886 MTSS1O43312 755 aa14.07□□□□□ -0.16
VCP-207ENST00000493886 PTPN4P29074 926 aa14.07□□□□□ -0.16
VCP-207ENST00000493886 CCNFP41002 786 aa14.07□□□□□ -0.16
VCP-207ENST00000493886 IRX4P78413 519 aa14.07□□□□□ -0.16
VCP-207ENST00000493886 SLC39A12Q504Y0 691 aa14.07□□□□□ -0.16
VCP-207ENST00000493886 COLGALT2Q8IYK4 626 aa14.07□□□□□ -0.16
VCP-207ENST00000493886 RAET1EQ8TD07 263 aa14.07□□□□□ -0.16
VCP-207ENST00000493886 NAT9Q9BTE0 207 aa14.07□□□□□ -0.16
VCP-207ENST00000493886 ARHGEF38Q9NXL2 777 aa14.07□□□□□ -0.16
VCP-207ENST00000493886 HMX2A2RU54 273 aa14.07□□□□□ -0.16
VCP-207ENST00000493886 ZBTB24O43167 697 aaPredicted RBP14.07□□□□□ -0.16
VCP-207ENST00000493886 MYL2P10916 166 aa14.07□□□□□ -0.16
VCP-207ENST00000493886 GNAZP19086 355 aa14.07□□□□□ -0.16
VCP-207ENST00000493886 CYP2C18P33260 490 aa14.07□□□□□ -0.16
VCP-207ENST00000493886 OR1G1P47890 313 aa14.07□□□□□ -0.16
VCP-207ENST00000493886 RASSF2P50749 326 aa14.07□□□□□ -0.16
VCP-207ENST00000493886 FAM189BP81408 668 aa14.07□□□□□ -0.16
VCP-207ENST00000493886 OLIG2Q13516 323 aa14.07□□□□□ -0.16
VCP-207ENST00000493886 MROH9Q5TGP6 573 aa14.07□□□□□ -0.16
VCP-207ENST00000493886 CELF6Q96J87 481 aaKnown RBP14.07□□□□□ -0.16
VCP-207ENST00000493886 SIK2Q9H0K1 926 aa14.07□□□□□ -0.16
VCP-207ENST00000493886 AP2A1O95782 977 aa14.06□□□□□ -0.16
VCP-207ENST00000493886 SRGAP2BP0DMP2 458 aa14.06□□□□□ -0.16
VCP-207ENST00000493886 CD68P34810 354 aaPredicted RBP14.06□□□□□ -0.16
VCP-207ENST00000493886 GJA8P48165 433 aa14.06□□□□□ -0.16
VCP-207ENST00000493886 PGFP49763 221 aa14.06□□□□□ -0.16
VCP-207ENST00000493886 NIPAL4Q0D2K0 466 aa14.06□□□□□ -0.16
VCP-207ENST00000493886 ZBTB17Q13105 803 aa14.06□□□□□ -0.16
VCP-207ENST00000493886 ACBD5Q5T8D3 534 aaPredicted RBP14.06□□□□□ -0.16
VCP-207ENST00000493886 RWDD4Q6NW29 188 aaKnown RBP14.06□□□□□ -0.16
VCP-207ENST00000493886 MARK2Q7KZI7 788 aaKnown RBP14.06□□□□□ -0.16
VCP-207ENST00000493886 SCN4BQ8IWT1 228 aa14.06□□□□□ -0.16
VCP-207ENST00000493886 OR52K1Q8NGK4 314 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms