RNA–Protein interactions for RNA: ENST00000493540.1

CAB39-206, Transcript of calcium binding protein 39, humanhuman

TSL 4

Gene CAB39, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-206ENST00000493540 RCOR1Q9UKL0 485 aa7.31□□□□□ -1.24
CAB39-206ENST00000493540 APOBEC2Q9Y235 224 aaKnown RBP7.31□□□□□ -1.24
CAB39-206ENST00000493540 LRRK2Q5S007 2527 aa7.3□□□□□ -1.24
CAB39-206ENST00000493540 MEI4A8MW99 385 aa7.3□□□□□ -1.24
CAB39-206ENST00000493540 M0R082 166 aa7.3□□□□□ -1.24
CAB39-206ENST00000493540 XPO1O14980 1071 aaKnown RBP7.3□□□□□ -1.24
CAB39-206ENST00000493540 NDUFS2O75306 463 aa7.3□□□□□ -1.24
CAB39-206ENST00000493540 SMNDC1O75940 238 aaKnown RBP eCLIP7.3□□□□□ -1.24
CAB39-206ENST00000493540 ALBP02768 609 aa7.3□□□□□ -1.24
CAB39-206ENST00000493540 ATXN1LP0C7T5 689 aaKnown RBP7.3□□□□□ -1.24
CAB39-206ENST00000493540 TRIM49P0CI25 452 aa7.3□□□□□ -1.24
CAB39-206ENST00000493540 TRIM49CP0CI26 452 aa7.3□□□□□ -1.24
CAB39-206ENST00000493540 ZSCAN22P10073 491 aaPredicted RBP7.3□□□□□ -1.24
CAB39-206ENST00000493540 PFKFB1P16118 471 aa7.3□□□□□ -1.24
CAB39-206ENST00000493540 NR2F2P24468 414 aa7.3□□□□□ -1.24
CAB39-206ENST00000493540 RPL34P49207 117 aaKnown RBP7.3□□□□□ -1.24
CAB39-206ENST00000493540 SGSHP51688 502 aa7.3□□□□□ -1.24
CAB39-206ENST00000493540 VAMP7P51809 220 aa7.3□□□□□ -1.24
CAB39-206ENST00000493540 EIF4EBP2Q13542 120 aaPredicted RBP7.3□□□□□ -1.24
CAB39-206ENST00000493540 PKP1Q13835 747 aa7.3□□□□□ -1.24
CAB39-206ENST00000493540 SHBQ15464 509 aa7.3□□□□□ -1.24
CAB39-206ENST00000493540 COL28A1Q2UY09 1125 aa7.3□□□□□ -1.24
CAB39-206ENST00000493540 EDRF1Q3B7T1 1238 aa7.3□□□□□ -1.24
CAB39-206ENST00000493540 KCNT1Q5JUK3 1230 aa7.3□□□□□ -1.24
CAB39-206ENST00000493540 SDE2Q6IQ49 451 aa7.3□□□□□ -1.24
CAB39-206ENST00000493540 KIAA1324Q6UXG2 1013 aaKnown RBP7.3□□□□□ -1.24
CAB39-206ENST00000493540 USP30Q70CQ3 517 aa7.3□□□□□ -1.24
CAB39-206ENST00000493540 ARHGAP18Q8N392 663 aa7.3□□□□□ -1.24
CAB39-206ENST00000493540 TTC39CQ8N584 583 aa7.3□□□□□ -1.24
CAB39-206ENST00000493540 ANKRD52Q8NB46 1076 aa7.3□□□□□ -1.24
CAB39-206ENST00000493540 ZNF417Q8TAU3 575 aa7.3□□□□□ -1.24
CAB39-206ENST00000493540 MDM1Q8TC05 714 aa7.3□□□□□ -1.24
CAB39-206ENST00000493540 FBF1Q8TES7 1133 aa7.3□□□□□ -1.24
CAB39-206ENST00000493540 SORCS1Q8WY21 1168 aa7.3□□□□□ -1.24
CAB39-206ENST00000493540 KCTD13Q8WZ19 329 aa7.3□□□□□ -1.24
CAB39-206ENST00000493540 PRCCQ92733 491 aaPredicted RBP7.3□□□□□ -1.24
CAB39-206ENST00000493540 BIRC7Q96CA5 298 aa7.3□□□□□ -1.24
CAB39-206ENST00000493540 SIPA1Q96FS4 1042 aa7.3□□□□□ -1.24
CAB39-206ENST00000493540 MRGPRX3Q96LB0 322 aa7.3□□□□□ -1.24
CAB39-206ENST00000493540 PRICKLE1Q96MT3 831 aaPredicted RBP7.3□□□□□ -1.24
CAB39-206ENST00000493540 ZNF396Q96N95 335 aaPredicted RBP7.3□□□□□ -1.24
CAB39-206ENST00000493540 ZNF587Q96SQ5 575 aaPredicted RBP7.3□□□□□ -1.24
CAB39-206ENST00000493540 CDC6Q99741 560 aa7.3□□□□□ -1.24
CAB39-206ENST00000493540 NUP58Q9BVL2 599 aa7.3□□□□□ -1.24
CAB39-206ENST00000493540 NACA2Q9H009 215 aa7.3□□□□□ -1.24
CAB39-206ENST00000493540 RASSF4Q9H2L5 321 aa7.3□□□□□ -1.24
CAB39-206ENST00000493540 CCDC86Q9H6F5 360 aaKnown RBP7.3□□□□□ -1.24
CAB39-206ENST00000493540 TM9SF3Q9HD45 589 aa7.3□□□□□ -1.24
CAB39-206ENST00000493540 NPHS2Q9NP85 383 aa7.3□□□□□ -1.24
CAB39-206ENST00000493540 PRSS16Q9NQE7 514 aa7.3□□□□□ -1.24
CAB39-206ENST00000493540 CISHQ9NSE2 258 aa7.3□□□□□ -1.24
CAB39-206ENST00000493540 OLA1Q9NTK5 396 aaKnown RBP7.3□□□□□ -1.24
CAB39-206ENST00000493540 MARCH2Q9P0N8 246 aa7.3□□□□□ -1.24
CAB39-206ENST00000493540 ADAMTS1Q9UHI8 967 aa7.3□□□□□ -1.24
CAB39-206ENST00000493540 EIF2B4Q9UI10 523 aaKnown RBP7.3□□□□□ -1.24
CAB39-206ENST00000493540 HBS1LQ9Y450 684 aaKnown RBP7.3□□□□□ -1.24
CAB39-206ENST00000493540 PCDHGA1Q9Y5H4 931 aa7.3□□□□□ -1.24
CAB39-206ENST00000493540 DOPEY2Q9Y3R5 2298 aa7.29□□□□□ -1.24
CAB39-206ENST00000493540 A0A1B0GVT2 93 aa7.29□□□□□ -1.24
CAB39-206ENST00000493540 A0A1W2PP55 124 aa7.29□□□□□ -1.24
CAB39-206ENST00000493540 A0A1W2PR77 199 aa7.29□□□□□ -1.24
CAB39-206ENST00000493540 TULP2O00295 520 aa7.29□□□□□ -1.24
CAB39-206ENST00000493540 O00370 1275 aa7.29□□□□□ -1.24
CAB39-206ENST00000493540 VILLO15195 856 aa7.29□□□□□ -1.24
CAB39-206ENST00000493540 PMM2O15305 246 aa7.29□□□□□ -1.24
CAB39-206ENST00000493540 TNFSF14O43557 240 aa7.29□□□□□ -1.24
CAB39-206ENST00000493540 LATO43561 262 aa7.29□□□□□ -1.24
CAB39-206ENST00000493540 TIMM44O43615 452 aa7.29□□□□□ -1.24
CAB39-206ENST00000493540 C1QL1O75973 258 aa7.29□□□□□ -1.24
CAB39-206ENST00000493540 ZBED1O96006 694 aa7.29□□□□□ -1.24
CAB39-206ENST00000493540 DLDP09622 509 aaKnown RBP7.29□□□□□ -1.24
CAB39-206ENST00000493540 RALAP11233 206 aa7.29□□□□□ -1.24
CAB39-206ENST00000493540 CMA1P23946 247 aa7.29□□□□□ -1.24
CAB39-206ENST00000493540 CD27P26842 260 aa7.29□□□□□ -1.24
CAB39-206ENST00000493540 RDXP35241 583 aaKnown RBP7.29□□□□□ -1.24
CAB39-206ENST00000493540 GRK6P43250 576 aa7.29□□□□□ -1.24
CAB39-206ENST00000493540 AFMP43652 599 aa7.29□□□□□ -1.24
CAB39-206ENST00000493540 GCLMP48507 274 aa7.29□□□□□ -1.24
CAB39-206ENST00000493540 MXI1P50539 228 aa7.29□□□□□ -1.24
CAB39-206ENST00000493540 CCT8P50990 548 aa7.29□□□□□ -1.24
CAB39-206ENST00000493540 BCAT1P54687 386 aa7.29□□□□□ -1.24
CAB39-206ENST00000493540 YWHAGP61981 247 aaKnown RBP eCLIP7.29□□□□□ -1.24
CAB39-206ENST00000493540 RPS14P62263 151 aaKnown RBP7.29□□□□□ -1.24
CAB39-206ENST00000493540 ATP11AP98196 1134 aa7.29□□□□□ -1.24
CAB39-206ENST00000493540 KIF19Q2TAC6 998 aa7.29□□□□□ -1.24
CAB39-206ENST00000493540 MPPE1Q53F39 396 aa7.29□□□□□ -1.24
CAB39-206ENST00000493540 ADGRF1Q5T601 910 aa7.29□□□□□ -1.24
CAB39-206ENST00000493540 CEP135Q66GS9 1140 aa7.29□□□□□ -1.24
CAB39-206ENST00000493540 KRT39Q6A163 491 aa7.29□□□□□ -1.24
CAB39-206ENST00000493540 DENND1CQ8IV53 801 aa7.29□□□□□ -1.24
CAB39-206ENST00000493540 AHI1Q8N157 1196 aa7.29□□□□□ -1.24
CAB39-206ENST00000493540 CACTIN-AS1Q8N1I8 211 aa7.29□□□□□ -1.24
CAB39-206ENST00000493540 GALNT15Q8N3T1 639 aa7.29□□□□□ -1.24
CAB39-206ENST00000493540 PNPLA1Q8N8W4 532 aa7.29□□□□□ -1.24
CAB39-206ENST00000493540 FBXL13Q8NEE6 735 aa7.29□□□□□ -1.24
CAB39-206ENST00000493540 SPATA20Q8TB22 786 aa7.29□□□□□ -1.24
CAB39-206ENST00000493540 EPS8L3Q8TE67 593 aaKnown RBP7.29□□□□□ -1.24
CAB39-206ENST00000493540 UCMAQ8WVF2 138 aa7.29□□□□□ -1.24
CAB39-206ENST00000493540 RFFLQ8WZ73 363 aa7.29□□□□□ -1.24
CAB39-206ENST00000493540 AZIN2Q96A70 460 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms