RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 KLHDC7BQ96G42 594 aa18.22■□□□□ 0.51
NUP50-218ENST00000493456 DEPDC7Q96QD5 511 aa18.22■□□□□ 0.51
NUP50-218ENST00000493456 PREBQ9HCU5 417 aa18.22■□□□□ 0.51
NUP50-218ENST00000493456 PCDHB1Q9Y5F3 818 aa18.22■□□□□ 0.51
NUP50-218ENST00000493456 MYO18BQ8IUG5 2567 aa18.21■□□□□ 0.51
NUP50-218ENST00000493456 C1QTNF3-AMACRE9PGA6 284 aa18.21■□□□□ 0.51
NUP50-218ENST00000493456 ALOX15BO15296 676 aa18.21■□□□□ 0.51
NUP50-218ENST00000493456 VAV1P15498 845 aa18.21■□□□□ 0.51
NUP50-218ENST00000493456 TACR2P21452 398 aa18.21■□□□□ 0.51
NUP50-218ENST00000493456 DGKAP23743 735 aa18.21■□□□□ 0.51
NUP50-218ENST00000493456 NDUFA8P51970 172 aa18.21■□□□□ 0.51
NUP50-218ENST00000493456 METAP1P53582 386 aa18.21■□□□□ 0.51
NUP50-218ENST00000493456 OXCT1P55809 520 aa18.21■□□□□ 0.51
NUP50-218ENST00000493456 TTC39BQ5VTQ0 682 aaPredicted RBP18.21■□□□□ 0.51
NUP50-218ENST00000493456 CDCP2Q5VXM1 449 aa18.21■□□□□ 0.51
NUP50-218ENST00000493456 RAP1GAP2Q684P5 730 aa18.21■□□□□ 0.51
NUP50-218ENST00000493456 TAC4Q86UU9 113 aa18.21■□□□□ 0.51
NUP50-218ENST00000493456 SLC25A45Q8N413 288 aa18.21■□□□□ 0.51
NUP50-218ENST00000493456 TMEM145Q8NBT3 493 aa18.21■□□□□ 0.51
NUP50-218ENST00000493456 FRS2Q8WU20 508 aa18.21■□□□□ 0.51
NUP50-218ENST00000493456 FAM149B1Q96BN6 582 aa18.21■□□□□ 0.51
NUP50-218ENST00000493456 BTN2A3PQ96KV6 586 aa18.21■□□□□ 0.51
NUP50-218ENST00000493456 MIS12Q9H081 205 aa18.21■□□□□ 0.51
NUP50-218ENST00000493456 XPO7Q9UIA9 1087 aaKnown RBP18.21■□□□□ 0.51
NUP50-218ENST00000493456 NAALADL1Q9UQQ1 740 aa18.21■□□□□ 0.51
NUP50-218ENST00000493456 F5H5T6 163 aa18.2■□□□□ 0.5
NUP50-218ENST00000493456 GP1BAP07359 652 aa18.2■□□□□ 0.5
NUP50-218ENST00000493456 ALPPL2P10696 532 aa18.2■□□□□ 0.5
NUP50-218ENST00000493456 CKMT1AP12532 417 aa18.2■□□□□ 0.5
NUP50-218ENST00000493456 PLK1P53350 603 aa18.2■□□□□ 0.5
NUP50-218ENST00000493456 GABREP78334 506 aa18.2■□□□□ 0.5
NUP50-218ENST00000493456 KRBA2Q6ZNG9 492 aa18.2■□□□□ 0.5
NUP50-218ENST00000493456 NAF1Q96HR8 494 aaKnown RBP18.2■□□□□ 0.5
NUP50-218ENST00000493456 PPP1R9BQ96SB3 815 aa18.2■□□□□ 0.5
NUP50-218ENST00000493456 ZSWIM1Q9BR11 485 aa18.2■□□□□ 0.5
NUP50-218ENST00000493456 DPH1Q9BZG8 443 aa18.2■□□□□ 0.5
NUP50-218ENST00000493456 EVA1BQ9NVM1 165 aa18.2■□□□□ 0.5
NUP50-218ENST00000493456 KLHL11Q9NVR0 708 aa18.2■□□□□ 0.5
NUP50-218ENST00000493456 SARDHQ9UL12 918 aa18.2■□□□□ 0.5
NUP50-218ENST00000493456 PCDHB4Q9Y5E5 795 aa18.2■□□□□ 0.5
NUP50-218ENST00000493456 COL6A6A6NMZ7 2263 aa18.2■□□□□ 0.5
NUP50-218ENST00000493456 A0A1B0GVM2 712 aa18.19■□□□□ 0.5
NUP50-218ENST00000493456 TCAF2A6NFQ2 919 aa18.19■□□□□ 0.5
NUP50-218ENST00000493456 ATP9BO43861 1147 aa18.19■□□□□ 0.5
NUP50-218ENST00000493456 OPA1O60313 960 aa18.19■□□□□ 0.5
NUP50-218ENST00000493456 MPOP05164 745 aa18.19■□□□□ 0.5
NUP50-218ENST00000493456 HSP90AA1P07900 732 aaKnown RBP18.19■□□□□ 0.5
NUP50-218ENST00000493456 THEGLP0DJG4 465 aa18.19■□□□□ 0.5
NUP50-218ENST00000493456 PDGFRAP16234 1089 aa18.19■□□□□ 0.5
NUP50-218ENST00000493456 BRD2P25440 801 aaKnown RBP18.19■□□□□ 0.5
NUP50-218ENST00000493456 LSSP48449 732 aa18.19■□□□□ 0.5
NUP50-218ENST00000493456 RPL34P49207 117 aaKnown RBP18.19■□□□□ 0.5
NUP50-218ENST00000493456 FKBP3Q00688 224 aaKnown RBP18.19■□□□□ 0.5
NUP50-218ENST00000493456 KCNMA1Q12791 1236 aa18.19■□□□□ 0.5
NUP50-218ENST00000493456 CNTN1Q12860 1018 aa18.19■□□□□ 0.5
NUP50-218ENST00000493456 LRMPQ12912 555 aa18.19■□□□□ 0.5
NUP50-218ENST00000493456 PKP1Q13835 747 aa18.19■□□□□ 0.5
NUP50-218ENST00000493456 ARHGAP40Q5TG30 622 aa18.19■□□□□ 0.5
NUP50-218ENST00000493456 SMYD4Q8IYR2 804 aaPredicted RBP18.19■□□□□ 0.5
NUP50-218ENST00000493456 CCAR2Q8N163 923 aaKnown RBP18.19■□□□□ 0.5
NUP50-218ENST00000493456 SNRNP27Q8WVK2 155 aaKnown RBP18.19■□□□□ 0.5
NUP50-218ENST00000493456 KCNE4Q8WWG9 221 aa18.19■□□□□ 0.5
NUP50-218ENST00000493456 ERCC4Q92889 916 aaPredicted RBP18.19■□□□□ 0.5
NUP50-218ENST00000493456 SNX21Q969T3 373 aa18.19■□□□□ 0.5
NUP50-218ENST00000493456 SLC35C1Q96A29 364 aa18.19■□□□□ 0.5
NUP50-218ENST00000493456 SPATA32Q96LK8 384 aa18.19■□□□□ 0.5
NUP50-218ENST00000493456 TSG101Q99816 390 aa18.19■□□□□ 0.5
NUP50-218ENST00000493456 POLR1BQ9H9Y6 1135 aa18.19■□□□□ 0.5
NUP50-218ENST00000493456 USP29Q9HBJ7 922 aa18.19■□□□□ 0.5
NUP50-218ENST00000493456 CPNE5Q9HCH3 593 aa18.19■□□□□ 0.5
NUP50-218ENST00000493456 THSD1Q9NS62 852 aa18.19■□□□□ 0.5
NUP50-218ENST00000493456 ARMCX3Q9UH62 379 aaPredicted RBP18.19■□□□□ 0.5
NUP50-218ENST00000493456 SLC25A13Q9UJS0 675 aa18.19■□□□□ 0.5
NUP50-218ENST00000493456 PPM1HQ9ULR3 514 aa18.19■□□□□ 0.5
NUP50-218ENST00000493456 BOD1L1Q8NFC6 3051 aa18.18■□□□□ 0.5
NUP50-218ENST00000493456 MCF2LO15068 1137 aa18.18■□□□□ 0.5
NUP50-218ENST00000493456 USP12O75317 370 aa18.18■□□□□ 0.5
NUP50-218ENST00000493456 ACADSBP45954 432 aa18.18■□□□□ 0.5
NUP50-218ENST00000493456 ZC3H12AQ5D1E8 599 aaKnown RBP18.18■□□□□ 0.5
NUP50-218ENST00000493456 RABGAP1LQ5R372 815 aa18.18■□□□□ 0.5
NUP50-218ENST00000493456 NEK5Q6P3R8 708 aa18.18■□□□□ 0.5
NUP50-218ENST00000493456 ATP6V0D2Q8N8Y2 350 aa18.18■□□□□ 0.5
NUP50-218ENST00000493456 CCDC34Q96HJ3 373 aa18.18■□□□□ 0.5
NUP50-218ENST00000493456 NT5C1BQ96P26 610 aa18.18■□□□□ 0.5
NUP50-218ENST00000493456 ST7Q9NRC1 585 aa18.18■□□□□ 0.5
NUP50-218ENST00000493456 UCKL1Q9NWZ5 548 aa18.18■□□□□ 0.5
NUP50-218ENST00000493456 NLGN3Q9NZ94 848 aa18.18■□□□□ 0.5
NUP50-218ENST00000493456 SLC12A6Q9UHW9 1150 aa18.18■□□□□ 0.5
NUP50-218ENST00000493456 CA5BQ9Y2D0 317 aa18.18■□□□□ 0.5
NUP50-218ENST00000493456 FFAR2O15552 330 aa18.17■□□□□ 0.5
NUP50-218ENST00000493456 LZTS3O60299 673 aaPredicted RBP18.17■□□□□ 0.5
NUP50-218ENST00000493456 CSO75390 466 aaKnown RBP18.17■□□□□ 0.5
NUP50-218ENST00000493456 IGLV3-25P01717 112 aa18.17■□□□□ 0.5
NUP50-218ENST00000493456 C6P13671 934 aa18.17■□□□□ 0.5
NUP50-218ENST00000493456 ZNF18P17022 549 aa18.17■□□□□ 0.5
NUP50-218ENST00000493456 DUSP3P51452 185 aaPredicted RBP18.17■□□□□ 0.5
NUP50-218ENST00000493456 CCDC15Q0P6D6 951 aa18.17■□□□□ 0.5
NUP50-218ENST00000493456 ACCSLQ4AC99 568 aa18.17■□□□□ 0.5
NUP50-218ENST00000493456 CXorf57Q6NSI4 855 aaKnown RBP18.17■□□□□ 0.5
NUP50-218ENST00000493456 IGF2-ASQ6U949 168 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms