RNA–Protein interactions for RNA: ENST00000493356.5

PFDN4-205, Transcript of prefoldin subunit 4, humanhuman

TSL 3

Gene PFDN4, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-205ENST00000493356 PDGFRAP16234 1089 aa22.12■■□□□ 1.13
PFDN4-205ENST00000493356 ACTN2P35609 894 aa22.12■■□□□ 1.13
PFDN4-205ENST00000493356 GPD2P43304 727 aa22.12■■□□□ 1.13
PFDN4-205ENST00000493356 NUCB2P80303 420 aa22.12■■□□□ 1.13
PFDN4-205ENST00000493356 TLE3Q04726 772 aa22.12■■□□□ 1.13
PFDN4-205ENST00000493356 LRRC63Q05C16 580 aa22.12■■□□□ 1.13
PFDN4-205ENST00000493356 SULT2A1Q06520 285 aa22.12■■□□□ 1.13
PFDN4-205ENST00000493356 GPR155Q7Z3F1 870 aa22.12■■□□□ 1.13
PFDN4-205ENST00000493356 TRIM69Q86WT6 500 aa22.12■■□□□ 1.13
PFDN4-205ENST00000493356 ERICH1Q86X53 443 aa22.12■■□□□ 1.13
PFDN4-205ENST00000493356 CCDC34Q96HJ3 373 aa22.12■■□□□ 1.13
PFDN4-205ENST00000493356 SCAND2PQ9GZW5 306 aaPredicted RBP22.12■■□□□ 1.13
PFDN4-205ENST00000493356 TEX51A0A1B0GUA7 166 aa22.11■■□□□ 1.13
PFDN4-205ENST00000493356 F5H5T6 163 aa22.11■■□□□ 1.13
PFDN4-205ENST00000493356 TRIM38O00635 465 aa22.11■■□□□ 1.13
PFDN4-205ENST00000493356 CAPN9O14815 690 aa22.11■■□□□ 1.13
PFDN4-205ENST00000493356 SIGLEC6O43699 453 aa22.11■■□□□ 1.13
PFDN4-205ENST00000493356 IGLV3-25P01717 112 aa22.11■■□□□ 1.13
PFDN4-205ENST00000493356 PLK1P53350 603 aa22.11■■□□□ 1.13
PFDN4-205ENST00000493356 CCDC173Q0VFZ6 552 aa22.11■■□□□ 1.13
PFDN4-205ENST00000493356 STAT4Q14765 748 aa22.11■■□□□ 1.13
PFDN4-205ENST00000493356 TBC1D25Q3MII6 688 aa22.11■■□□□ 1.13
PFDN4-205ENST00000493356 AGBL4Q5VU57 503 aa22.11■■□□□ 1.13
PFDN4-205ENST00000493356 DSG4Q86SJ6 1040 aa22.11■■□□□ 1.13
PFDN4-205ENST00000493356 CIR1Q86X95 450 aaPredicted RBP22.11■■□□□ 1.13
PFDN4-205ENST00000493356 CCAR2Q8N163 923 aaKnown RBP22.11■■□□□ 1.13
PFDN4-205ENST00000493356 LMO3Q8TAP4 145 aa22.11■■□□□ 1.13
PFDN4-205ENST00000493356 OR8D1Q8WZ84 308 aa22.11■■□□□ 1.13
PFDN4-205ENST00000493356 PRMT1Q99873 361 aaKnown RBP22.11■■□□□ 1.13
PFDN4-205ENST00000493356 TRIM62Q9BVG3 475 aa22.11■■□□□ 1.13
PFDN4-205ENST00000493356 METTL14Q9HCE5 456 aaKnown RBP22.11■■□□□ 1.13
PFDN4-205ENST00000493356 TRUB2O95900 331 aaKnown RBP22.1■■□□□ 1.13
PFDN4-205ENST00000493356 ACADSBP45954 432 aa22.1■■□□□ 1.13
PFDN4-205ENST00000493356 PITX1P78337 314 aaPredicted RBP22.1■■□□□ 1.13
PFDN4-205ENST00000493356 CNTN1Q12860 1018 aa22.1■■□□□ 1.13
PFDN4-205ENST00000493356 ZNF211Q13398 564 aaPredicted RBP22.1■■□□□ 1.13
PFDN4-205ENST00000493356 FAM46CQ5VWP2 391 aa22.1■■□□□ 1.13
PFDN4-205ENST00000493356 CXorf57Q6NSI4 855 aaKnown RBP22.1■■□□□ 1.13
PFDN4-205ENST00000493356 RRAGAQ7L523 313 aa22.1■■□□□ 1.13
PFDN4-205ENST00000493356 SPACA3Q8IXA5 215 aa22.1■■□□□ 1.13
PFDN4-205ENST00000493356 SLC25A45Q8N413 288 aa22.1■■□□□ 1.13
PFDN4-205ENST00000493356 ZNF843Q8N446 348 aa22.1■■□□□ 1.13
PFDN4-205ENST00000493356 GSDMAQ96QA5 445 aa22.1■■□□□ 1.13
PFDN4-205ENST00000493356 CA5BQ9Y2D0 317 aa22.1■■□□□ 1.13
PFDN4-205ENST00000493356 KCNU1A8MYU2 1149 aa22.09■■□□□ 1.13
PFDN4-205ENST00000493356 PRAMEF26H0Y7S4 382 aa22.09■■□□□ 1.13
PFDN4-205ENST00000493356 MT-CO3P00414 261 aa22.09■■□□□ 1.13
PFDN4-205ENST00000493356 PLA2G2AP14555 144 aa22.09■■□□□ 1.13
PFDN4-205ENST00000493356 VASPP50552 380 aaPredicted RBP22.09■■□□□ 1.13
PFDN4-205ENST00000493356 E2F1Q01094 437 aa22.09■■□□□ 1.13
PFDN4-205ENST00000493356 EIF4EBP2Q13542 120 aaPredicted RBP22.09■■□□□ 1.13
PFDN4-205ENST00000493356 POM121L1PQ3SYA9 428 aa22.09■■□□□ 1.13
PFDN4-205ENST00000493356 SETMARQ53H47 684 aaPredicted RBP22.09■■□□□ 1.13
PFDN4-205ENST00000493356 PCSK4Q6UW60 755 aa22.09■■□□□ 1.13
PFDN4-205ENST00000493356 KDM7AQ6ZMT4 941 aa22.09■■□□□ 1.13
PFDN4-205ENST00000493356 ARHGEF19Q8IW93 802 aa22.09■■□□□ 1.13
PFDN4-205ENST00000493356 ATP6V0D2Q8N8Y2 350 aa22.09■■□□□ 1.13
PFDN4-205ENST00000493356 SLC4A5Q9BY07 1137 aa22.09■■□□□ 1.13
PFDN4-205ENST00000493356 POPDC2Q9HBU9 364 aa22.09■■□□□ 1.13
PFDN4-205ENST00000493356 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.09■■□□□ 1.13
PFDN4-205ENST00000493356 PPM1HQ9ULR3 514 aa22.09■■□□□ 1.13
PFDN4-205ENST00000493356 A0A1B0GVM2 712 aa22.08■■□□□ 1.13
PFDN4-205ENST00000493356 TCAF2A6NFQ2 919 aa22.08■■□□□ 1.13
PFDN4-205ENST00000493356 ATP9BO43861 1147 aa22.08■■□□□ 1.13
PFDN4-205ENST00000493356 GCNT1Q02742 428 aa22.08■■□□□ 1.13
PFDN4-205ENST00000493356 ACCSLQ4AC99 568 aa22.08■■□□□ 1.13
PFDN4-205ENST00000493356 TTC39BQ5VTQ0 682 aaPredicted RBP22.08■■□□□ 1.13
PFDN4-205ENST00000493356 DENND1BQ6P3S1 775 aa22.08■■□□□ 1.13
PFDN4-205ENST00000493356 ZNF605Q86T29 641 aa22.08■■□□□ 1.13
PFDN4-205ENST00000493356 STK32AQ8WU08 396 aa22.08■■□□□ 1.13
PFDN4-205ENST00000493356 ERCC4Q92889 916 aaPredicted RBP22.08■■□□□ 1.13
PFDN4-205ENST00000493356 COL26A1Q96A83 441 aa22.08■■□□□ 1.13
PFDN4-205ENST00000493356 ALG14Q96F25 216 aa22.08■■□□□ 1.13
PFDN4-205ENST00000493356 KLHDC7BQ96G42 594 aa22.08■■□□□ 1.13
PFDN4-205ENST00000493356 PCDHB1Q9Y5F3 818 aa22.08■■□□□ 1.13
PFDN4-205ENST00000493356 TDRD6O60522 2096 aaKnown RBP22.08■■□□□ 1.12
PFDN4-205ENST00000493356 E5RJQ4 531 aa22.07■■□□□ 1.12
PFDN4-205ENST00000493356 C1QTNF3-AMACRE9PGA6 284 aa22.07■■□□□ 1.12
PFDN4-205ENST00000493356 MCF2LO15068 1137 aa22.07■■□□□ 1.12
PFDN4-205ENST00000493356 DGKAP23743 735 aa22.07■■□□□ 1.12
PFDN4-205ENST00000493356 OXCT1P55809 520 aa22.07■■□□□ 1.12
PFDN4-205ENST00000493356 TAS2R38P59533 333 aa22.07■■□□□ 1.12
PFDN4-205ENST00000493356 YWHAZP63104 245 aaKnown RBP22.07■■□□□ 1.12
PFDN4-205ENST00000493356 CXADRP78310 365 aa22.07■■□□□ 1.12
PFDN4-205ENST00000493356 DAB2P98082 770 aa22.07■■□□□ 1.12
PFDN4-205ENST00000493356 CETN1Q12798 172 aa22.07■■□□□ 1.12
PFDN4-205ENST00000493356 RABGAP1LQ5R372 815 aa22.07■■□□□ 1.12
PFDN4-205ENST00000493356 FMR1NBQ8N0W7 255 aaPredicted RBP22.07■■□□□ 1.12
PFDN4-205ENST00000493356 TMEM145Q8NBT3 493 aa22.07■■□□□ 1.12
PFDN4-205ENST00000493356 OR4C6Q8NH72 309 aa22.07■■□□□ 1.12
PFDN4-205ENST00000493356 KREMEN1Q96MU8 473 aa22.07■■□□□ 1.12
PFDN4-205ENST00000493356 GDPD2Q9HCC8 539 aa22.07■■□□□ 1.12
PFDN4-205ENST00000493356 PREBQ9HCU5 417 aa22.07■■□□□ 1.12
PFDN4-205ENST00000493356 UCKL1Q9NWZ5 548 aa22.07■■□□□ 1.12
PFDN4-205ENST00000493356 SLC12A6Q9UHW9 1150 aa22.07■■□□□ 1.12
PFDN4-205ENST00000493356 SLC25A13Q9UJS0 675 aa22.07■■□□□ 1.12
PFDN4-205ENST00000493356 CNTN6Q9UQ52 1028 aa22.07■■□□□ 1.12
PFDN4-205ENST00000493356 ALOX15BO15296 676 aa22.06■■□□□ 1.12
PFDN4-205ENST00000493356 P4HA2O15460 535 aa22.06■■□□□ 1.12
PFDN4-205ENST00000493356 CENPCQ03188 943 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms