RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 MAGEA10P43363 369 aaPredicted RBP16.58■□□□□ 0.24
BRAT1-206ENST00000493232 C15orf52Q6ZUT6 534 aaKnown RBP16.58■□□□□ 0.24
BRAT1-206ENST00000493232 LRRC49Q8IUZ0 686 aa16.58■□□□□ 0.24
BRAT1-206ENST00000493232 PSTKQ8IV42 348 aaKnown RBP16.58■□□□□ 0.24
BRAT1-206ENST00000493232 EIF1ADQ8N9N8 165 aaKnown RBP16.58■□□□□ 0.24
BRAT1-206ENST00000493232 NKX2-3Q8TAU0 364 aa16.58■□□□□ 0.24
BRAT1-206ENST00000493232 UTP15Q8TED0 518 aaKnown RBP16.58■□□□□ 0.24
BRAT1-206ENST00000493232 UBE2E3Q969T4 207 aa16.58■□□□□ 0.24
BRAT1-206ENST00000493232 TINF2Q9BSI4 451 aa16.58■□□□□ 0.24
BRAT1-206ENST00000493232 POMKQ9H5K3 350 aa16.58■□□□□ 0.24
BRAT1-206ENST00000493232 CXorf56Q9H5V9 222 aa16.58■□□□□ 0.24
BRAT1-206ENST00000493232 CDH9Q9ULB4 789 aa16.58■□□□□ 0.24
BRAT1-206ENST00000493232 TMEM150BA6NC51 233 aa16.58■□□□□ 0.24
BRAT1-206ENST00000493232 FAM20BO75063 409 aa16.58■□□□□ 0.24
BRAT1-206ENST00000493232 KRT75O95678 551 aa16.58■□□□□ 0.24
BRAT1-206ENST00000493232 FAM58BPP0C7Q3 252 aa16.58■□□□□ 0.24
BRAT1-206ENST00000493232 RBL1P28749 1068 aa16.58■□□□□ 0.24
BRAT1-206ENST00000493232 NOS3P29474 1203 aa16.58■□□□□ 0.24
BRAT1-206ENST00000493232 PRKCIP41743 596 aa16.58■□□□□ 0.24
BRAT1-206ENST00000493232 MAPK9P45984 424 aa16.58■□□□□ 0.24
BRAT1-206ENST00000493232 SAMD4BQ5PRF9 694 aaKnown RBP16.58■□□□□ 0.24
BRAT1-206ENST00000493232 FBXL19Q6PCT2 694 aa16.58■□□□□ 0.24
BRAT1-206ENST00000493232 ETNPPLQ8TBG4 499 aa16.58■□□□□ 0.24
BRAT1-206ENST00000493232 TMEM79Q9BSE2 394 aa16.58■□□□□ 0.24
BRAT1-206ENST00000493232 MRPL17Q9NRX2 175 aaKnown RBP16.58■□□□□ 0.24
BRAT1-206ENST00000493232 A0A0A0MRY4 1105 aa16.57■□□□□ 0.24
BRAT1-206ENST00000493232 ZNF862O60290 1169 aa16.57■□□□□ 0.24
BRAT1-206ENST00000493232 ANXA6P08133 673 aa16.57■□□□□ 0.24
BRAT1-206ENST00000493232 ACSM2AQ08AH3 577 aa16.57■□□□□ 0.24
BRAT1-206ENST00000493232 CBWD6Q4V339 395 aa16.57■□□□□ 0.24
BRAT1-206ENST00000493232 ACSM2BQ68CK6 577 aa16.57■□□□□ 0.24
BRAT1-206ENST00000493232 ZNF655Q8N720 491 aaPredicted RBP16.57■□□□□ 0.24
BRAT1-206ENST00000493232 USP6NLQ92738 828 aa16.57■□□□□ 0.24
BRAT1-206ENST00000493232 SPATA13Q96N96 652 aa16.57■□□□□ 0.24
BRAT1-206ENST00000493232 GDF3Q9NR23 364 aa16.57■□□□□ 0.24
BRAT1-206ENST00000493232 ETNK2Q9NVF9 386 aa16.57■□□□□ 0.24
BRAT1-206ENST00000493232 ZNF112Q9UJU3 913 aa16.57■□□□□ 0.24
BRAT1-206ENST00000493232 FMO4P31512 558 aa16.57■□□□□ 0.24
BRAT1-206ENST00000493232 S100A3P33764 101 aa16.57■□□□□ 0.24
BRAT1-206ENST00000493232 XRCC4Q13426 336 aa16.57■□□□□ 0.24
BRAT1-206ENST00000493232 FRG1Q14331 258 aaKnown RBP16.57■□□□□ 0.24
BRAT1-206ENST00000493232 TYW3Q6IPR3 259 aaKnown RBP16.57■□□□□ 0.24
BRAT1-206ENST00000493232 NEPROQ6NW34 567 aa16.57■□□□□ 0.24
BRAT1-206ENST00000493232 RNFT2Q96EX2 444 aa16.57■□□□□ 0.24
BRAT1-206ENST00000493232 HGH1Q9BTY7 390 aa16.57■□□□□ 0.24
BRAT1-206ENST00000493232 ENTPD4Q9Y227 616 aa16.57■□□□□ 0.24
BRAT1-206ENST00000493232 SLC15A5A6NIM6 579 aa16.57■□□□□ 0.24
BRAT1-206ENST00000493232 CD3EAPO15446 510 aaKnown RBP16.57■□□□□ 0.24
BRAT1-206ENST00000493232 NPR3P17342 541 aa16.57■□□□□ 0.24
BRAT1-206ENST00000493232 NKAPQ8N5F7 415 aaKnown RBP16.57■□□□□ 0.24
BRAT1-206ENST00000493232 ZNF558Q96NG5 402 aa16.57■□□□□ 0.24
BRAT1-206ENST00000493232 SEPHS2Q99611 448 aa16.57■□□□□ 0.24
BRAT1-206ENST00000493232 ROGDIQ9GZN7 287 aa16.57■□□□□ 0.24
BRAT1-206ENST00000493232 KCNMB3Q9NPA1 279 aa16.57■□□□□ 0.24
BRAT1-206ENST00000493232 FAAP100Q0VG06 881 aa16.57■□□□□ 0.24
BRAT1-206ENST00000493232 TBX2Q13207 712 aaPredicted RBP16.57■□□□□ 0.24
BRAT1-206ENST00000493232 METTL3Q86U44 580 aaKnown RBP16.57■□□□□ 0.24
BRAT1-206ENST00000493232 DNAAF5Q86Y56 855 aa16.57■□□□□ 0.24
BRAT1-206ENST00000493232 INPP4BO15327 924 aa16.56■□□□□ 0.24
BRAT1-206ENST00000493232 ME2P23368 584 aa16.56■□□□□ 0.24
BRAT1-206ENST00000493232 GTF2BQ00403 316 aa16.56■□□□□ 0.24
BRAT1-206ENST00000493232 VGLL4Q14135 290 aa16.56■□□□□ 0.24
BRAT1-206ENST00000493232 HECTD3Q5T447 861 aa16.56■□□□□ 0.24
BRAT1-206ENST00000493232 WDR36Q8NI36 951 aaKnown RBP16.56■□□□□ 0.24
BRAT1-206ENST00000493232 ARL15Q9NXU5 204 aa16.56■□□□□ 0.24
BRAT1-206ENST00000493232 COPG2Q9UBF2 871 aa16.56■□□□□ 0.24
BRAT1-206ENST00000493232 OR12D3Q9UGF7 316 aa16.56■□□□□ 0.24
BRAT1-206ENST00000493232 RAB21Q9UL25 225 aa16.56■□□□□ 0.24
BRAT1-206ENST00000493232 TRIM17Q9Y577 477 aa16.56■□□□□ 0.24
BRAT1-206ENST00000493232 SF3B1O75533 1304 aaKnown RBP eCLIP16.56■□□□□ 0.244e-18■■■■■ 149.3
BRAT1-206ENST00000493232 ZNF844Q08AG5 666 aa16.56■□□□□ 0.24
BRAT1-206ENST00000493232 SYT12Q8IV01 421 aa16.56■□□□□ 0.24
BRAT1-206ENST00000493232 SPATA20Q8TB22 786 aa16.56■□□□□ 0.24
BRAT1-206ENST00000493232 ATL1Q8WXF7 558 aa16.56■□□□□ 0.24
BRAT1-206ENST00000493232 SMAD5Q99717 465 aaKnown RBP16.56■□□□□ 0.24
BRAT1-206ENST00000493232 PDGFDQ9GZP0 370 aaPredicted RBP16.56■□□□□ 0.24
BRAT1-206ENST00000493232 CD248Q9HCU0 757 aa16.56■□□□□ 0.24
BRAT1-206ENST00000493232 AKAP7Q9P0M2 348 aaPredicted RBP16.56■□□□□ 0.24
BRAT1-206ENST00000493232 DNMT3LQ9UJW3 386 aa16.56■□□□□ 0.24
BRAT1-206ENST00000493232 TRAV19A0A0A6YYK7 116 aa16.56■□□□□ 0.24
BRAT1-206ENST00000493232 KPNA5O15131 536 aa16.56■□□□□ 0.24
BRAT1-206ENST00000493232 PSMD10O75832 226 aa16.56■□□□□ 0.24
BRAT1-206ENST00000493232 HSMCR30P0CW71 290 aa16.56■□□□□ 0.24
BRAT1-206ENST00000493232 PAICSP22234 425 aaKnown RBP16.56■□□□□ 0.24
BRAT1-206ENST00000493232 SCNN1GP51170 649 aa16.56■□□□□ 0.24
BRAT1-206ENST00000493232 ZNF143P52747 638 aaPredicted RBP16.56■□□□□ 0.24
BRAT1-206ENST00000493232 SNRPD1P62314 119 aaKnown RBP16.56■□□□□ 0.24
BRAT1-206ENST00000493232 MRPS6P82932 125 aaKnown RBP16.56■□□□□ 0.24
BRAT1-206ENST00000493232 CYP20A1Q6UW02 462 aa16.56■□□□□ 0.24
BRAT1-206ENST00000493232 PIF1Q9H611 641 aa16.56■□□□□ 0.24
BRAT1-206ENST00000493232 LIMD1Q9UGP4 676 aa16.56■□□□□ 0.24
BRAT1-206ENST00000493232 ADAM28Q9UKQ2 775 aa16.56■□□□□ 0.24
BRAT1-206ENST00000493232 NFICP08651 508 aa16.56■□□□□ 0.24
BRAT1-206ENST00000493232 TSHRP16473 764 aa16.56■□□□□ 0.24
BRAT1-206ENST00000493232 NEK3P51956 506 aa16.56■□□□□ 0.24
BRAT1-206ENST00000493232 C16orf59Q7L2K0 433 aa16.56■□□□□ 0.24
BRAT1-206ENST00000493232 EPS8L1Q8TE68 723 aa16.56■□□□□ 0.24
BRAT1-206ENST00000493232 SH3GL2Q99962 352 aa16.56■□□□□ 0.24
BRAT1-206ENST00000493232 FTHL17Q9BXU8 183 aa16.56■□□□□ 0.24
BRAT1-206ENST00000493232 TRUB2O95900 331 aaKnown RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms