RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 ATP13A1Q9HD20 1204 aa14.33□□□□□ -0.12
CCM2-217ENST00000492883 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.33□□□□□ -0.12
CCM2-217ENST00000492883 NDFIP2Q9NV92 336 aa14.33□□□□□ -0.12
CCM2-217ENST00000492883 ZNF212Q9UDV6 495 aa14.33□□□□□ -0.12
CCM2-217ENST00000492883 EBF1Q9UH73 591 aa14.33□□□□□ -0.12
CCM2-217ENST00000492883 SLCO3A1Q9UIG8 710 aa14.33□□□□□ -0.12
CCM2-217ENST00000492883 SLC25A13Q9UJS0 675 aa14.33□□□□□ -0.12
CCM2-217ENST00000492883 TFR2Q9UP52 801 aa14.33□□□□□ -0.12
CCM2-217ENST00000492883 F5P12259 2224 aa14.33□□□□□ -0.12
CCM2-217ENST00000492883 H3BRJ5 948 aa14.32□□□□□ -0.12
CCM2-217ENST00000492883 CBX4O00257 560 aa14.32□□□□□ -0.12
CCM2-217ENST00000492883 FGF10O15520 208 aaPredicted RBP14.32□□□□□ -0.12
CCM2-217ENST00000492883 RAMP2O60895 175 aa14.32□□□□□ -0.12
CCM2-217ENST00000492883 GOT1P17174 413 aa14.32□□□□□ -0.12
CCM2-217ENST00000492883 MAN1A1P33908 653 aa14.32□□□□□ -0.12
CCM2-217ENST00000492883 ETFBP38117 255 aa14.32□□□□□ -0.12
CCM2-217ENST00000492883 ARL4AP40617 200 aa14.32□□□□□ -0.12
CCM2-217ENST00000492883 STK19P49842 368 aaPredicted RBP14.32□□□□□ -0.12
CCM2-217ENST00000492883 MRE11P49959 708 aa14.32□□□□□ -0.12
CCM2-217ENST00000492883 NAP1L1P55209 391 aaKnown RBP14.32□□□□□ -0.12
CCM2-217ENST00000492883 SLC25A11Q02978 314 aaKnown RBP14.32□□□□□ -0.12
CCM2-217ENST00000492883 KRT81Q14533 505 aa14.32□□□□□ -0.12
CCM2-217ENST00000492883 POLD3Q15054 466 aaPredicted RBP14.32□□□□□ -0.12
CCM2-217ENST00000492883 ACCSLQ4AC99 568 aa14.32□□□□□ -0.12
CCM2-217ENST00000492883 RFX8Q6ZV50 586 aa14.32□□□□□ -0.12
CCM2-217ENST00000492883 ZNF354CQ86Y25 554 aa14.32□□□□□ -0.12
CCM2-217ENST00000492883 CPNE8Q86YQ8 564 aa14.32□□□□□ -0.12
CCM2-217ENST00000492883 DCAF4L2Q8NA75 395 aa14.32□□□□□ -0.12
CCM2-217ENST00000492883 KDM1BQ8NB78 822 aa14.32□□□□□ -0.12
CCM2-217ENST00000492883 ZBTB44Q8NCP5 570 aa14.32□□□□□ -0.12
CCM2-217ENST00000492883 ACRBPQ8NEB7 543 aa14.32□□□□□ -0.12
CCM2-217ENST00000492883 MDGA1Q8NFP4 955 aa14.32□□□□□ -0.12
CCM2-217ENST00000492883 MAGEH1Q9H213 219 aa14.32□□□□□ -0.12
CCM2-217ENST00000492883 CWC15Q9P013 229 aaKnown RBP14.32□□□□□ -0.12
CCM2-217ENST00000492883 HPCAL4Q9UM19 191 aa14.32□□□□□ -0.12
CCM2-217ENST00000492883 NEU3Q9UQ49 428 aa14.32□□□□□ -0.12
CCM2-217ENST00000492883 CUL9Q8IWT3 2517 aa14.32□□□□□ -0.12
CCM2-217ENST00000492883 WASH4PA8MWX3 477 aa14.31□□□□□ -0.12
CCM2-217ENST00000492883 TTC34A8MYJ7 566 aa14.31□□□□□ -0.12
CCM2-217ENST00000492883 SNAP91O60641 907 aa14.31□□□□□ -0.12
CCM2-217ENST00000492883 KRT7P08729 469 aa14.31□□□□□ -0.12
CCM2-217ENST00000492883 GABRG2P18507 467 aa14.31□□□□□ -0.12
CCM2-217ENST00000492883 CNR2P34972 360 aa14.31□□□□□ -0.12
CCM2-217ENST00000492883 ACVRL1P37023 503 aa14.31□□□□□ -0.12
CCM2-217ENST00000492883 SLC1A1P43005 524 aa14.31□□□□□ -0.12
CCM2-217ENST00000492883 HCAR3P49019 387 aa14.31□□□□□ -0.12
CCM2-217ENST00000492883 VAV2P52735 878 aa14.31□□□□□ -0.12
CCM2-217ENST00000492883 CDH6P55285 790 aa14.31□□□□□ -0.12
CCM2-217ENST00000492883 TAS2R40P59535 323 aa14.31□□□□□ -0.12
CCM2-217ENST00000492883 NHLH1Q02575 133 aa14.31□□□□□ -0.12
CCM2-217ENST00000492883 DPYSL2Q16555 572 aa14.31□□□□□ -0.12
CCM2-217ENST00000492883 USP39Q53GS9 565 aaKnown RBP14.31□□□□□ -0.12
CCM2-217ENST00000492883 RETSATQ6NUM9 610 aa14.31□□□□□ -0.12
CCM2-217ENST00000492883 RASSF3Q86WH2 238 aa14.31□□□□□ -0.12
CCM2-217ENST00000492883 TMPRSS6Q8IU80 811 aa14.31□□□□□ -0.12
CCM2-217ENST00000492883 TXLNBQ8N3L3 684 aa14.31□□□□□ -0.12
CCM2-217ENST00000492883 ATP11CQ8NB49 1132 aa14.31□□□□□ -0.12
CCM2-217ENST00000492883 KCTD6Q8NC69 237 aa14.31□□□□□ -0.12
CCM2-217ENST00000492883 ARHGEF2Q92974 986 aaKnown RBP14.31□□□□□ -0.12
CCM2-217ENST00000492883 MYO19Q96H55 970 aa14.31□□□□□ -0.12
CCM2-217ENST00000492883 PSMB7Q99436 277 aa14.31□□□□□ -0.12
CCM2-217ENST00000492883 TPSD1Q9BZJ3 242 aa14.31□□□□□ -0.12
CCM2-217ENST00000492883 MTG2Q9H4K7 406 aa14.31□□□□□ -0.12
CCM2-217ENST00000492883 VPS51Q9UID3 782 aa14.31□□□□□ -0.12
CCM2-217ENST00000492883 REXO2Q9Y3B8 237 aaKnown RBP14.31□□□□□ -0.12
CCM2-217ENST00000492883 KMT2EQ8IZD2 1858 aa14.3□□□□□ -0.12
CCM2-217ENST00000492883 A0A0A6YYK5 440 aaPredicted RBP14.3□□□□□ -0.12
CCM2-217ENST00000492883 RCCD1A6NED2 376 aa14.3□□□□□ -0.12
CCM2-217ENST00000492883 HRO43593 1189 aa14.3□□□□□ -0.12
CCM2-217ENST00000492883 NRDCO43847 1150 aa14.3□□□□□ -0.12
CCM2-217ENST00000492883 TNNT1P13805 278 aa14.3□□□□□ -0.12
CCM2-217ENST00000492883 ERCC2P18074 760 aa14.3□□□□□ -0.12
CCM2-217ENST00000492883 NDUFV2P19404 249 aa14.3□□□□□ -0.12
CCM2-217ENST00000492883 GLDCP23378 1020 aa14.3□□□□□ -0.12
CCM2-217ENST00000492883 HADHBP55084 474 aaKnown RBP14.3□□□□□ -0.12
CCM2-217ENST00000492883 YBEYP58557 167 aaPredicted RBP14.3□□□□□ -0.12
CCM2-217ENST00000492883 SLC20A2Q08357 652 aa14.3□□□□□ -0.12
CCM2-217ENST00000492883 CAMK2GQ13555 558 aaPredicted RBP14.3□□□□□ -0.12
CCM2-217ENST00000492883 HNRNPA1L2Q32P51 320 aaKnown RBP14.3□□□□□ -0.12
CCM2-217ENST00000492883 ATP13A4Q4VNC1 1196 aa14.3□□□□□ -0.12
CCM2-217ENST00000492883 KIAA1324Q6UXG2 1013 aaKnown RBP14.3□□□□□ -0.12
CCM2-217ENST00000492883 LINGO4Q6UY18 593 aa14.3□□□□□ -0.12
CCM2-217ENST00000492883 CEP68Q76N32 757 aa14.3□□□□□ -0.12
CCM2-217ENST00000492883 POLNQ7Z5Q5 900 aa14.3□□□□□ -0.12
CCM2-217ENST00000492883 MAP7D3Q8IWC1 876 aa14.3□□□□□ -0.12
CCM2-217ENST00000492883 CCDC112Q8NEF3 446 aa14.3□□□□□ -0.12
CCM2-217ENST00000492883 OR2T3Q8NH03 318 aa14.3□□□□□ -0.12
CCM2-217ENST00000492883 PRCCQ92733 491 aaPredicted RBP14.3□□□□□ -0.12
CCM2-217ENST00000492883 MRGPRX1Q96LB2 322 aa14.3□□□□□ -0.12
CCM2-217ENST00000492883 DESI2Q9BSY9 194 aa14.3□□□□□ -0.12
CCM2-217ENST00000492883 SLC6A17Q9H1V8 727 aa14.3□□□□□ -0.12
CCM2-217ENST00000492883 PRDM16Q9HAZ2 1276 aa14.3□□□□□ -0.12
CCM2-217ENST00000492883 PCDH18Q9HCL0 1135 aa14.3□□□□□ -0.12
CCM2-217ENST00000492883 CD248Q9HCU0 757 aa14.3□□□□□ -0.12
CCM2-217ENST00000492883 PRSS16Q9NQE7 514 aa14.3□□□□□ -0.12
CCM2-217ENST00000492883 INVSQ9Y283 1065 aa14.3□□□□□ -0.12
CCM2-217ENST00000492883 MYOFQ9NZM1 2061 aa14.29□□□□□ -0.12
CCM2-217ENST00000492883 EDDM13A0A1B0GTR0 161 aa14.29□□□□□ -0.12
CCM2-217ENST00000492883 TARSL2A2RTX5 802 aaKnown RBP14.29□□□□□ -0.12
CCM2-217ENST00000492883 RASA4BC9J798 803 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms