RNA–Protein interactions for RNA: ENST00000491319.2

SMPD4-220, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-220ENST00000491319 PAGE1O75459 146 aa16.17■□□□□ 0.18
SMPD4-220ENST00000491319 DKK1O94907 266 aa16.17■□□□□ 0.18
SMPD4-220ENST00000491319 CAPNS1P04632 268 aa16.17■□□□□ 0.18
SMPD4-220ENST00000491319 PRKCSHP14314 528 aaPredicted RBP16.17■□□□□ 0.18
SMPD4-220ENST00000491319 GOT1P17174 413 aa16.17■□□□□ 0.18
SMPD4-220ENST00000491319 TFE3P19532 575 aaPredicted RBP16.17■□□□□ 0.18
SMPD4-220ENST00000491319 GRK6P43250 576 aa16.17■□□□□ 0.18
SMPD4-220ENST00000491319 PLK1P53350 603 aa16.17■□□□□ 0.18
SMPD4-220ENST00000491319 SCAPQ12770 1279 aa16.17■□□□□ 0.18
SMPD4-220ENST00000491319 DPY19L2P1Q6NXN4 242 aa16.17■□□□□ 0.18
SMPD4-220ENST00000491319 CCNI2Q6ZMN8 369 aaPredicted RBP16.17■□□□□ 0.18
SMPD4-220ENST00000491319 C14orf80Q86SX3 495 aa16.17■□□□□ 0.18
SMPD4-220ENST00000491319 ZNF397Q8NF99 534 aaPredicted RBP16.17■□□□□ 0.18
SMPD4-220ENST00000491319 SPAG5Q96R06 1193 aa16.17■□□□□ 0.18
SMPD4-220ENST00000491319 NDST4Q9H3R1 872 aa16.17■□□□□ 0.18
SMPD4-220ENST00000491319 CLSTN2Q9H4D0 955 aa16.17■□□□□ 0.18
SMPD4-220ENST00000491319 AASDHPPTQ9NRN7 309 aa16.17■□□□□ 0.18
SMPD4-220ENST00000491319 PIGVQ9NUD9 493 aa16.17■□□□□ 0.18
SMPD4-220ENST00000491319 SLC25A13Q9UJS0 675 aa16.17■□□□□ 0.18
SMPD4-220ENST00000491319 FHOD1Q9Y613 1164 aa16.17■□□□□ 0.18
SMPD4-220ENST00000491319 TRPM6Q9BX84 2022 aa16.16■□□□□ 0.18
SMPD4-220ENST00000491319 NOS2P35228 1153 aa16.16■□□□□ 0.18
SMPD4-220ENST00000491319 CCR5P51681 352 aa16.16■□□□□ 0.18
SMPD4-220ENST00000491319 OXCT1P55809 520 aa16.16■□□□□ 0.18
SMPD4-220ENST00000491319 RAPGEF1Q13905 1077 aa16.16■□□□□ 0.18
SMPD4-220ENST00000491319 VWA3BQ502W6 1294 aa16.16■□□□□ 0.18
SMPD4-220ENST00000491319 PRAMEF14Q5SWL7 426 aa16.16■□□□□ 0.18
SMPD4-220ENST00000491319 PROSER1Q86XN7 944 aa16.16■□□□□ 0.18
SMPD4-220ENST00000491319 FAM114A1Q8IWE2 563 aa16.16■□□□□ 0.18
SMPD4-220ENST00000491319 FAM71AQ8IYT1 594 aa16.16■□□□□ 0.18
SMPD4-220ENST00000491319 NPY6RQ99463 290 aa16.16■□□□□ 0.18
SMPD4-220ENST00000491319 FEM1AQ9BSK4 669 aa16.16■□□□□ 0.18
SMPD4-220ENST00000491319 SIK2Q9H0K1 926 aa16.16■□□□□ 0.18
SMPD4-220ENST00000491319 ANLNQ9NQW6 1124 aa16.16■□□□□ 0.18
SMPD4-220ENST00000491319 VPS28Q9UK41 221 aa16.16■□□□□ 0.18
SMPD4-220ENST00000491319 SARDHQ9UL12 918 aa16.16■□□□□ 0.18
SMPD4-220ENST00000491319 KNTC1P50748 2209 aa16.15■□□□□ 0.18
SMPD4-220ENST00000491319 CACNA1GO43497 2377 aa16.15■□□□□ 0.18
SMPD4-220ENST00000491319 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.15■□□□□ 0.18
SMPD4-220ENST00000491319 A0A1B0GTQ1 180 aa16.15■□□□□ 0.18
SMPD4-220ENST00000491319 A0A1W2PR77 199 aa16.15■□□□□ 0.18
SMPD4-220ENST00000491319 I6L893 689 aaPredicted RBP16.15■□□□□ 0.18
SMPD4-220ENST00000491319 ATP9BO43861 1147 aa16.15■□□□□ 0.18
SMPD4-220ENST00000491319 RTN2O75298 545 aa16.15■□□□□ 0.18
SMPD4-220ENST00000491319 CNTN5O94779 1100 aa16.15■□□□□ 0.18
SMPD4-220ENST00000491319 ADCY5O95622 1261 aa16.15■□□□□ 0.18
SMPD4-220ENST00000491319 CD38P28907 300 aa16.15■□□□□ 0.18
SMPD4-220ENST00000491319 SULT1E1P49888 294 aa16.15■□□□□ 0.18
SMPD4-220ENST00000491319 SNX16P57768 344 aa16.15■□□□□ 0.18
SMPD4-220ENST00000491319 RNASE9P60153 205 aaKnown RBP16.15■□□□□ 0.18
SMPD4-220ENST00000491319 KCNMA1Q12791 1236 aa16.15■□□□□ 0.18
SMPD4-220ENST00000491319 ZNF177Q13360 481 aaPredicted RBP16.15■□□□□ 0.18
SMPD4-220ENST00000491319 DRAP1Q14919 205 aaPredicted RBP16.15■□□□□ 0.18
SMPD4-220ENST00000491319 POM121L1PQ3SYA9 428 aa16.15■□□□□ 0.18
SMPD4-220ENST00000491319 ACCSLQ4AC99 568 aa16.15■□□□□ 0.18
SMPD4-220ENST00000491319 LRSAM1Q6UWE0 723 aa16.15■□□□□ 0.18
SMPD4-220ENST00000491319 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.15■□□□□ 0.18
SMPD4-220ENST00000491319 Q6ZVU0 165 aa16.15■□□□□ 0.18
SMPD4-220ENST00000491319 MARCH9Q86YJ5 346 aa16.15■□□□□ 0.18
SMPD4-220ENST00000491319 GATAD2AQ86YP4 633 aa16.15■□□□□ 0.18
SMPD4-220ENST00000491319 OR8D1Q8WZ84 308 aa16.15■□□□□ 0.18
SMPD4-220ENST00000491319 FAM131CQ96AQ9 280 aa16.15■□□□□ 0.18
SMPD4-220ENST00000491319 SERAC1Q96JX3 654 aa16.15■□□□□ 0.18
SMPD4-220ENST00000491319 TUBGCP2Q9BSJ2 902 aa16.15■□□□□ 0.18
SMPD4-220ENST00000491319 TKTL2Q9H0I9 626 aa16.15■□□□□ 0.18
SMPD4-220ENST00000491319 OR51B4Q9Y5P0 310 aa16.15■□□□□ 0.18
SMPD4-220ENST00000491319 SNX10Q9Y5X0 201 aa16.15■□□□□ 0.18
SMPD4-220ENST00000491319 TBC1D3DA0A087WVF3 549 aa16.14■□□□□ 0.17
SMPD4-220ENST00000491319 TBC1D3IA0A087WXS9 549 aa16.14■□□□□ 0.17
SMPD4-220ENST00000491319 TBC1D3EA0A087X179 549 aa16.14■□□□□ 0.17
SMPD4-220ENST00000491319 TBC1D3KA0A087X1G2 549 aa16.14■□□□□ 0.17
SMPD4-220ENST00000491319 TBC1D3FA6NER0 549 aaPredicted RBP16.14■□□□□ 0.17
SMPD4-220ENST00000491319 TBC1D3LB9A6J9 549 aa16.14■□□□□ 0.17
SMPD4-220ENST00000491319 PES1O00541 588 aaKnown RBP16.14■□□□□ 0.17
SMPD4-220ENST00000491319 TNFSF14O43557 240 aa16.14■□□□□ 0.17
SMPD4-220ENST00000491319 LATO43561 262 aa16.14■□□□□ 0.17
SMPD4-220ENST00000491319 CLDN11O75508 207 aa16.14■□□□□ 0.17
SMPD4-220ENST00000491319 TBC1D3HP0C7X1 549 aa16.14■□□□□ 0.17
SMPD4-220ENST00000491319 CYP11B1P15538 503 aa16.14■□□□□ 0.17
SMPD4-220ENST00000491319 CDH5P33151 784 aaPredicted RBP16.14■□□□□ 0.17
SMPD4-220ENST00000491319 VASPP50552 380 aaPredicted RBP16.14■□□□□ 0.17
SMPD4-220ENST00000491319 CDH4P55283 916 aa16.14■□□□□ 0.17
SMPD4-220ENST00000491319 MTA1Q13330 715 aa16.14■□□□□ 0.17
SMPD4-220ENST00000491319 SHBQ15464 509 aa16.14■□□□□ 0.17
SMPD4-220ENST00000491319 DLG2Q15700 870 aa16.14■□□□□ 0.17
SMPD4-220ENST00000491319 C5orf22Q49AR2 442 aa16.14■□□□□ 0.17
SMPD4-220ENST00000491319 ALFQ53S48 1182 aa16.14■□□□□ 0.17
SMPD4-220ENST00000491319 CCDC157Q569K6 752 aa16.14■□□□□ 0.17
SMPD4-220ENST00000491319 TAF3Q5VWG9 929 aa16.14■□□□□ 0.17
SMPD4-220ENST00000491319 TBC1D3GQ6DHY5 549 aa16.14■□□□□ 0.17
SMPD4-220ENST00000491319 SMYD5Q6GMV2 418 aa16.14■□□□□ 0.17
SMPD4-220ENST00000491319 TBC1D3CQ6IPX1 549 aa16.14■□□□□ 0.17
SMPD4-220ENST00000491319 TMPRSS7Q7RTY8 843 aa16.14■□□□□ 0.17
SMPD4-220ENST00000491319 DSG4Q86SJ6 1040 aa16.14■□□□□ 0.17
SMPD4-220ENST00000491319 ZDHHC17Q8IUH5 632 aa16.14■□□□□ 0.17
SMPD4-220ENST00000491319 TBC1D3Q8IZP1 549 aaPredicted RBP16.14■□□□□ 0.17
SMPD4-220ENST00000491319 SH2D3CQ8N5H7 860 aa16.14■□□□□ 0.17
SMPD4-220ENST00000491319 TMEM35BQ8NCS4 154 aa16.14■□□□□ 0.17
SMPD4-220ENST00000491319 MDM1Q8TC05 714 aa16.14■□□□□ 0.17
SMPD4-220ENST00000491319 TBCBQ99426 244 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms