RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 PCDHGA1Q9Y5H4 931 aa16.03■□□□□ 0.16
COL2A1-207ENST00000490609 ASH1LQ9NR48 2969 aaKnown RBP16.02■□□□□ 0.16
COL2A1-207ENST00000490609 BIN1O00499 593 aa16.02■□□□□ 0.16
COL2A1-207ENST00000490609 SART1O43290 800 aaKnown RBP16.02■□□□□ 0.16
COL2A1-207ENST00000490609 TLX3O43711 291 aaPredicted RBP16.02■□□□□ 0.16
COL2A1-207ENST00000490609 ATP9BO43861 1147 aa16.02■□□□□ 0.16
COL2A1-207ENST00000490609 GADD45BO75293 160 aaPredicted RBP16.02■□□□□ 0.16
COL2A1-207ENST00000490609 LDOC1O95751 146 aaPredicted RBP16.02■□□□□ 0.16
COL2A1-207ENST00000490609 ADH1BP00325 375 aa16.02■□□□□ 0.16
COL2A1-207ENST00000490609 IL1BP01584 269 aa16.02■□□□□ 0.16
COL2A1-207ENST00000490609 AFPP02771 609 aaKnown RBP16.02■□□□□ 0.16
COL2A1-207ENST00000490609 KRT5P13647 590 aa16.02■□□□□ 0.16
COL2A1-207ENST00000490609 SLC12A1Q13621 1099 aa16.02■□□□□ 0.16
COL2A1-207ENST00000490609 ELAVL3Q14576 367 aaKnown RBP16.02■□□□□ 0.16
COL2A1-207ENST00000490609 C5orf22Q49AR2 442 aa16.02■□□□□ 0.16
COL2A1-207ENST00000490609 AGBL4Q5VU57 503 aa16.02■□□□□ 0.16
COL2A1-207ENST00000490609 FBXL19Q6PCT2 694 aa16.02■□□□□ 0.16
COL2A1-207ENST00000490609 CNDP2Q96KP4 475 aaKnown RBP16.02■□□□□ 0.16
COL2A1-207ENST00000490609 FEM1AQ9BSK4 669 aa16.02■□□□□ 0.16
COL2A1-207ENST00000490609 CRACR2AQ9BSW2 395 aa16.02■□□□□ 0.16
COL2A1-207ENST00000490609 ERVMER34-1Q9H9K5 563 aa16.02■□□□□ 0.16
COL2A1-207ENST00000490609 AASDHPPTQ9NRN7 309 aa16.02■□□□□ 0.16
COL2A1-207ENST00000490609 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.02■□□□□ 0.16
COL2A1-207ENST00000490609 CA5BQ9Y2D0 317 aa16.02■□□□□ 0.16
COL2A1-207ENST00000490609 RP1P56715 2156 aa16.02■□□□□ 0.15
COL2A1-207ENST00000490609 KIF26BQ2KJY2 2108 aa16.01■□□□□ 0.15
COL2A1-207ENST00000490609 TBC1D3DA0A087WVF3 549 aa16.01■□□□□ 0.15
COL2A1-207ENST00000490609 TBC1D3IA0A087WXS9 549 aa16.01■□□□□ 0.15
COL2A1-207ENST00000490609 TBC1D3EA0A087X179 549 aa16.01■□□□□ 0.15
COL2A1-207ENST00000490609 TBC1D3KA0A087X1G2 549 aa16.01■□□□□ 0.15
COL2A1-207ENST00000490609 TYW5A2RUC4 315 aaKnown RBP16.01■□□□□ 0.15
COL2A1-207ENST00000490609 TBC1D3FA6NER0 549 aaPredicted RBP16.01■□□□□ 0.15
COL2A1-207ENST00000490609 TBC1D3LB9A6J9 549 aa16.01■□□□□ 0.15
COL2A1-207ENST00000490609 CAPN9O14815 690 aa16.01■□□□□ 0.15
COL2A1-207ENST00000490609 PLRG1O43660 514 aaKnown RBP16.01■□□□□ 0.15
COL2A1-207ENST00000490609 MT-CO1P00395 513 aa16.01■□□□□ 0.15
COL2A1-207ENST00000490609 APOEP02649 317 aa16.01■□□□□ 0.15
COL2A1-207ENST00000490609 CTSLP07711 333 aa16.01■□□□□ 0.15
COL2A1-207ENST00000490609 TBC1D3HP0C7X1 549 aa16.01■□□□□ 0.15
COL2A1-207ENST00000490609 TFE3P19532 575 aaPredicted RBP16.01■□□□□ 0.15
COL2A1-207ENST00000490609 GNA15P30679 374 aa16.01■□□□□ 0.15
COL2A1-207ENST00000490609 GGCXP38435 758 aa16.01■□□□□ 0.15
COL2A1-207ENST00000490609 CNTN1Q12860 1018 aa16.01■□□□□ 0.15
COL2A1-207ENST00000490609 STIM1Q13586 685 aa16.01■□□□□ 0.15
COL2A1-207ENST00000490609 AUHQ13825 339 aaKnown RBP16.01■□□□□ 0.15
COL2A1-207ENST00000490609 TBC1D3GQ6DHY5 549 aa16.01■□□□□ 0.15
COL2A1-207ENST00000490609 TBC1D3CQ6IPX1 549 aa16.01■□□□□ 0.15
COL2A1-207ENST00000490609 TRIM65Q6PJ69 517 aa16.01■□□□□ 0.15
COL2A1-207ENST00000490609 ZNF683Q8IZ20 524 aa16.01■□□□□ 0.15
COL2A1-207ENST00000490609 TBC1D3Q8IZP1 549 aaPredicted RBP16.01■□□□□ 0.15
COL2A1-207ENST00000490609 MFSD2AQ8NA29 543 aa16.01■□□□□ 0.15
COL2A1-207ENST00000490609 PSMB7Q99436 277 aa16.01■□□□□ 0.15
COL2A1-207ENST00000490609 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.01■□□□□ 0.15
COL2A1-207ENST00000490609 HS3ST4Q9Y661 456 aa16.01■□□□□ 0.15
COL2A1-207ENST00000490609 A0A1B0GVM2 712 aa16■□□□□ 0.15
COL2A1-207ENST00000490609 TCAF2A6NFQ2 919 aa16■□□□□ 0.15
COL2A1-207ENST00000490609 F5H5T6 163 aa16■□□□□ 0.15
COL2A1-207ENST00000490609 THAP12O43422 761 aa16■□□□□ 0.15
COL2A1-207ENST00000490609 GRAP2O75791 330 aa16■□□□□ 0.15
COL2A1-207ENST00000490609 CNTN5O94779 1100 aa16■□□□□ 0.15
COL2A1-207ENST00000490609 MOCS3O95396 460 aa16■□□□□ 0.15
COL2A1-207ENST00000490609 ITGAVP06756 1048 aa16■□□□□ 0.15
COL2A1-207ENST00000490609 GIMD1P0DJR0 217 aa16■□□□□ 0.15
COL2A1-207ENST00000490609 ITPKBP27987 946 aa16■□□□□ 0.15
COL2A1-207ENST00000490609 MAT2AP31153 395 aaKnown RBP16■□□□□ 0.15
COL2A1-207ENST00000490609 CETN1Q12798 172 aa16■□□□□ 0.15
COL2A1-207ENST00000490609 TARDBPQ13148 414 aaKnown RBP eCLIP16■□□□□ 0.15
COL2A1-207ENST00000490609 POM121L1PQ3SYA9 428 aa16■□□□□ 0.15
COL2A1-207ENST00000490609 NAPEPLDQ6IQ20 393 aa16■□□□□ 0.15
COL2A1-207ENST00000490609 OLFML1Q6UWY5 402 aa16■□□□□ 0.15
COL2A1-207ENST00000490609 FAM183BPQ6ZVS7 135 aa16■□□□□ 0.15
COL2A1-207ENST00000490609 SLC25A45Q8N413 288 aa16■□□□□ 0.15
COL2A1-207ENST00000490609 ATP6V0D2Q8N8Y2 350 aa16■□□□□ 0.15
COL2A1-207ENST00000490609 SPAG5Q96R06 1193 aa16■□□□□ 0.15
COL2A1-207ENST00000490609 SIX2Q9NPC8 291 aa16■□□□□ 0.15
COL2A1-207ENST00000490609 GDF3Q9NR23 364 aa16■□□□□ 0.15
COL2A1-207ENST00000490609 TBC1D30Q9Y2I9 924 aa16■□□□□ 0.15
COL2A1-207ENST00000490609 SYNJ2BP-COX16A0A087WUM0 186 aa15.99■□□□□ 0.15
COL2A1-207ENST00000490609 GOLGA6L4A6NEF3 574 aa15.99■□□□□ 0.15
COL2A1-207ENST00000490609 E9PAM4 449 aa15.99■□□□□ 0.15
COL2A1-207ENST00000490609 TRIM38O00635 465 aa15.99■□□□□ 0.15
COL2A1-207ENST00000490609 MCF2LO15068 1137 aa15.99■□□□□ 0.15
COL2A1-207ENST00000490609 RFPL3O75679 317 aa15.99■□□□□ 0.15
COL2A1-207ENST00000490609 ERBB2P04626 1255 aa15.99■□□□□ 0.15
COL2A1-207ENST00000490609 C1SP09871 688 aa15.99■□□□□ 0.15
COL2A1-207ENST00000490609 ABCB4P21439 1286 aa15.99■□□□□ 0.15
COL2A1-207ENST00000490609 PPP1R2P41236 205 aa15.99■□□□□ 0.15
COL2A1-207ENST00000490609 SFSWAPQ12872 951 aaKnown RBP15.99■□□□□ 0.15
COL2A1-207ENST00000490609 DLG2Q15700 870 aa15.99■□□□□ 0.15
COL2A1-207ENST00000490609 PROX2Q3B8N5 592 aa15.99■□□□□ 0.15
COL2A1-207ENST00000490609 ALFQ53S48 1182 aa15.99■□□□□ 0.15
COL2A1-207ENST00000490609 PIP5KL1Q5T9C9 394 aa15.99■□□□□ 0.15
COL2A1-207ENST00000490609 TRIM69Q86WT6 500 aa15.99■□□□□ 0.15
COL2A1-207ENST00000490609 PASD1Q8IV76 773 aa15.99■□□□□ 0.15
COL2A1-207ENST00000490609 SH2D3CQ8N5H7 860 aa15.99■□□□□ 0.15
COL2A1-207ENST00000490609 SHC3Q92529 594 aa15.99■□□□□ 0.15
COL2A1-207ENST00000490609 KDM4CQ9H3R0 1056 aa15.99■□□□□ 0.15
COL2A1-207ENST00000490609 ASNSD1Q9NWL6 643 aa15.99■□□□□ 0.15
COL2A1-207ENST00000490609 DDIT4Q9NX09 232 aa15.99■□□□□ 0.15
COL2A1-207ENST00000490609 COX16Q9P0S2 106 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms