RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 ITGAVP06756 1048 aa13.56□□□□□ -0.24
SNX12-205ENST00000490561 RBP3P10745 1247 aa13.56□□□□□ -0.24
SNX12-205ENST00000490561 CCNCP24863 283 aa13.56□□□□□ -0.24
SNX12-205ENST00000490561 STIP1P31948 543 aaKnown RBP13.56□□□□□ -0.24
SNX12-205ENST00000490561 COILP38432 576 aaPredicted RBP13.56□□□□□ -0.24
SNX12-205ENST00000490561 PLK1P53350 603 aa13.56□□□□□ -0.24
SNX12-205ENST00000490561 TFF2Q03403 129 aa13.56□□□□□ -0.24
SNX12-205ENST00000490561 SULT2A1Q06520 285 aa13.56□□□□□ -0.24
SNX12-205ENST00000490561 PPIDQ08752 370 aaKnown RBP13.56□□□□□ -0.24
SNX12-205ENST00000490561 SERINC3Q13530 473 aa13.56□□□□□ -0.24
SNX12-205ENST00000490561 RNF219Q5W0B1 726 aaPredicted RBP13.56□□□□□ -0.24
SNX12-205ENST00000490561 GRAMD4Q6IC98 578 aa13.56□□□□□ -0.24
SNX12-205ENST00000490561 CCDC70Q6NSX1 233 aa13.56□□□□□ -0.24
SNX12-205ENST00000490561 DARS2Q6PI48 645 aaKnown RBP13.56□□□□□ -0.24
SNX12-205ENST00000490561 METTL3Q86U44 580 aaKnown RBP13.56□□□□□ -0.24
SNX12-205ENST00000490561 ZNF354CQ86Y25 554 aa13.56□□□□□ -0.24
SNX12-205ENST00000490561 SLC44A3Q8N4M1 653 aa13.56□□□□□ -0.24
SNX12-205ENST00000490561 DCAF4L2Q8NA75 395 aa13.56□□□□□ -0.24
SNX12-205ENST00000490561 CCNYQ8ND76 341 aa13.56□□□□□ -0.24
SNX12-205ENST00000490561 ATL2Q8NHH9 583 aa13.56□□□□□ -0.24
SNX12-205ENST00000490561 CCDC26Q8TAB7 109 aa13.56□□□□□ -0.24
SNX12-205ENST00000490561 C1orf54Q8WWF1 131 aa13.56□□□□□ -0.24
SNX12-205ENST00000490561 ARHGEF2Q92974 986 aaKnown RBP13.56□□□□□ -0.24
SNX12-205ENST00000490561 BHMTQ93088 406 aa13.56□□□□□ -0.24
SNX12-205ENST00000490561 ACDQ96AP0 544 aa13.56□□□□□ -0.24
SNX12-205ENST00000490561 CELF6Q96J87 481 aaKnown RBP13.56□□□□□ -0.24
SNX12-205ENST00000490561 ZNF599Q96NL3 588 aa13.56□□□□□ -0.24
SNX12-205ENST00000490561 C2orf49Q9BVC5 232 aaPredicted RBP13.56□□□□□ -0.24
SNX12-205ENST00000490561 NOL6Q9H6R4 1146 aaKnown RBP13.56□□□□□ -0.24
SNX12-205ENST00000490561 C8orf33Q9H7E9 229 aaPredicted RBP13.56□□□□□ -0.24
SNX12-205ENST00000490561 SP110Q9HB58 689 aa13.56□□□□□ -0.24
SNX12-205ENST00000490561 NDFIP2Q9NV92 336 aa13.56□□□□□ -0.24
SNX12-205ENST00000490561 DNAJC17Q9NVM6 304 aaKnown RBP13.56□□□□□ -0.24
SNX12-205ENST00000490561 PLK2Q9NYY3 685 aa13.56□□□□□ -0.24
SNX12-205ENST00000490561 DEC1Q9P2X7 70 aa13.56□□□□□ -0.24
SNX12-205ENST00000490561 R3HDM2Q9Y2K5 976 aaKnown RBP13.56□□□□□ -0.24
SNX12-205ENST00000490561 SLC27A6Q9Y2P4 619 aa13.56□□□□□ -0.24
SNX12-205ENST00000490561 MFHAS1Q9Y4C4 1052 aa13.56□□□□□ -0.24
SNX12-205ENST00000490561 DOCK4Q8N1I0 1966 aa13.55□□□□□ -0.24
SNX12-205ENST00000490561 KDELR3O43731 214 aa13.55□□□□□ -0.24
SNX12-205ENST00000490561 GAS8O95995 478 aa13.55□□□□□ -0.24
SNX12-205ENST00000490561 GLULP15104 373 aa13.55□□□□□ -0.24
SNX12-205ENST00000490561 GJA4P35212 333 aa13.55□□□□□ -0.24
SNX12-205ENST00000490561 CSKP41240 450 aa13.55□□□□□ -0.24
SNX12-205ENST00000490561 DGKGP49619 791 aa13.55□□□□□ -0.24
SNX12-205ENST00000490561 PAPOLAP51003 745 aaKnown RBP13.55□□□□□ -0.24
SNX12-205ENST00000490561 ZP2Q05996 745 aa13.55□□□□□ -0.24
SNX12-205ENST00000490561 IL10RBQ08334 325 aa13.55□□□□□ -0.24
SNX12-205ENST00000490561 LMAN2Q12907 356 aa13.55□□□□□ -0.24
SNX12-205ENST00000490561 SLC10A2Q12908 348 aaPredicted RBP13.55□□□□□ -0.24
SNX12-205ENST00000490561 TDGQ13569 410 aa13.55□□□□□ -0.24
SNX12-205ENST00000490561 DHX34Q14147 1143 aaKnown RBP13.55□□□□□ -0.24
SNX12-205ENST00000490561 RFTN1Q14699 578 aaPredicted RBP13.55□□□□□ -0.24
SNX12-205ENST00000490561 PRKD1Q15139 912 aaPredicted RBP13.55□□□□□ -0.24
SNX12-205ENST00000490561 OASLQ15646 514 aaKnown RBP13.55□□□□□ -0.24
SNX12-205ENST00000490561 HEATR6Q6AI08 1181 aaKnown RBP13.55□□□□□ -0.24
SNX12-205ENST00000490561 IL31Q6EBC2 164 aa13.55□□□□□ -0.24
SNX12-205ENST00000490561 CCDC137Q6PK04 289 aaKnown RBP13.55□□□□□ -0.24
SNX12-205ENST00000490561 SYDE1Q6ZW31 735 aaPredicted RBP13.55□□□□□ -0.24
SNX12-205ENST00000490561 MAATS1Q7Z4T9 603 aa13.55□□□□□ -0.24
SNX12-205ENST00000490561 ETFBKMTQ8IXQ9 262 aa13.55□□□□□ -0.24
SNX12-205ENST00000490561 CCDC13Q8IYE1 715 aa13.55□□□□□ -0.24
SNX12-205ENST00000490561 CCDC105Q8IYK2 499 aa13.55□□□□□ -0.24
SNX12-205ENST00000490561 AHI1Q8N157 1196 aa13.55□□□□□ -0.24
SNX12-205ENST00000490561 BBS5Q8N3I7 341 aa13.55□□□□□ -0.24
SNX12-205ENST00000490561 CASKIN2Q8WXE0 1202 aa13.55□□□□□ -0.24
SNX12-205ENST00000490561 RSAD2Q8WXG1 361 aa13.55□□□□□ -0.24
SNX12-205ENST00000490561 SLCO2A1Q92959 643 aa13.55□□□□□ -0.24
SNX12-205ENST00000490561 HMCESQ96FZ2 354 aa13.55□□□□□ -0.24
SNX12-205ENST00000490561 VAT1Q99536 393 aa13.55□□□□□ -0.24
SNX12-205ENST00000490561 FEM1AQ9BSK4 669 aa13.55□□□□□ -0.24
SNX12-205ENST00000490561 RPP25Q9BUL9 199 aaKnown RBP13.55□□□□□ -0.24
SNX12-205ENST00000490561 CARD6Q9BX69 1037 aa13.55□□□□□ -0.24
SNX12-205ENST00000490561 ACE2Q9BYF1 805 aaPredicted RBP13.55□□□□□ -0.24
SNX12-205ENST00000490561 ATP13A1Q9HD20 1204 aa13.55□□□□□ -0.24
SNX12-205ENST00000490561 RRAGDQ9NQL2 400 aaPredicted RBP13.55□□□□□ -0.24
SNX12-205ENST00000490561 PRDM6Q9NQX0 595 aa13.55□□□□□ -0.24
SNX12-205ENST00000490561 SLC2A4RGQ9NR83 387 aa13.55□□□□□ -0.24
SNX12-205ENST00000490561 RBM12Q9NTZ6 932 aaKnown RBP13.55□□□□□ -0.24
SNX12-205ENST00000490561 SAE1Q9UBE0 346 aaPredicted RBP13.55□□□□□ -0.24
SNX12-205ENST00000490561 PCYOX1Q9UHG3 505 aa13.55□□□□□ -0.24
SNX12-205ENST00000490561 IPO11Q9UI26 975 aaKnown RBP13.55□□□□□ -0.24
SNX12-205ENST00000490561 GGA2Q9UJY4 613 aa13.55□□□□□ -0.24
SNX12-205ENST00000490561 VPS28Q9UK41 221 aa13.55□□□□□ -0.24
SNX12-205ENST00000490561 DNPEPQ9ULA0 475 aa13.55□□□□□ -0.24
SNX12-205ENST00000490561 ZNF148Q9UQR1 794 aa13.55□□□□□ -0.24
SNX12-205ENST00000490561 BRWD1Q9NSI6 2320 aa13.55□□□□□ -0.24
SNX12-205ENST00000490561 TIMM44O43615 452 aa13.54□□□□□ -0.24
SNX12-205ENST00000490561 PRAMEF11O60813 436 aa13.54□□□□□ -0.24
SNX12-205ENST00000490561 SLU7O95391 586 aaKnown RBP13.54□□□□□ -0.24
SNX12-205ENST00000490561 ASLP04424 464 aa13.54□□□□□ -0.24
SNX12-205ENST00000490561 SRFP11831 508 aa13.54□□□□□ -0.24
SNX12-205ENST00000490561 PABPC1P11940 636 aaKnown RBP13.54□□□□□ -0.24
SNX12-205ENST00000490561 ACTN2P35609 894 aa13.54□□□□□ -0.24
SNX12-205ENST00000490561 TNK2Q07912 1038 aa13.54□□□□□ -0.24
SNX12-205ENST00000490561 SLC20A2Q08357 652 aa13.54□□□□□ -0.24
SNX12-205ENST00000490561 AP1B1Q10567 949 aa13.54□□□□□ -0.24
SNX12-205ENST00000490561 EIF4HQ15056 248 aaKnown RBP13.54□□□□□ -0.24
SNX12-205ENST00000490561 PLEKHG6Q3KR16 790 aa13.54□□□□□ -0.24
SNX12-205ENST00000490561 GLE1Q53GS7 698 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms