RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 MAVSQ7Z434 540 aa5.42□□□□□ -1.54
SSX2IP-208ENST00000490476 TMTC1Q8IUR5 882 aa5.42□□□□□ -1.54
SSX2IP-208ENST00000490476 TMEM57Q8N5G2 664 aa5.42□□□□□ -1.54
SSX2IP-208ENST00000490476 MYCBPAPQ8TBZ2 947 aa5.42□□□□□ -1.54
SSX2IP-208ENST00000490476 CPT1BQ92523 772 aa5.42□□□□□ -1.54
SSX2IP-208ENST00000490476 RSC1A1Q92681 617 aa5.42□□□□□ -1.54
SSX2IP-208ENST00000490476 FKBP10Q96AY3 582 aa5.42□□□□□ -1.54
SSX2IP-208ENST00000490476 NUDT22Q9BRQ3 303 aa5.42□□□□□ -1.54
SSX2IP-208ENST00000490476 MECRQ9BV79 373 aa5.42□□□□□ -1.54
SSX2IP-208ENST00000490476 SLC26A6Q9BXS9 759 aa5.42□□□□□ -1.54
SSX2IP-208ENST00000490476 KLC2Q9H0B6 622 aa5.42□□□□□ -1.54
SSX2IP-208ENST00000490476 TMX4Q9H1E5 349 aaPredicted RBP5.42□□□□□ -1.54
SSX2IP-208ENST00000490476 CCDC134Q9H6E4 229 aa5.42□□□□□ -1.54
SSX2IP-208ENST00000490476 SMC4Q9NTJ3 1288 aa5.42□□□□□ -1.54
SSX2IP-208ENST00000490476 TBCCD1Q9NVR7 557 aa5.42□□□□□ -1.54
SSX2IP-208ENST00000490476 PARPBPQ9NWS1 579 aa5.42□□□□□ -1.54
SSX2IP-208ENST00000490476 ANKFY1Q9P2R3 1169 aa5.42□□□□□ -1.54
SSX2IP-208ENST00000490476 NKX1-2Q9UD57 310 aaPredicted RBP5.42□□□□□ -1.54
SSX2IP-208ENST00000490476 STEAP1Q9UHE8 339 aa5.42□□□□□ -1.54
SSX2IP-208ENST00000490476 GJD2Q9UKL4 321 aa5.42□□□□□ -1.54
SSX2IP-208ENST00000490476 C19orf53Q9UNZ5 99 aaPredicted RBP5.42□□□□□ -1.54
SSX2IP-208ENST00000490476 LRRC37AA6NMS7 1700 aa5.42□□□□□ -1.54
SSX2IP-208ENST00000490476 LOC400499M0QZD8 3231 aa5.42□□□□□ -1.54
SSX2IP-208ENST00000490476 RALGAPA2Q2PPJ7 1873 aa5.41□□□□□ -1.54
SSX2IP-208ENST00000490476 ITPR1Q14643 2758 aa5.41□□□□□ -1.54
SSX2IP-208ENST00000490476 CCL15-CCL14A0A0B4J2E2 113 aa5.41□□□□□ -1.54
SSX2IP-208ENST00000490476 A0A0G2JLL6 359 aaPredicted RBP5.41□□□□□ -1.54
SSX2IP-208ENST00000490476 EFCAB8A8MWE9 144 aa5.41□□□□□ -1.54
SSX2IP-208ENST00000490476 MUSKO15146 869 aa5.41□□□□□ -1.54
SSX2IP-208ENST00000490476 SLC16A3O15427 465 aaKnown RBP5.41□□□□□ -1.54
SSX2IP-208ENST00000490476 DHHO43323 396 aa5.41□□□□□ -1.54
SSX2IP-208ENST00000490476 RHOBTB3O94955 611 aa5.41□□□□□ -1.54
SSX2IP-208ENST00000490476 TK1P04183 234 aa5.41□□□□□ -1.54
SSX2IP-208ENST00000490476 CHRM2P08172 466 aa5.41□□□□□ -1.54
SSX2IP-208ENST00000490476 TMEM225BP0DP42 221 aa5.41□□□□□ -1.54
SSX2IP-208ENST00000490476 CD19P15391 556 aa5.41□□□□□ -1.54
SSX2IP-208ENST00000490476 ZFP36P26651 326 aaKnown RBP5.41□□□□□ -1.54
SSX2IP-208ENST00000490476 SERPINA4P29622 427 aa5.41□□□□□ -1.54
SSX2IP-208ENST00000490476 LIPAP38571 399 aa5.41□□□□□ -1.54
SSX2IP-208ENST00000490476 RBM5P52756 815 aaKnown RBP eCLIP5.41□□□□□ -1.54
SSX2IP-208ENST00000490476 SEC24CP53992 1094 aa5.41□□□□□ -1.54
SSX2IP-208ENST00000490476 ADAM17P78536 824 aa5.41□□□□□ -1.54
SSX2IP-208ENST00000490476 SLC25A3Q00325 362 aa5.41□□□□□ -1.54
SSX2IP-208ENST00000490476 ACOX1Q15067 660 aa5.41□□□□□ -1.54
SSX2IP-208ENST00000490476 CCL15Q16663 113 aa5.41□□□□□ -1.54
SSX2IP-208ENST00000490476 NRN1LQ496H8 165 aa5.41□□□□□ -1.54
SSX2IP-208ENST00000490476 GALNTL6Q49A17 601 aa5.41□□□□□ -1.54
SSX2IP-208ENST00000490476 CRY2Q49AN0 593 aa5.41□□□□□ -1.54
SSX2IP-208ENST00000490476 USP39Q53GS9 565 aaKnown RBP5.41□□□□□ -1.54
SSX2IP-208ENST00000490476 ZNF569Q5MCW4 686 aa5.41□□□□□ -1.54
SSX2IP-208ENST00000490476 INTS11Q5TA45 600 aaKnown RBP5.41□□□□□ -1.54
SSX2IP-208ENST00000490476 ANKRD40Q6AI12 368 aa5.41□□□□□ -1.54
SSX2IP-208ENST00000490476 MSANTD2Q6P1R3 559 aa5.41□□□□□ -1.54
SSX2IP-208ENST00000490476 RSRC2Q7L4I2 434 aaKnown RBP5.41□□□□□ -1.54
SSX2IP-208ENST00000490476 GPR149Q86SP6 731 aa5.41□□□□□ -1.54
SSX2IP-208ENST00000490476 DTX2Q86UW9 622 aa5.41□□□□□ -1.54
SSX2IP-208ENST00000490476 IL17DQ8TAD2 202 aa5.41□□□□□ -1.54
SSX2IP-208ENST00000490476 SLC22A17Q8WUG5 538 aa5.41□□□□□ -1.54
SSX2IP-208ENST00000490476 SLC25A43Q8WUT9 341 aaPredicted RBP5.41□□□□□ -1.54
SSX2IP-208ENST00000490476 BADQ92934 168 aa5.41□□□□□ -1.54
SSX2IP-208ENST00000490476 SKA1Q96BD8 255 aa5.41□□□□□ -1.54
SSX2IP-208ENST00000490476 C8orf49Q96NF6 230 aa5.41□□□□□ -1.54
SSX2IP-208ENST00000490476 WDR24Q96S15 920 aa5.41□□□□□ -1.54
SSX2IP-208ENST00000490476 TTPALQ9BTX7 342 aa5.41□□□□□ -1.54
SSX2IP-208ENST00000490476 AURKAIP1Q9NWT8 199 aaPredicted RBP5.41□□□□□ -1.54
SSX2IP-208ENST00000490476 DKK3Q9UBP4 350 aa5.41□□□□□ -1.54
SSX2IP-208ENST00000490476 GABRQQ9UN88 632 aa5.41□□□□□ -1.54
SSX2IP-208ENST00000490476 RRP7AQ9Y3A4 280 aaKnown RBP5.41□□□□□ -1.54
SSX2IP-208ENST00000490476 COL4A1P02462 1669 aa5.4□□□□□ -1.54
SSX2IP-208ENST00000490476 A6NLC8 198 aa5.4□□□□□ -1.54
SSX2IP-208ENST00000490476 K7ESM1 405 aa5.4□□□□□ -1.54
SSX2IP-208ENST00000490476 MBD4O95243 580 aa5.4□□□□□ -1.54
SSX2IP-208ENST00000490476 ITGAMP11215 1152 aa5.4□□□□□ -1.54
SSX2IP-208ENST00000490476 PEPDP12955 493 aa5.4□□□□□ -1.54
SSX2IP-208ENST00000490476 HOXA5P20719 270 aa5.4□□□□□ -1.54
SSX2IP-208ENST00000490476 DDIT3P35638 169 aa5.4□□□□□ -1.54
SSX2IP-208ENST00000490476 BMPR1AP36894 532 aa5.4□□□□□ -1.54
SSX2IP-208ENST00000490476 ZEB1P37275 1124 aaPredicted RBP5.4□□□□□ -1.54
SSX2IP-208ENST00000490476 TUBP50607 506 aa5.4□□□□□ -1.54
SSX2IP-208ENST00000490476 ITIH3Q06033 890 aa5.4□□□□□ -1.54
SSX2IP-208ENST00000490476 TRPC3Q13507 836 aa5.4□□□□□ -1.54
SSX2IP-208ENST00000490476 SIM2Q14190 667 aaPredicted RBP5.4□□□□□ -1.54
SSX2IP-208ENST00000490476 TTC22Q5TAA0 569 aa5.4□□□□□ -1.54
SSX2IP-208ENST00000490476 RETSATQ6NUM9 610 aa5.4□□□□□ -1.54
SSX2IP-208ENST00000490476 ARMC6Q6NXE6 501 aa5.4□□□□□ -1.54
SSX2IP-208ENST00000490476 C17orf99Q6UX52 265 aa5.4□□□□□ -1.54
SSX2IP-208ENST00000490476 CCDC129Q6ZRS4 1044 aa5.4□□□□□ -1.54
SSX2IP-208ENST00000490476 PIK3AP1Q6ZUJ8 805 aa5.4□□□□□ -1.54
SSX2IP-208ENST00000490476 TRABD2AQ86V40 505 aa5.4□□□□□ -1.54
SSX2IP-208ENST00000490476 KIAA2013Q8IYS2 634 aa5.4□□□□□ -1.54
SSX2IP-208ENST00000490476 FBXL20Q96IG2 436 aa5.4□□□□□ -1.54
SSX2IP-208ENST00000490476 WASH6PQ9NQA3 447 aa5.4□□□□□ -1.54
SSX2IP-208ENST00000490476 FBXO28Q9NVF7 368 aa5.4□□□□□ -1.54
SSX2IP-208ENST00000490476 TERF2IPQ9NYB0 399 aa5.4□□□□□ -1.54
SSX2IP-208ENST00000490476 MAP3K20Q9NYL2 800 aaKnown RBP5.4□□□□□ -1.54
SSX2IP-208ENST00000490476 NDUFAF4Q9P032 175 aa5.4□□□□□ -1.54
SSX2IP-208ENST00000490476 CEP72Q9P209 647 aa5.4□□□□□ -1.54
SSX2IP-208ENST00000490476 PCDHB2Q9Y5E7 798 aa5.4□□□□□ -1.54
SSX2IP-208ENST00000490476 GAKO14976 1311 aa5.4□□□□□ -1.55
SSX2IP-208ENST00000490476 CENPJQ9HC77 1338 aaPredicted RBP5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms