RNA–Protein interactions for RNA: ENST00000490112.1

UBP1-211, Transcript of upstream binding protein 1, humanhuman

TSL 5

Gene UBP1, Length 633 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-211ENST00000490112 CHSY1Q86X52 802 aa11.03□□□□□ -0.64
UBP1-211ENST00000490112 LGI2Q8N0V4 545 aa11.03□□□□□ -0.64
UBP1-211ENST00000490112 CFAP52Q8N1V2 620 aa11.03□□□□□ -0.64
UBP1-211ENST00000490112 OR14C36Q8NHC7 312 aa11.03□□□□□ -0.64
UBP1-211ENST00000490112 LMO3Q8TAP4 145 aa11.03□□□□□ -0.64
UBP1-211ENST00000490112 SAP25Q8TEE9 199 aa11.03□□□□□ -0.64
UBP1-211ENST00000490112 HNRNPLLQ8WVV9 542 aaKnown RBP11.03□□□□□ -0.64
UBP1-211ENST00000490112 NXPE2Q96DL1 559 aa11.03□□□□□ -0.64
UBP1-211ENST00000490112 SERAC1Q96JX3 654 aa11.03□□□□□ -0.64
UBP1-211ENST00000490112 SLC6A18Q96N87 628 aa11.03□□□□□ -0.64
UBP1-211ENST00000490112 SPAG5Q96R06 1193 aa11.03□□□□□ -0.64
UBP1-211ENST00000490112 FAM129BQ96TA1 746 aa11.03□□□□□ -0.64
UBP1-211ENST00000490112 ZSWIM1Q9BR11 485 aa11.03□□□□□ -0.64
UBP1-211ENST00000490112 MTG2Q9H4K7 406 aa11.03□□□□□ -0.64
UBP1-211ENST00000490112 THAP9Q9H5L6 903 aa11.03□□□□□ -0.64
UBP1-211ENST00000490112 SERGEFQ9UGK8 458 aa11.03□□□□□ -0.64
UBP1-211ENST00000490112 NAALADL1Q9UQQ1 740 aa11.03□□□□□ -0.64
UBP1-211ENST00000490112 GCN1Q92616 2671 aaKnown RBP11.03□□□□□ -0.64
UBP1-211ENST00000490112 GOLGA4Q13439 2230 aaKnown RBP11.03□□□□□ -0.64
UBP1-211ENST00000490112 URB1O60287 2271 aaKnown RBP11.02□□□□□ -0.64
UBP1-211ENST00000490112 KALRNO60229 2985 aa11.02□□□□□ -0.64
UBP1-211ENST00000490112 TBC1D3DA0A087WVF3 549 aa11.02□□□□□ -0.65
UBP1-211ENST00000490112 TBC1D3IA0A087WXS9 549 aa11.02□□□□□ -0.65
UBP1-211ENST00000490112 TBC1D3EA0A087X179 549 aa11.02□□□□□ -0.65
UBP1-211ENST00000490112 TBC1D3KA0A087X1G2 549 aa11.02□□□□□ -0.65
UBP1-211ENST00000490112 TBC1D3FA6NER0 549 aaPredicted RBP11.02□□□□□ -0.65
UBP1-211ENST00000490112 KCNU1A8MYU2 1149 aa11.02□□□□□ -0.65
UBP1-211ENST00000490112 C10orf142B7Z368 130 aa11.02□□□□□ -0.65
UBP1-211ENST00000490112 TBC1D3LB9A6J9 549 aa11.02□□□□□ -0.65
UBP1-211ENST00000490112 TLR4O00206 839 aa11.02□□□□□ -0.65
UBP1-211ENST00000490112 RFPL3O75679 317 aa11.02□□□□□ -0.65
UBP1-211ENST00000490112 FGFR1OPO95684 399 aaKnown RBP11.02□□□□□ -0.65
UBP1-211ENST00000490112 TRUB2O95900 331 aaKnown RBP11.02□□□□□ -0.65
UBP1-211ENST00000490112 IL1BP01584 269 aa11.02□□□□□ -0.65
UBP1-211ENST00000490112 GLI1P08151 1106 aa11.02□□□□□ -0.65
UBP1-211ENST00000490112 TBC1D3HP0C7X1 549 aa11.02□□□□□ -0.65
UBP1-211ENST00000490112 KRT5P13647 590 aa11.02□□□□□ -0.65
UBP1-211ENST00000490112 JUPP14923 745 aa11.02□□□□□ -0.65
UBP1-211ENST00000490112 TACR2P21452 398 aa11.02□□□□□ -0.65
UBP1-211ENST00000490112 CCR1P32246 355 aa11.02□□□□□ -0.65
UBP1-211ENST00000490112 RXRGP48443 463 aa11.02□□□□□ -0.65
UBP1-211ENST00000490112 PSMD8P48556 350 aa11.02□□□□□ -0.65
UBP1-211ENST00000490112 ADPRHP54922 357 aa11.02□□□□□ -0.65
UBP1-211ENST00000490112 SNX16P57768 344 aa11.02□□□□□ -0.65
UBP1-211ENST00000490112 IL9RQ01113 521 aa11.02□□□□□ -0.65
UBP1-211ENST00000490112 CCDC15Q0P6D6 951 aa11.02□□□□□ -0.65
UBP1-211ENST00000490112 KCNH2Q12809 1159 aa11.02□□□□□ -0.65
UBP1-211ENST00000490112 CCDC157Q569K6 752 aa11.02□□□□□ -0.65
UBP1-211ENST00000490112 ZC3H12AQ5D1E8 599 aaKnown RBP11.02□□□□□ -0.65
UBP1-211ENST00000490112 TBC1D3GQ6DHY5 549 aa11.02□□□□□ -0.65
UBP1-211ENST00000490112 TBC1D3CQ6IPX1 549 aa11.02□□□□□ -0.65
UBP1-211ENST00000490112 LAYNQ6UX15 382 aa11.02□□□□□ -0.65
UBP1-211ENST00000490112 TMEM110Q86TL2 294 aa11.02□□□□□ -0.65
UBP1-211ENST00000490112 TAC4Q86UU9 113 aa11.02□□□□□ -0.65
UBP1-211ENST00000490112 TBC1D3Q8IZP1 549 aaPredicted RBP11.02□□□□□ -0.65
UBP1-211ENST00000490112 MFSD2AQ8NA29 543 aa11.02□□□□□ -0.65
UBP1-211ENST00000490112 PTPRN2Q92932 1015 aa11.02□□□□□ -0.65
UBP1-211ENST00000490112 CNDP2Q96KP4 475 aaKnown RBP11.02□□□□□ -0.65
UBP1-211ENST00000490112 SLC6A16Q9GZN6 736 aa11.02□□□□□ -0.65
UBP1-211ENST00000490112 TMEM51Q9NW97 253 aa11.02□□□□□ -0.65
UBP1-211ENST00000490112 SLCO3A1Q9UIG8 710 aa11.02□□□□□ -0.65
UBP1-211ENST00000490112 DMTF1Q9Y222 760 aa11.02□□□□□ -0.65
UBP1-211ENST00000490112 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.02□□□□□ -0.65
UBP1-211ENST00000490112 PLXNA2O75051 1894 aa11.02□□□□□ -0.65
UBP1-211ENST00000490112 A0A1B0GVM2 712 aa11.01□□□□□ -0.65
UBP1-211ENST00000490112 A0A1W2PR77 199 aa11.01□□□□□ -0.65
UBP1-211ENST00000490112 FAM149AA5PLN7 773 aa11.01□□□□□ -0.65
UBP1-211ENST00000490112 TCAF2A6NFQ2 919 aa11.01□□□□□ -0.65
UBP1-211ENST00000490112 ALOX15BO15296 676 aa11.01□□□□□ -0.65
UBP1-211ENST00000490112 LATO43561 262 aa11.01□□□□□ -0.65
UBP1-211ENST00000490112 RNGTTO60942 597 aaKnown RBP11.01□□□□□ -0.65
UBP1-211ENST00000490112 IGLV3-25P01717 112 aa11.01□□□□□ -0.65
UBP1-211ENST00000490112 AFPP02771 609 aaKnown RBP11.01□□□□□ -0.65
UBP1-211ENST00000490112 MZF1P28698 734 aaPredicted RBP11.01□□□□□ -0.65
UBP1-211ENST00000490112 EPHA8P29322 1005 aaPredicted RBP11.01□□□□□ -0.65
UBP1-211ENST00000490112 CTSOP43234 321 aaPredicted RBP11.01□□□□□ -0.65
UBP1-211ENST00000490112 PLK1P53350 603 aa11.01□□□□□ -0.65
UBP1-211ENST00000490112 MARSP56192 900 aaKnown RBP11.01□□□□□ -0.65
UBP1-211ENST00000490112 NXPH1P58417 271 aa11.01□□□□□ -0.65
UBP1-211ENST00000490112 CDK17Q00537 523 aa11.01□□□□□ -0.65
UBP1-211ENST00000490112 KCNJ12Q14500 433 aa11.01□□□□□ -0.65
UBP1-211ENST00000490112 SOWAHCQ53LP3 525 aaPredicted RBP11.01□□□□□ -0.65
UBP1-211ENST00000490112 EFHC1Q5JVL4 640 aa11.01□□□□□ -0.65
UBP1-211ENST00000490112 SYPL2Q5VXT5 272 aa11.01□□□□□ -0.65
UBP1-211ENST00000490112 RAP1GAP2Q684P5 730 aa11.01□□□□□ -0.65
UBP1-211ENST00000490112 NAPEPLDQ6IQ20 393 aa11.01□□□□□ -0.65
UBP1-211ENST00000490112 TTI2Q6NXR4 508 aa11.01□□□□□ -0.65
UBP1-211ENST00000490112 MMS22LQ6ZRQ5 1243 aa11.01□□□□□ -0.65
UBP1-211ENST00000490112 GATAD2AQ86YP4 633 aa11.01□□□□□ -0.65
UBP1-211ENST00000490112 TRIM59Q8IWR1 403 aa11.01□□□□□ -0.65
UBP1-211ENST00000490112 CCAR2Q8N163 923 aaKnown RBP11.01□□□□□ -0.65
UBP1-211ENST00000490112 STK40Q8N2I9 435 aa11.01□□□□□ -0.65
UBP1-211ENST00000490112 AADATQ8N5Z0 425 aa11.01□□□□□ -0.65
UBP1-211ENST00000490112 ADAM32Q8TC27 787 aa11.01□□□□□ -0.65
UBP1-211ENST00000490112 ZNF606Q8WXB4 792 aa11.01□□□□□ -0.65
UBP1-211ENST00000490112 OR8D1Q8WZ84 308 aa11.01□□□□□ -0.65
UBP1-211ENST00000490112 ERCC4Q92889 916 aaPredicted RBP11.01□□□□□ -0.65
UBP1-211ENST00000490112 KAT5Q92993 513 aa11.01□□□□□ -0.65
UBP1-211ENST00000490112 LRIG1Q96JA1 1093 aa11.01□□□□□ -0.65
UBP1-211ENST00000490112 RPL10LQ96L21 214 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms