RNA–Protein interactions for RNA: ENST00000490101.1

SRM-206, Transcript of spermidine synthase, human

TSL 2

Gene SRM, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRM-206	ENST00000490101	DPYS	Q14117	519 aa		18.68	■□□□□ 0.58
SRM-206	ENST00000490101	PDGFRL	Q15198	375 aa		18.68	■□□□□ 0.58
SRM-206	ENST00000490101	TMEM196	Q5HYL7	178 aa		18.68	■□□□□ 0.58
SRM-206	ENST00000490101	ARTN	Q5T4W7	220 aa		18.68	■□□□□ 0.58
SRM-206	ENST00000490101	NAIF1	Q69YI7	327 aa	Predicted RBP	18.68	■□□□□ 0.58
SRM-206	ENST00000490101	C12orf50	Q8NA57	414 aa	Predicted RBP	18.68	■□□□□ 0.58
SRM-206	ENST00000490101	TTC13	Q8NBP0	860 aa		18.68	■□□□□ 0.58
SRM-206	ENST00000490101	CHFR	Q96EP1	664 aa		18.68	■□□□□ 0.58
SRM-206	ENST00000490101	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	18.68	■□□□□ 0.58
SRM-206	ENST00000490101	SIK2	Q9H0K1	926 aa		18.68	■□□□□ 0.58
SRM-206	ENST00000490101	XPO7	Q9UIA9	1087 aa	Known RBP	18.68	■□□□□ 0.58
SRM-206	ENST00000490101	SNX10	Q9Y5X0	201 aa		18.68	■□□□□ 0.58
SRM-206	ENST00000490101	HS3ST4	Q9Y661	456 aa		18.68	■□□□□ 0.58
SRM-206	ENST00000490101	ATG2B	Q96BY7	2078 aa		18.67	■□□□□ 0.58
SRM-206	ENST00000490101	CREB3	O43889	395 aa		18.67	■□□□□ 0.58
SRM-206	ENST00000490101	RNF40	O75150	1001 aa		18.67	■□□□□ 0.58
SRM-206	ENST00000490101	LRIG2	O94898	1065 aa		18.67	■□□□□ 0.58
SRM-206	ENST00000490101	LATS1	O95835	1130 aa		18.67	■□□□□ 0.58
SRM-206	ENST00000490101	EGF	P01133	1207 aa		18.67	■□□□□ 0.58
SRM-206	ENST00000490101	IFNAR2	P48551	515 aa		18.67	■□□□□ 0.58
SRM-206	ENST00000490101	TPI1	P60174	286 aa		18.67	■□□□□ 0.58
SRM-206	ENST00000490101	CCNG2	Q16589	344 aa		18.67	■□□□□ 0.58
SRM-206	ENST00000490101	PIK3R6	Q5UE93	754 aa		18.67	■□□□□ 0.58
SRM-206	ENST00000490101	RFX8	Q6ZV50	586 aa		18.67	■□□□□ 0.58
SRM-206	ENST00000490101	WDR5B	Q86VZ2	330 aa		18.67	■□□□□ 0.58
SRM-206	ENST00000490101	CPA6	Q8N4T0	437 aa		18.67	■□□□□ 0.58
SRM-206	ENST00000490101	PLD5	Q8N7P1	536 aa		18.67	■□□□□ 0.58
SRM-206	ENST00000490101	NOA1	Q8NC60	698 aa	Known RBP	18.67	■□□□□ 0.58
SRM-206	ENST00000490101	MYRIP	Q8NFW9	859 aa		18.67	■□□□□ 0.58
SRM-206	ENST00000490101	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	18.67	■□□□□ 0.58
SRM-206	ENST00000490101	DCLK3	Q9C098	648 aa		18.67	■□□□□ 0.58
SRM-206	ENST00000490101	LRRC19	Q9H756	370 aa		18.67	■□□□□ 0.58
SRM-206	ENST00000490101	FBRSL1	Q9HCM7	1045 aa	Known RBP	18.67	■□□□□ 0.58
SRM-206	ENST00000490101	ARHGEF4	Q9NR80	690 aa		18.67	■□□□□ 0.58
SRM-206	ENST00000490101	SEMA4G	Q9NTN9	838 aa		18.67	■□□□□ 0.58
SRM-206	ENST00000490101	POLR3B	Q9NW08	1133 aa	Predicted RBP	18.67	■□□□□ 0.58
SRM-206	ENST00000490101	DUS2	Q9NX74	493 aa	Known RBP	18.67	■□□□□ 0.58
SRM-206	ENST00000490101	SLC8A2	Q9UPR5	921 aa		18.67	■□□□□ 0.58
SRM-206	ENST00000490101	R3HDM2	Q9Y2K5	976 aa	Known RBP	18.67	■□□□□ 0.58
SRM-206	ENST00000490101	WNT6	Q9Y6F9	365 aa		18.67	■□□□□ 0.58
SRM-206	ENST00000490101	DCDC2B	A2VCK2	349 aa		18.66	■□□□□ 0.58
SRM-206	ENST00000490101	APOC4-APOC2	K7ER74	178 aa		18.66	■□□□□ 0.58
SRM-206	ENST00000490101	TRDMT1	O14717	391 aa	Known RBP	18.66	■□□□□ 0.58
SRM-206	ENST00000490101	APOL1	O14791	398 aa		18.66	■□□□□ 0.58
SRM-206	ENST00000490101	ACSL4	O60488	711 aa		18.66	■□□□□ 0.58
SRM-206	ENST00000490101	PHF2	O75151	1096 aa		18.66	■□□□□ 0.58
SRM-206	ENST00000490101	APOC2	P02655	101 aa		18.66	■□□□□ 0.58
SRM-206	ENST00000490101	KLKB1	P03952	638 aa		18.66	■□□□□ 0.58
SRM-206	ENST00000490101	TGM2	P21980	687 aa		18.66	■□□□□ 0.58
SRM-206	ENST00000490101	AMPD1	P23109	780 aa		18.66	■□□□□ 0.58
SRM-206	ENST00000490101	SLC11A2	P49281	568 aa		18.66	■□□□□ 0.58
SRM-206	ENST00000490101	GALK1	P51570	392 aa		18.66	■□□□□ 0.58
SRM-206	ENST00000490101	ZNF77	Q15935	545 aa		18.66	■□□□□ 0.58
SRM-206	ENST00000490101	MS4A13	Q5J8X5	152 aa		18.66	■□□□□ 0.58
SRM-206	ENST00000490101	ZNF683	Q8IZ20	524 aa		18.66	■□□□□ 0.58
SRM-206	ENST00000490101	FAM160A2	Q8N612	972 aa	Predicted RBP	18.66	■□□□□ 0.58
SRM-206	ENST00000490101	SH3RF2	Q8TEC5	729 aa		18.66	■□□□□ 0.58
SRM-206	ENST00000490101	MAGOHB	Q96A72	148 aa	Known RBP	18.66	■□□□□ 0.58
SRM-206	ENST00000490101	PRMT1	Q99873	361 aa	Known RBP	18.66	■□□□□ 0.58
SRM-206	ENST00000490101	P2RY13	Q9BPV8	354 aa		18.66	■□□□□ 0.58
SRM-206	ENST00000490101	SMPD4	Q9NXE4	827 aa		18.66	■□□□□ 0.58
SRM-206	ENST00000490101	STIM2	Q9P246	746 aa		18.66	■□□□□ 0.58
SRM-206	ENST00000490101	ARHGAP26	Q9UNA1	814 aa		18.66	■□□□□ 0.58
SRM-206	ENST00000490101	CPQ	Q9Y646	472 aa		18.66	■□□□□ 0.58
SRM-206	ENST00000490101	SDK1	Q7Z5N4	2213 aa		18.66	■□□□□ 0.58
SRM-206	ENST00000490101	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	18.65	■□□□□ 0.58
SRM-206	ENST00000490101	DCLK1	O15075	740 aa		18.65	■□□□□ 0.58
SRM-206	ENST00000490101	DAPK3	O43293	454 aa		18.65	■□□□□ 0.58
SRM-206	ENST00000490101	ATG13	O75143	517 aa		18.65	■□□□□ 0.58
SRM-206	ENST00000490101	CORO1A	P31146	461 aa	Known RBP	18.65	■□□□□ 0.58
SRM-206	ENST00000490101	CHRNA3	P32297	505 aa		18.65	■□□□□ 0.58
SRM-206	ENST00000490101	GJA4	P35212	333 aa		18.65	■□□□□ 0.58
SRM-206	ENST00000490101	DYNLT1	P63172	113 aa		18.65	■□□□□ 0.58
SRM-206	ENST00000490101	USP4	Q13107	963 aa		18.65	■□□□□ 0.58
SRM-206	ENST00000490101	AUH	Q13825	339 aa	Known RBP	18.65	■□□□□ 0.58
SRM-206	ENST00000490101	DRICH1	Q6PGQ1	229 aa	Predicted RBP	18.65	■□□□□ 0.58
SRM-206	ENST00000490101	C14orf80	Q86SX3	495 aa		18.65	■□□□□ 0.58
SRM-206	ENST00000490101	OSCP1	Q8WVF1	389 aa		18.65	■□□□□ 0.58
SRM-206	ENST00000490101	C1orf54	Q8WWF1	131 aa		18.65	■□□□□ 0.58
SRM-206	ENST00000490101	TBC1D31	Q96DN5	1066 aa		18.65	■□□□□ 0.58
SRM-206	ENST00000490101	ECT2	Q9H8V3	914 aa		18.65	■□□□□ 0.58
SRM-206	ENST00000490101	STOML2	Q9UJZ1	356 aa		18.65	■□□□□ 0.58
SRM-206	ENST00000490101	NEU3	Q9UQ49	428 aa		18.65	■□□□□ 0.58
SRM-206	ENST00000490101	IGLV3-10	A0A075B6K4	115 aa		18.64	■□□□□ 0.57
SRM-206	ENST00000490101	DRGX	A6NNA5	263 aa		18.64	■□□□□ 0.57
SRM-206	ENST00000490101		E9PAM4	449 aa		18.64	■□□□□ 0.57
SRM-206	ENST00000490101	FGF10	O15520	208 aa	Predicted RBP	18.64	■□□□□ 0.57
SRM-206	ENST00000490101	GREM1	O60565	184 aa		18.64	■□□□□ 0.57
SRM-206	ENST00000490101	LRP3	O75074	770 aa		18.64	■□□□□ 0.57
SRM-206	ENST00000490101	ERCC2	P18074	760 aa		18.64	■□□□□ 0.57
SRM-206	ENST00000490101	DRD1	P21728	446 aa		18.64	■□□□□ 0.57
SRM-206	ENST00000490101	EPHB2	P29323	1055 aa		18.64	■□□□□ 0.57
SRM-206	ENST00000490101	HOXA6	P31267	233 aa		18.64	■□□□□ 0.57
SRM-206	ENST00000490101	COIL	P38432	576 aa	Predicted RBP	18.64	■□□□□ 0.57
SRM-206	ENST00000490101	GGCX	P38435	758 aa		18.64	■□□□□ 0.57
SRM-206	ENST00000490101	FNTA	P49354	379 aa		18.64	■□□□□ 0.57
SRM-206	ENST00000490101	ZXDB	P98169	803 aa		18.64	■□□□□ 0.57
SRM-206	ENST00000490101	PAFAH1B3	Q15102	231 aa	Known RBP	18.64	■□□□□ 0.57
SRM-206	ENST00000490101	NADSYN1	Q6IA69	706 aa		18.64	■□□□□ 0.57
SRM-206	ENST00000490101	LRRC31	Q6UY01	552 aa		18.64	■□□□□ 0.57

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